Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC018630.2-201ENST00000534866 2403 ntBASIC1.56□□□□□ -2.16
CDH3P22223 Y_RNA.153-201ENST00000363615 91 ntBASIC1.55□□□□□ -2.16
CDH3P22223 Y_RNA.183-201ENST00000363882 113 ntBASIC1.55□□□□□ -2.16
CDH3P22223 RNU6-324P-201ENST00000363957 106 ntBASIC1.55□□□□□ -2.16
CDH3P22223 Y_RNA.380-201ENST00000365663 111 ntBASIC1.55□□□□□ -2.16
CDH3P22223 RNU6-360P-201ENST00000390944 104 ntBASIC1.55□□□□□ -2.16
CDH3P22223 AL390729.2-201ENST00000416137 156 ntBASIC1.55□□□□□ -2.16
CDH3P22223 AC108667.1-201ENST00000428618 249 ntBASIC1.55□□□□□ -2.16
CDH3P22223 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.55□□□□□ -2.16
CDH3P22223 snoU13.27-201ENST00000459278 104 ntBASIC1.55□□□□□ -2.16
CDH3P22223 SNORA31.10-201ENST00000516482 106 ntBASIC1.55□□□□□ -2.16
CDH3P22223 RNU6-63P-201ENST00000516690 95 ntBASIC1.55□□□□□ -2.16
CDH3P22223 RNU7-110P-201ENST00000516891 62 ntBASIC1.55□□□□□ -2.16
CDH3P22223 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.55□□□□□ -2.16
CDH3P22223 MIR4300-201ENST00000581016 96 ntBASIC1.55□□□□□ -2.16
CDH3P22223 AC091178.2-201ENST00000584401 117 ntBASIC1.55□□□□□ -2.16
CDH3P22223 AP000942.3-201ENST00000603702 160 ntBASIC1.55□□□□□ -2.16
CDH3P22223 AC011373.1-201ENST00000607270 237 ntBASIC1.55□□□□□ -2.16
CDH3P22223 AC127459.3-201ENST00000624328 466 ntBASIC1.55□□□□□ -2.16
CDH3P22223 MIR6079-201ENST00000635807 62 ntBASIC1.55□□□□□ -2.16
CDH3P22223 Y_RNA.172-201ENST00000363765 102 ntBASIC1.54□□□□□ -2.16
CDH3P22223 Y_RNA.286-201ENST00000364813 102 ntBASIC1.54□□□□□ -2.16
CDH3P22223 Y_RNA.329-201ENST00000365209 107 ntBASIC1.54□□□□□ -2.16
CDH3P22223 RNU6-639P-201ENST00000384074 107 ntBASIC1.54□□□□□ -2.16
CDH3P22223 SNORA17.3-201ENST00000391159 129 ntBASIC1.54□□□□□ -2.16
CDH3P22223 RNU6-121P-201ENST00000410525 99 ntBASIC1.54□□□□□ -2.16
CDH3P22223 AC245047.3-201ENST00000429428 127 ntBASIC1.54□□□□□ -2.16
CDH3P22223 HSPE1P13-201ENST00000451143 297 ntBASIC1.54□□□□□ -2.16
CDH3P22223 SNORA70.12-201ENST00000516084 153 ntBASIC1.54□□□□□ -2.16
CDH3P22223 RNU6-1337P-201ENST00000516525 95 ntBASIC1.54□□□□□ -2.16
CDH3P22223 AC131281.1-201ENST00000522984 164 ntBASIC1.54□□□□□ -2.16
CDH3P22223 AL355297.3-201ENST00000604082 446 ntBASIC1.54□□□□□ -2.16
CDH3P22223 MIR8074-201ENST00000615081 81 ntBASIC1.54□□□□□ -2.16
CDH3P22223 AL161722.3-201ENST00000605789 2983 ntBASIC1.53□□□□□ -2.16
CDH3P22223 SNORD116-13-201ENST00000384408 92 ntBASIC1.53□□□□□ -2.16
CDH3P22223 SNORA12.1-201ENST00000390873 148 ntBASIC1.53□□□□□ -2.16
CDH3P22223 SNORD115-46-201ENST00000390982 71 ntBASIC1.53□□□□□ -2.16
CDH3P22223 RNU6-985P-201ENST00000410182 104 ntBASIC1.53□□□□□ -2.16
CDH3P22223 RN7SKP51-201ENST00000410781 304 ntBASIC1.53□□□□□ -2.16
CDH3P22223 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.53□□□□□ -2.16
CDH3P22223 RPL23AP36-201ENST00000413895 458 ntBASIC1.53□□□□□ -2.16
CDH3P22223 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.53□□□□□ -2.16
CDH3P22223 ELOCP20-201ENST00000422460 345 ntBASIC1.53□□□□□ -2.16
CDH3P22223 AC010154.1-201ENST00000425857 269 ntBASIC1.53□□□□□ -2.16
CDH3P22223 AC091021.1-201ENST00000468051 388 ntBASIC1.53□□□□□ -2.16
CDH3P22223 RPL36AP21-201ENST00000490372 323 ntBASIC1.53□□□□□ -2.16
CDH3P22223 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.53□□□□□ -2.16
CDH3P22223 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.53□□□□□ -2.16
CDH3P22223 AC025465.3-201ENST00000510570 311 ntBASIC1.53□□□□□ -2.16
CDH3P22223 RNU6-1278P-201ENST00000516130 107 ntBASIC1.53□□□□□ -2.16
CDH3P22223 RNU6-764P-201ENST00000516396 105 ntBASIC1.53□□□□□ -2.16
CDH3P22223 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.53□□□□□ -2.16
CDH3P22223 DEFB117-201ENST00000602356 141 ntBASIC1.53□□□□□ -2.16
CDH3P22223 AL929325.1-201ENST00000603096 117 ntBASIC1.53□□□□□ -2.16
CDH3P22223 BX248123.2-201ENST00000606318 124 ntBASIC1.53□□□□□ -2.16
CDH3P22223 MIR376A1-201ENST00000616574 68 ntBASIC1.53□□□□□ -2.16
CDH3P22223 MIR8054-201ENST00000620877 86 ntBASIC1.53□□□□□ -2.16
CDH3P22223 AC095038.3-201ENST00000634439 195 ntBASIC1.53□□□□□ -2.16
CDH3P22223 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.17
CDH3P22223 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CDH3P22223 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
CDH3P22223 Y_RNA.26-201ENST00000362539 101 ntBASIC1.52□□□□□ -2.17
CDH3P22223 Y_RNA.210-201ENST00000364161 110 ntBASIC1.52□□□□□ -2.17
CDH3P22223 Y_RNA.214-201ENST00000364201 112 ntBASIC1.52□□□□□ -2.17
CDH3P22223 RNU6-102P-201ENST00000384485 104 ntBASIC1.52□□□□□ -2.17
CDH3P22223 RNU6-1011P-201ENST00000384668 107 ntBASIC1.52□□□□□ -2.17
CDH3P22223 RNU6-21P-201ENST00000384710 107 ntBASIC1.52□□□□□ -2.17
CDH3P22223 RNU6-376P-201ENST00000384731 106 ntBASIC1.52□□□□□ -2.17
CDH3P22223 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CDH3P22223 AC113618.1-201ENST00000416747 285 ntBASIC1.52□□□□□ -2.17
CDH3P22223 RPS29P23-201ENST00000458635 123 ntBASIC1.52□□□□□ -2.17
CDH3P22223 RNU7-94P-201ENST00000459576 63 ntBASIC1.52□□□□□ -2.17
CDH3P22223 AC099513.1-201ENST00000490423 301 ntBASIC1.52□□□□□ -2.17
CDH3P22223 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.52□□□□□ -2.17
CDH3P22223 SNORA77B-201ENST00000578179 125 ntBASIC1.52□□□□□ -2.17
CDH3P22223 MIR4303-201ENST00000581299 66 ntBASIC1.52□□□□□ -2.17
CDH3P22223 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.52□□□□□ -2.17
CDH3P22223 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CDH3P22223 SNORD113-8-201ENST00000363497 74 ntBASIC1.51□□□□□ -2.17
CDH3P22223 Y_RNA.276-201ENST00000364732 109 ntBASIC1.51□□□□□ -2.17
CDH3P22223 RNU6-806P-201ENST00000365147 105 ntBASIC1.51□□□□□ -2.17
CDH3P22223 RNU6-203P-201ENST00000384038 104 ntBASIC1.51□□□□□ -2.17
CDH3P22223 RNU6-440P-201ENST00000390882 105 ntBASIC1.51□□□□□ -2.17
CDH3P22223 SNORA67.6-201ENST00000391093 99 ntBASIC1.51□□□□□ -2.17
CDH3P22223 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.51□□□□□ -2.17
CDH3P22223 RNA5SP511-201ENST00000410487 115 ntBASIC1.51□□□□□ -2.17
CDH3P22223 RNU6-955P-201ENST00000410497 104 ntBASIC1.51□□□□□ -2.17
CDH3P22223 COX6CP10-201ENST00000416832 224 ntBASIC1.51□□□□□ -2.17
CDH3P22223 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.51□□□□□ -2.17
CDH3P22223 JTBP1-201ENST00000441314 247 ntBASIC1.51□□□□□ -2.17
CDH3P22223 HSPE1P25-201ENST00000455484 251 ntBASIC1.51□□□□□ -2.17
CDH3P22223 AC005908.1-201ENST00000468701 347 ntBASIC1.51□□□□□ -2.17
CDH3P22223 RPL21P9-201ENST00000556149 474 ntBASIC1.51□□□□□ -2.17
CDH3P22223 AC015720.1-201ENST00000565251 277 ntBASIC1.51□□□□□ -2.17
CDH3P22223 MIR4709-201ENST00000577272 72 ntBASIC1.51□□□□□ -2.17
CDH3P22223 MIR3145-201ENST00000580727 82 ntBASIC1.51□□□□□ -2.17
CDH3P22223 SNORD113-5-201ENST00000607261 78 ntBASIC1.51□□□□□ -2.17
CDH3P22223 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
CDH3P22223 RNU6-414P-201ENST00000363705 104 ntBASIC1.5□□□□□ -2.17
CDH3P22223 RNU1-42P-201ENST00000364033 160 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms