Protein–RNA interactions for Protein: P09619

PDGFRB, Platelet-derived growth factor receptor beta, humanhuman

Predictions only

Length 1,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRBP09619 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PDGFRBP09619 Y_RNA.64-201ENST00000362845 102 ntBASIC2.22□□□□□ -2.05
PDGFRBP09619 Y_RNA.136-201ENST00000363444 102 ntBASIC2.22□□□□□ -2.05
PDGFRBP09619 RNU6-102P-201ENST00000384485 104 ntBASIC2.22□□□□□ -2.05
PDGFRBP09619 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
PDGFRBP09619 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.22□□□□□ -2.05
PDGFRBP09619 HSPE1P21-201ENST00000438283 308 ntBASIC2.22□□□□□ -2.05
PDGFRBP09619 snoU13.9-201ENST00000458927 103 ntBASIC2.22□□□□□ -2.05
PDGFRBP09619 SNORA31.10-201ENST00000516482 106 ntBASIC2.22□□□□□ -2.05
PDGFRBP09619 MIR5002-201ENST00000584713 97 ntBASIC2.22□□□□□ -2.05
PDGFRBP09619 Y_RNA.783-201ENST00000613546 102 ntBASIC2.22□□□□□ -2.05
PDGFRBP09619 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
PDGFRBP09619 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PDGFRBP09619 RNU4-80P-201ENST00000363200 141 ntBASIC2.21□□□□□ -2.06
PDGFRBP09619 RNA5SP37-201ENST00000365420 130 ntBASIC2.21□□□□□ -2.06
PDGFRBP09619 Y_RNA.459-201ENST00000384251 102 ntBASIC2.21□□□□□ -2.06
PDGFRBP09619 RNA5SP482-201ENST00000391269 118 ntBASIC2.21□□□□□ -2.06
PDGFRBP09619 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.21□□□□□ -2.06
PDGFRBP09619 Y_RNA.621-201ENST00000411065 96 ntBASIC2.21□□□□□ -2.06
PDGFRBP09619 RPL21P38-201ENST00000418090 167 ntBASIC2.21□□□□□ -2.06
PDGFRBP09619 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.21□□□□□ -2.06
PDGFRBP09619 DYNLT3P2-201ENST00000442517 295 ntBASIC2.21□□□□□ -2.06
PDGFRBP09619 HMGN2P23-201ENST00000456759 269 ntBASIC2.21□□□□□ -2.06
PDGFRBP09619 AL049830.1-201ENST00000468034 425 ntBASIC2.21□□□□□ -2.06
PDGFRBP09619 AC008834.1-201ENST00000511612 175 ntBASIC2.21□□□□□ -2.06
PDGFRBP09619 RNU2-31P-201ENST00000516954 155 ntBASIC2.21□□□□□ -2.06
PDGFRBP09619 IGKV3-31-201ENST00000523109 329 ntBASIC2.21□□□□□ -2.06
PDGFRBP09619 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.21□□□□□ -2.06
PDGFRBP09619 AC092881.1-201ENST00000638218 2733 ntBASIC2.21□□□□□ -2.06
PDGFRBP09619 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
PDGFRBP09619 SNORA25.1-201ENST00000362326 128 ntBASIC2.2□□□□□ -2.06
PDGFRBP09619 Y_RNA.162-201ENST00000363683 102 ntBASIC2.2□□□□□ -2.06
PDGFRBP09619 Y_RNA.176-201ENST00000363815 109 ntBASIC2.2□□□□□ -2.06
PDGFRBP09619 Y_RNA.310-201ENST00000365063 113 ntBASIC2.2□□□□□ -2.06
PDGFRBP09619 RNU6-806P-201ENST00000365147 105 ntBASIC2.2□□□□□ -2.06
PDGFRBP09619 RNU6-326P-201ENST00000365480 107 ntBASIC2.2□□□□□ -2.06
PDGFRBP09619 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.2□□□□□ -2.06
PDGFRBP09619 AL445646.1-201ENST00000431784 216 ntBASIC2.2□□□□□ -2.06
PDGFRBP09619 STAG3L5P-204ENST00000443759 179 ntBASIC2.2□□□□□ -2.06
PDGFRBP09619 RPS4XP11-201ENST00000446897 772 ntBASIC2.2□□□□□ -2.06
PDGFRBP09619 AC098869.1-201ENST00000481627 292 ntBASIC2.2□□□□□ -2.06
PDGFRBP09619 AL512605.2-201ENST00000592972 256 ntBASIC2.2□□□□□ -2.06
PDGFRBP09619 AL360085.1-201ENST00000604713 532 ntBASIC2.2□□□□□ -2.06
PDGFRBP09619 AC068647.2-201ENST00000637380 353 ntBASIC2.2□□□□□ -2.06
PDGFRBP09619 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PDGFRBP09619 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PDGFRBP09619 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PDGFRBP09619 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PDGFRBP09619 SNORA1B-201ENST00000362535 133 ntBASIC2.19□□□□□ -2.06
PDGFRBP09619 AL139156.1-201ENST00000412785 841 ntBASIC2.19□□□□□ -2.06
PDGFRBP09619 UBL5P3-201ENST00000475112 231 ntBASIC2.19□□□□□ -2.06
PDGFRBP09619 RNU6-327P-201ENST00000516270 127 ntBASIC2.19□□□□□ -2.06
PDGFRBP09619 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.19□□□□□ -2.06
PDGFRBP09619 AC011604.1-201ENST00000545978 196 ntBASIC2.19□□□□□ -2.06
PDGFRBP09619 RNU6-1123P-201ENST00000362347 106 ntBASIC2.18□□□□□ -2.06
PDGFRBP09619 snoU2_19.2-201ENST00000363024 80 ntBASIC2.18□□□□□ -2.06
PDGFRBP09619 RNU6-1323P-201ENST00000384025 107 ntBASIC2.18□□□□□ -2.06
PDGFRBP09619 SNORA72-201ENST00000384339 132 ntBASIC2.18□□□□□ -2.06
PDGFRBP09619 RNU6-1105P-201ENST00000384774 107 ntBASIC2.18□□□□□ -2.06
PDGFRBP09619 RNU2-2P-201ENST00000410396 191 ntBASIC2.18□□□□□ -2.06
PDGFRBP09619 RNA5SP338-201ENST00000410495 85 ntBASIC2.18□□□□□ -2.06
PDGFRBP09619 RPL30P13-201ENST00000418873 348 ntBASIC2.18□□□□□ -2.06
PDGFRBP09619 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
PDGFRBP09619 PGBD4P5-201ENST00000445958 426 ntBASIC2.18□□□□□ -2.06
PDGFRBP09619 snoU13.15-201ENST00000459407 104 ntBASIC2.18□□□□□ -2.06
PDGFRBP09619 AC136628.3-201ENST00000521868 290 ntBASIC2.18□□□□□ -2.06
PDGFRBP09619 AC136443.5-201ENST00000603741 370 ntBASIC2.18□□□□□ -2.06
PDGFRBP09619 AC021506.2-201ENST00000612354 169 ntBASIC2.18□□□□□ -2.06
PDGFRBP09619 AC073349.3-201ENST00000617616 186 ntBASIC2.18□□□□□ -2.06
PDGFRBP09619 uc_338.20-201ENST00000621563 178 ntBASIC2.18□□□□□ -2.06
PDGFRBP09619 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
PDGFRBP09619 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
PDGFRBP09619 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PDGFRBP09619 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.17□□□□□ -2.06
PDGFRBP09619 MIR424-201ENST00000362227 98 ntBASIC2.17□□□□□ -2.06
PDGFRBP09619 SNORD114-1-201ENST00000362705 72 ntBASIC2.17□□□□□ -2.06
PDGFRBP09619 Y_RNA.172-201ENST00000363765 102 ntBASIC2.17□□□□□ -2.06
PDGFRBP09619 Y_RNA.418-201ENST00000384029 102 ntBASIC2.17□□□□□ -2.06
PDGFRBP09619 RNU2-40P-201ENST00000410833 196 ntBASIC2.17□□□□□ -2.06
PDGFRBP09619 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.17□□□□□ -2.06
PDGFRBP09619 snoU13.26-201ENST00000459452 105 ntBASIC2.17□□□□□ -2.06
PDGFRBP09619 MTATP8P1-201ENST00000467115 207 ntBASIC2.17□□□□□ -2.06
PDGFRBP09619 RNU6-191P-201ENST00000516295 94 ntBASIC2.17□□□□□ -2.06
PDGFRBP09619 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.17□□□□□ -2.06
PDGFRBP09619 SNRPGP19-201ENST00000603826 189 ntBASIC2.17□□□□□ -2.06
PDGFRBP09619 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.17□□□□□ -2.06
PDGFRBP09619 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PDGFRBP09619 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
PDGFRBP09619 Y_RNA.26-201ENST00000362539 101 ntBASIC2.16□□□□□ -2.06
PDGFRBP09619 Y_RNA.84-201ENST00000363011 104 ntBASIC2.16□□□□□ -2.06
PDGFRBP09619 RNU6-238P-201ENST00000363313 106 ntBASIC2.16□□□□□ -2.06
PDGFRBP09619 Y_RNA.541-201ENST00000384640 113 ntBASIC2.16□□□□□ -2.06
PDGFRBP09619 MIR215-201ENST00000384858 110 ntBASIC2.16□□□□□ -2.06
PDGFRBP09619 MIR934-201ENST00000401241 83 ntBASIC2.16□□□□□ -2.06
PDGFRBP09619 AC004965.1-201ENST00000413033 213 ntBASIC2.16□□□□□ -2.06
PDGFRBP09619 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.16□□□□□ -2.06
PDGFRBP09619 RNU6-1045P-201ENST00000516321 107 ntBASIC2.16□□□□□ -2.06
PDGFRBP09619 SCARNA15.1-201ENST00000516384 125 ntBASIC2.16□□□□□ -2.06
PDGFRBP09619 AL117187.1-201ENST00000555482 181 ntBASIC2.16□□□□□ -2.06
PDGFRBP09619 AC008269.2-201ENST00000561915 1105 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms