Protein–RNA interactions for Protein: P0C7V0

LINC00271, Putative uncharacterized protein encoded by LINC00271, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271P0C7V0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC00271P0C7V0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.89□□□□□ -2.11
LINC00271P0C7V0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LINC00271P0C7V0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
LINC00271P0C7V0 CENPCP1-201ENST00000533085 2578 ntBASIC1.88□□□□□ -2.11
LINC00271P0C7V0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.88□□□□□ -2.11
LINC00271P0C7V0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.88□□□□□ -2.11
LINC00271P0C7V0 RNU1-58P-201ENST00000362413 163 ntBASIC1.88□□□□□ -2.11
LINC00271P0C7V0 Y_RNA.287-201ENST00000364853 94 ntBASIC1.88□□□□□ -2.11
LINC00271P0C7V0 RNU1-52P-201ENST00000384190 164 ntBASIC1.88□□□□□ -2.11
LINC00271P0C7V0 RNU6-662P-201ENST00000384253 104 ntBASIC1.88□□□□□ -2.11
LINC00271P0C7V0 RNU6-417P-201ENST00000384712 107 ntBASIC1.88□□□□□ -2.11
LINC00271P0C7V0 MIR499A-201ENST00000384903 122 ntBASIC1.88□□□□□ -2.11
LINC00271P0C7V0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.88□□□□□ -2.11
LINC00271P0C7V0 BX510359.4-201ENST00000423750 193 ntBASIC1.88□□□□□ -2.11
LINC00271P0C7V0 AL135790.2-201ENST00000437701 267 ntBASIC1.88□□□□□ -2.11
LINC00271P0C7V0 AC010409.1-201ENST00000487382 476 ntBASIC1.88□□□□□ -2.11
LINC00271P0C7V0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC00271P0C7V0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC00271P0C7V0 AL137100.2-201ENST00000555786 315 ntBASIC1.88□□□□□ -2.11
LINC00271P0C7V0 MIR4438-201ENST00000585271 93 ntBASIC1.88□□□□□ -2.11
LINC00271P0C7V0 BX284668.6-201ENST00000606899 438 ntBASIC1.88□□□□□ -2.11
LINC00271P0C7V0 MIR338-201ENST00000636369 67 ntBASIC1.88□□□□□ -2.11
LINC00271P0C7V0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LINC00271P0C7V0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LINC00271P0C7V0 RNU6-740P-201ENST00000364734 105 ntBASIC1.87□□□□□ -2.11
LINC00271P0C7V0 Y_RNA.355-201ENST00000365462 98 ntBASIC1.87□□□□□ -2.11
LINC00271P0C7V0 Y_RNA.508-201ENST00000384502 114 ntBASIC1.87□□□□□ -2.11
LINC00271P0C7V0 Y_RNA.539-201ENST00000384635 107 ntBASIC1.87□□□□□ -2.11
LINC00271P0C7V0 SNORA40.19-201ENST00000390846 128 ntBASIC1.87□□□□□ -2.11
LINC00271P0C7V0 HMGN2P39-201ENST00000398005 273 ntBASIC1.87□□□□□ -2.11
LINC00271P0C7V0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.87□□□□□ -2.11
LINC00271P0C7V0 AC011753.1-201ENST00000451001 220 ntBASIC1.87□□□□□ -2.11
LINC00271P0C7V0 HSPE1P13-201ENST00000451143 297 ntBASIC1.87□□□□□ -2.11
LINC00271P0C7V0 AC079804.2-201ENST00000490376 200 ntBASIC1.87□□□□□ -2.11
LINC00271P0C7V0 RNU6-1337P-201ENST00000516525 95 ntBASIC1.87□□□□□ -2.11
LINC00271P0C7V0 AL162424.1-201ENST00000602325 221 ntBASIC1.87□□□□□ -2.11
LINC00271P0C7V0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
LINC00271P0C7V0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LINC00271P0C7V0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
LINC00271P0C7V0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
LINC00271P0C7V0 Y_RNA.117-201ENST00000363294 101 ntBASIC1.86□□□□□ -2.11
LINC00271P0C7V0 SNORA3A-201ENST00000364113 130 ntBASIC1.86□□□□□ -2.11
LINC00271P0C7V0 Y_RNA.217-201ENST00000364214 105 ntBASIC1.86□□□□□ -2.11
LINC00271P0C7V0 Y_RNA.341-201ENST00000365341 102 ntBASIC1.86□□□□□ -2.11
LINC00271P0C7V0 RNA5SP37-201ENST00000365420 130 ntBASIC1.86□□□□□ -2.11
LINC00271P0C7V0 Y_RNA.368-201ENST00000365547 113 ntBASIC1.86□□□□□ -2.11
LINC00271P0C7V0 RNU6-1289P-201ENST00000384431 106 ntBASIC1.86□□□□□ -2.11
LINC00271P0C7V0 AL117342.1-201ENST00000404861 406 ntBASIC1.86□□□□□ -2.11
LINC00271P0C7V0 AL139109.1-201ENST00000455491 297 ntBASIC1.86□□□□□ -2.11
LINC00271P0C7V0 Y_RNA.641-201ENST00000459414 105 ntBASIC1.86□□□□□ -2.11
LINC00271P0C7V0 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.86□□□□□ -2.11
LINC00271P0C7V0 RNU6-388P-201ENST00000517012 105 ntBASIC1.86□□□□□ -2.11
LINC00271P0C7V0 RNU6-389P-201ENST00000517048 105 ntBASIC1.86□□□□□ -2.11
LINC00271P0C7V0 RNU6-111P-201ENST00000517179 105 ntBASIC1.86□□□□□ -2.11
LINC00271P0C7V0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.86□□□□□ -2.11
LINC00271P0C7V0 AC009127.3-201ENST00000570531 403 ntBASIC1.86□□□□□ -2.11
LINC00271P0C7V0 MIR4643-201ENST00000577473 78 ntBASIC1.86□□□□□ -2.11
LINC00271P0C7V0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.86□□□□□ -2.11
LINC00271P0C7V0 AC005357.1-201ENST00000588399 301 ntBASIC1.86□□□□□ -2.11
LINC00271P0C7V0 AC002984.1-201ENST00000591692 448 ntBASIC1.86□□□□□ -2.11
LINC00271P0C7V0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.86□□□□□ -2.11
LINC00271P0C7V0 U6.73-201ENST00000619194 103 ntBASIC1.86□□□□□ -2.11
LINC00271P0C7V0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
LINC00271P0C7V0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
LINC00271P0C7V0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.85□□□□□ -2.11
LINC00271P0C7V0 RNU1-22P-201ENST00000363334 158 ntBASIC1.85□□□□□ -2.11
LINC00271P0C7V0 Y_RNA.172-201ENST00000363765 102 ntBASIC1.85□□□□□ -2.11
LINC00271P0C7V0 Y_RNA.796-201ENST00000364268 102 ntBASIC1.85□□□□□ -2.11
LINC00271P0C7V0 Y_RNA.799-201ENST00000364992 102 ntBASIC1.85□□□□□ -2.11
LINC00271P0C7V0 Y_RNA.310-201ENST00000365063 113 ntBASIC1.85□□□□□ -2.11
LINC00271P0C7V0 Y_RNA.456-201ENST00000384232 111 ntBASIC1.85□□□□□ -2.11
LINC00271P0C7V0 MIR518A2-201ENST00000384966 87 ntBASIC1.85□□□□□ -2.11
LINC00271P0C7V0 MIR597-201ENST00000384968 97 ntBASIC1.85□□□□□ -2.11
LINC00271P0C7V0 MIR1283-2-201ENST00000408621 87 ntBASIC1.85□□□□□ -2.11
LINC00271P0C7V0 HMGN2P35-201ENST00000412164 270 ntBASIC1.85□□□□□ -2.11
LINC00271P0C7V0 AC010154.1-201ENST00000425857 269 ntBASIC1.85□□□□□ -2.11
LINC00271P0C7V0 RNU6-717P-201ENST00000459076 104 ntBASIC1.85□□□□□ -2.11
LINC00271P0C7V0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.85□□□□□ -2.11
LINC00271P0C7V0 AC097462.1-201ENST00000514125 324 ntBASIC1.85□□□□□ -2.11
LINC00271P0C7V0 AC136628.3-201ENST00000521868 290 ntBASIC1.85□□□□□ -2.11
LINC00271P0C7V0 AP005660.1-201ENST00000522972 293 ntBASIC1.85□□□□□ -2.11
LINC00271P0C7V0 AC090425.1-201ENST00000610007 140 ntBASIC1.85□□□□□ -2.11
LINC00271P0C7V0 AC078938.1-201ENST00000620993 318 ntBASIC1.85□□□□□ -2.11
LINC00271P0C7V0 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.85□□□□□ -2.11
LINC00271P0C7V0 AC022513.1-201ENST00000624512 117 ntBASIC1.85□□□□□ -2.11
LINC00271P0C7V0 MIR337-201ENST00000362281 93 ntBASIC1.84□□□□□ -2.11
LINC00271P0C7V0 RNU6-1272P-201ENST00000362776 107 ntBASIC1.84□□□□□ -2.11
LINC00271P0C7V0 RNU6-862P-201ENST00000362804 105 ntBASIC1.84□□□□□ -2.11
LINC00271P0C7V0 Y_RNA.65-201ENST00000362846 100 ntBASIC1.84□□□□□ -2.11
LINC00271P0C7V0 Y_RNA.82-201ENST00000363000 102 ntBASIC1.84□□□□□ -2.11
LINC00271P0C7V0 Y_RNA.92-201ENST00000363043 102 ntBASIC1.84□□□□□ -2.11
LINC00271P0C7V0 RNU6-801P-201ENST00000364087 105 ntBASIC1.84□□□□□ -2.11
LINC00271P0C7V0 Y_RNA.235-201ENST00000364412 102 ntBASIC1.84□□□□□ -2.11
LINC00271P0C7V0 Y_RNA.306-201ENST00000365015 102 ntBASIC1.84□□□□□ -2.11
LINC00271P0C7V0 Y_RNA.312-201ENST00000365089 102 ntBASIC1.84□□□□□ -2.11
LINC00271P0C7V0 Y_RNA.322-201ENST00000365151 102 ntBASIC1.84□□□□□ -2.11
LINC00271P0C7V0 RNU6-117P-201ENST00000365415 107 ntBASIC1.84□□□□□ -2.11
LINC00271P0C7V0 RNU6-338P-201ENST00000383888 105 ntBASIC1.84□□□□□ -2.11
LINC00271P0C7V0 SNORD116-13-201ENST00000384408 92 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms