Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
RPA1P27694 Y_RNA.105-201ENST00000363182 111 ntBASIC1.28□□□□□ -2.2
RPA1P27694 RNU6-626P-201ENST00000363354 107 ntBASIC1.28□□□□□ -2.2
RPA1P27694 RNU6-392P-201ENST00000364926 101 ntBASIC1.28□□□□□ -2.2
RPA1P27694 SNORA22B-201ENST00000383876 138 ntBASIC1.28□□□□□ -2.2
RPA1P27694 Y_RNA.498-201ENST00000384460 102 ntBASIC1.28□□□□□ -2.2
RPA1P27694 RNU11-5P-201ENST00000391216 129 ntBASIC1.28□□□□□ -2.2
RPA1P27694 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.28□□□□□ -2.2
RPA1P27694 AC099799.1-201ENST00000439809 192 ntBASIC1.28□□□□□ -2.2
RPA1P27694 AC093852.1-201ENST00000503587 266 ntBASIC1.28□□□□□ -2.2
RPA1P27694 RN7SKP295-201ENST00000517264 153 ntBASIC1.28□□□□□ -2.2
RPA1P27694 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.28□□□□□ -2.2
RPA1P27694 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.28□□□□□ -2.2
RPA1P27694 AL512310.8-201ENST00000550183 120 ntBASIC1.28□□□□□ -2.2
RPA1P27694 VN1R91P-201ENST00000594377 169 ntBASIC1.28□□□□□ -2.2
RPA1P27694 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.28□□□□□ -2.2
RPA1P27694 U6.73-201ENST00000619194 103 ntBASIC1.28□□□□□ -2.2
RPA1P27694 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.28□□□□□ -2.2
RPA1P27694 MIR3674-201ENST00000636576 68 ntBASIC1.28□□□□□ -2.2
RPA1P27694 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.27□□□□□ -2.21
RPA1P27694 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
RPA1P27694 MIR410-201ENST00000362222 80 ntBASIC1.27□□□□□ -2.21
RPA1P27694 SNORD81.1-201ENST00000363064 77 ntBASIC1.27□□□□□ -2.21
RPA1P27694 SNORD115-30-201ENST00000364117 82 ntBASIC1.27□□□□□ -2.21
RPA1P27694 Y_RNA.338-201ENST00000365320 114 ntBASIC1.27□□□□□ -2.21
RPA1P27694 RNU6-53P-201ENST00000365367 106 ntBASIC1.27□□□□□ -2.21
RPA1P27694 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.27□□□□□ -2.21
RPA1P27694 RNU6-1264P-201ENST00000383891 107 ntBASIC1.27□□□□□ -2.21
RPA1P27694 RNU6-1031P-201ENST00000384773 107 ntBASIC1.27□□□□□ -2.21
RPA1P27694 RNU6-321P-201ENST00000410912 106 ntBASIC1.27□□□□□ -2.21
RPA1P27694 AC022028.1-201ENST00000412054 408 ntBASIC1.27□□□□□ -2.21
RPA1P27694 AL591704.2-201ENST00000421658 181 ntBASIC1.27□□□□□ -2.21
RPA1P27694 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.27□□□□□ -2.21
RPA1P27694 RNU6-976P-201ENST00000516086 111 ntBASIC1.27□□□□□ -2.21
RPA1P27694 RNU6-1046P-201ENST00000516538 107 ntBASIC1.27□□□□□ -2.21
RPA1P27694 RNU7-4P-201ENST00000516961 62 ntBASIC1.27□□□□□ -2.21
RPA1P27694 RNU2-12P-201ENST00000517216 168 ntBASIC1.27□□□□□ -2.21
RPA1P27694 AC144568.1-201ENST00000520139 137 ntBASIC1.27□□□□□ -2.21
RPA1P27694 AC136932.1-201ENST00000574771 208 ntBASIC1.27□□□□□ -2.21
RPA1P27694 AC133104.2-201ENST00000615272 193 ntBASIC1.27□□□□□ -2.21
RPA1P27694 AC022140.2-201ENST00000623500 188 ntBASIC1.27□□□□□ -2.21
RPA1P27694 AC006435.5-201ENST00000624486 112 ntBASIC1.27□□□□□ -2.21
RPA1P27694 Y_RNA.286-201ENST00000364813 102 ntBASIC1.26□□□□□ -2.21
RPA1P27694 RNU6-806P-201ENST00000365147 105 ntBASIC1.26□□□□□ -2.21
RPA1P27694 RNA5SP259-201ENST00000365541 109 ntBASIC1.26□□□□□ -2.21
RPA1P27694 SNORA70.7-201ENST00000384159 133 ntBASIC1.26□□□□□ -2.21
RPA1P27694 Y_RNA.445-201ENST00000384168 102 ntBASIC1.26□□□□□ -2.21
RPA1P27694 RNU6-937P-201ENST00000384325 106 ntBASIC1.26□□□□□ -2.21
RPA1P27694 SNORD116-13-201ENST00000384408 92 ntBASIC1.26□□□□□ -2.21
RPA1P27694 RNU6-136P-201ENST00000384663 107 ntBASIC1.26□□□□□ -2.21
RPA1P27694 MTCYBP6-201ENST00000441810 138 ntBASIC1.26□□□□□ -2.21
RPA1P27694 AC005840.1-201ENST00000498412 377 ntBASIC1.26□□□□□ -2.21
RPA1P27694 AC074133.1-201ENST00000515696 183 ntBASIC1.26□□□□□ -2.21
RPA1P27694 RNU7-99P-201ENST00000516271 62 ntBASIC1.26□□□□□ -2.21
RPA1P27694 Y_RNA.701-201ENST00000516812 110 ntBASIC1.26□□□□□ -2.21
RPA1P27694 MIR3664-201ENST00000579074 99 ntBASIC1.26□□□□□ -2.21
RPA1P27694 MIR3171-201ENST00000584270 74 ntBASIC1.26□□□□□ -2.21
RPA1P27694 AL929325.1-201ENST00000603096 117 ntBASIC1.26□□□□□ -2.21
RPA1P27694 AC005828.6-201ENST00000606610 232 ntBASIC1.26□□□□□ -2.21
RPA1P27694 AC090971.5-201ENST00000621102 293 ntBASIC1.26□□□□□ -2.21
RPA1P27694 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
RPA1P27694 Y_RNA.27-201ENST00000362540 103 ntBASIC1.25□□□□□ -2.21
RPA1P27694 SNORA27.1-201ENST00000362604 124 ntBASIC1.25□□□□□ -2.21
RPA1P27694 Y_RNA.243-201ENST00000364481 109 ntBASIC1.25□□□□□ -2.21
RPA1P27694 RNU6-407P-201ENST00000365280 104 ntBASIC1.25□□□□□ -2.21
RPA1P27694 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
RPA1P27694 RNU4-30P-201ENST00000410245 143 ntBASIC1.25□□□□□ -2.21
RPA1P27694 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.25□□□□□ -2.21
RPA1P27694 TOMM22P2-201ENST00000430735 237 ntBASIC1.25□□□□□ -2.21
RPA1P27694 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.25□□□□□ -2.21
RPA1P27694 UBE2V1P7-201ENST00000446395 340 ntBASIC1.25□□□□□ -2.21
RPA1P27694 MRPS10P1-201ENST00000448483 130 ntBASIC1.25□□□□□ -2.21
RPA1P27694 TRMT112P2-201ENST00000512910 132 ntBASIC1.25□□□□□ -2.21
RPA1P27694 RN7SKP179-201ENST00000516126 217 ntBASIC1.25□□□□□ -2.21
RPA1P27694 RNU6-397P-201ENST00000516226 104 ntBASIC1.25□□□□□ -2.21
RPA1P27694 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.25□□□□□ -2.21
RPA1P27694 AC019288.1-201ENST00000557918 224 ntBASIC1.25□□□□□ -2.21
RPA1P27694 CYP3A52P-201ENST00000563326 91 ntBASIC1.25□□□□□ -2.21
RPA1P27694 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.25□□□□□ -2.21
RPA1P27694 MIR4438-201ENST00000585271 93 ntBASIC1.25□□□□□ -2.21
RPA1P27694 AL390123.1-201ENST00000603216 237 ntBASIC1.25□□□□□ -2.21
RPA1P27694 AL365434.2-201ENST00000607979 234 ntBASIC1.25□□□□□ -2.21
RPA1P27694 AC021506.2-201ENST00000612354 169 ntBASIC1.25□□□□□ -2.21
RPA1P27694 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.25□□□□□ -2.21
RPA1P27694 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.25□□□□□ -2.21
RPA1P27694 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.25□□□□□ -2.21
RPA1P27694 AC090574.1-201ENST00000623186 233 ntBASIC1.25□□□□□ -2.21
RPA1P27694 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
RPA1P27694 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
RPA1P27694 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
RPA1P27694 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
RPA1P27694 RNU1-22P-201ENST00000363334 158 ntBASIC1.24□□□□□ -2.21
RPA1P27694 Y_RNA.143-201ENST00000363520 106 ntBASIC1.24□□□□□ -2.21
RPA1P27694 RNU1-115P-201ENST00000365329 160 ntBASIC1.24□□□□□ -2.21
RPA1P27694 RNU6-117P-201ENST00000365415 107 ntBASIC1.24□□□□□ -2.21
RPA1P27694 Y_RNA.361-201ENST00000365515 120 ntBASIC1.24□□□□□ -2.21
RPA1P27694 Y_RNA.446-201ENST00000384178 104 ntBASIC1.24□□□□□ -2.21
RPA1P27694 MRPL42P3-201ENST00000401492 326 ntBASIC1.24□□□□□ -2.21
RPA1P27694 AL034345.1-201ENST00000407768 123 ntBASIC1.24□□□□□ -2.21
RPA1P27694 RNU6-121P-201ENST00000410525 99 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms