Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RNU6-977P-201ENST00000516411 103 ntBASIC-0.01□□□□□ -2.41
HLA-DQB2P05538 AC093023.1-201ENST00000547375 507 ntBASIC-0.01□□□□□ -2.41
HLA-DQB2P05538 AL603755.1-201ENST00000619504 163 ntBASIC-0.01□□□□□ -2.41
HLA-DQB2P05538 MIR4315-1-201ENST00000636800 73 ntBASIC-0.01□□□□□ -2.41
HLA-DQB2P05538 MIR4315-2-201ENST00000640925 73 ntBASIC-0.01□□□□□ -2.41
HLA-DQB2P05538 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.02□□□□□ -2.41
HLA-DQB2P05538 SNORD114-7-201ENST00000362520 77 ntBASIC-0.02□□□□□ -2.41
HLA-DQB2P05538 SNORA69-201ENST00000383895 132 ntBASIC-0.02□□□□□ -2.41
HLA-DQB2P05538 RNU6-815P-201ENST00000384080 113 ntBASIC-0.02□□□□□ -2.41
HLA-DQB2P05538 MIR517A-201ENST00000385001 87 ntBASIC-0.02□□□□□ -2.41
HLA-DQB2P05538 RNU6-648P-201ENST00000410190 107 ntBASIC-0.02□□□□□ -2.41
HLA-DQB2P05538 SNORA40.8-201ENST00000411034 126 ntBASIC-0.02□□□□□ -2.41
HLA-DQB2P05538 MLLT10P1-201ENST00000418346 262 ntBASIC-0.02□□□□□ -2.41
HLA-DQB2P05538 MTND3P23-201ENST00000431980 347 ntBASIC-0.02□□□□□ -2.41
HLA-DQB2P05538 AL353997.1-201ENST00000432936 108 ntBASIC-0.02□□□□□ -2.41
HLA-DQB2P05538 ELOCP24-201ENST00000456370 334 ntBASIC-0.02□□□□□ -2.41
HLA-DQB2P05538 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.02□□□□□ -2.41
HLA-DQB2P05538 RNU7-175P-201ENST00000515915 61 ntBASIC-0.02□□□□□ -2.41
HLA-DQB2P05538 EIF1P4-201ENST00000572664 335 ntBASIC-0.02□□□□□ -2.41
HLA-DQB2P05538 AL355375.2-201ENST00000574825 175 ntBASIC-0.02□□□□□ -2.41
HLA-DQB2P05538 MIR548AO-201ENST00000579992 96 ntBASIC-0.02□□□□□ -2.41
HLA-DQB2P05538 MIR330-201ENST00000362196 94 ntBASIC-0.03□□□□□ -2.41
HLA-DQB2P05538 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.03□□□□□ -2.41
HLA-DQB2P05538 RNU6-580P-201ENST00000365159 107 ntBASIC-0.03□□□□□ -2.41
HLA-DQB2P05538 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.03□□□□□ -2.41
HLA-DQB2P05538 MIR329-1-201ENST00000385028 80 ntBASIC-0.03□□□□□ -2.41
HLA-DQB2P05538 MIR522-201ENST00000385071 87 ntBASIC-0.03□□□□□ -2.41
HLA-DQB2P05538 RN7SKP142-201ENST00000411236 328 ntBASIC-0.03□□□□□ -2.41
HLA-DQB2P05538 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.03□□□□□ -2.41
HLA-DQB2P05538 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.03□□□□□ -2.41
HLA-DQB2P05538 AL358176.2-201ENST00000425769 204 ntBASIC-0.03□□□□□ -2.41
HLA-DQB2P05538 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.03□□□□□ -2.41
HLA-DQB2P05538 SUMO1P2-201ENST00000452524 304 ntBASIC-0.03□□□□□ -2.41
HLA-DQB2P05538 RNU6-863P-201ENST00000515989 104 ntBASIC-0.03□□□□□ -2.41
HLA-DQB2P05538 SNORA62.5-201ENST00000516634 120 ntBASIC-0.03□□□□□ -2.41
HLA-DQB2P05538 RNU6-835P-201ENST00000516974 104 ntBASIC-0.03□□□□□ -2.41
HLA-DQB2P05538 AC069113.3-201ENST00000521019 150 ntBASIC-0.03□□□□□ -2.41
HLA-DQB2P05538 AC125232.2-201ENST00000592457 143 ntBASIC-0.03□□□□□ -2.41
HLA-DQB2P05538 SNORA25.18-201ENST00000607153 114 ntBASIC-0.03□□□□□ -2.41
HLA-DQB2P05538 AL357075.2-201ENST00000614906 189 ntBASIC-0.03□□□□□ -2.41
HLA-DQB2P05538 AC097520.1-201ENST00000624435 385 ntBASIC-0.03□□□□□ -2.41
HLA-DQB2P05538 MIR377-201ENST00000362145 69 ntBASIC-0.04□□□□□ -2.42
HLA-DQB2P05538 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.04□□□□□ -2.42
HLA-DQB2P05538 SNORA42.1-201ENST00000363515 137 ntBASIC-0.04□□□□□ -2.42
HLA-DQB2P05538 RNU6-454P-201ENST00000364292 107 ntBASIC-0.04□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.04□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.04□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.04□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.04□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.04□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.04□□□□□ -2.42
HLA-DQB2P05538 MIR613-201ENST00000385248 95 ntBASIC-0.04□□□□□ -2.42
HLA-DQB2P05538 MTND1P26-201ENST00000440488 538 ntBASIC-0.04□□□□□ -2.42
HLA-DQB2P05538 SNORD45.4-201ENST00000516629 73 ntBASIC-0.04□□□□□ -2.42
HLA-DQB2P05538 AP003327.1-201ENST00000529684 127 ntBASIC-0.04□□□□□ -2.42
HLA-DQB2P05538 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.04□□□□□ -2.42
HLA-DQB2P05538 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.04□□□□□ -2.42
HLA-DQB2P05538 AC073648.5-201ENST00000603502 305 ntBASIC-0.04□□□□□ -2.42
HLA-DQB2P05538 RAC1P9-201ENST00000604990 392 ntBASIC-0.04□□□□□ -2.42
HLA-DQB2P05538 RNU6-89P-201ENST00000606519 100 ntBASIC-0.04□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.05□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.296-201ENST00000364930 108 ntBASIC-0.05□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.05□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.05□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.05□□□□□ -2.42
HLA-DQB2P05538 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
HLA-DQB2P05538 SNORD28B-201ENST00000390993 75 ntBASIC-0.05□□□□□ -2.42
HLA-DQB2P05538 USP9YP16-201ENST00000430287 407 ntBASIC-0.05□□□□□ -2.42
HLA-DQB2P05538 MTATP6P13-201ENST00000438531 667 ntBASIC-0.05□□□□□ -2.42
HLA-DQB2P05538 USP9YP23-201ENST00000455085 407 ntBASIC-0.05□□□□□ -2.42
HLA-DQB2P05538 AC093534.1-201ENST00000504977 132 ntBASIC-0.05□□□□□ -2.42
HLA-DQB2P05538 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.05□□□□□ -2.42
HLA-DQB2P05538 AC090617.3-201ENST00000573670 475 ntBASIC-0.05□□□□□ -2.42
HLA-DQB2P05538 MIR4771-2-201ENST00000577758 74 ntBASIC-0.05□□□□□ -2.42
HLA-DQB2P05538 MIR4771-1-201ENST00000582617 74 ntBASIC-0.05□□□□□ -2.42
HLA-DQB2P05538 AC092954.2-201ENST00000609103 430 ntBASIC-0.05□□□□□ -2.42
HLA-DQB2P05538 MIR7111-201ENST00000619751 72 ntBASIC-0.05□□□□□ -2.42
HLA-DQB2P05538 SNORD114-16-201ENST00000363044 70 ntBASIC-0.06□□□□□ -2.42
HLA-DQB2P05538 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.06□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.06□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.06□□□□□ -2.42
HLA-DQB2P05538 RNU6-934P-201ENST00000365154 107 ntBASIC-0.06□□□□□ -2.42
HLA-DQB2P05538 RNU6-396P-201ENST00000365369 105 ntBASIC-0.06□□□□□ -2.42
HLA-DQB2P05538 SNORA75-201ENST00000384158 137 ntBASIC-0.06□□□□□ -2.42
HLA-DQB2P05538 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.06□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.06□□□□□ -2.42
HLA-DQB2P05538 MIR570-201ENST00000384917 97 ntBASIC-0.06□□□□□ -2.42
HLA-DQB2P05538 RNU4-55P-201ENST00000410731 137 ntBASIC-0.06□□□□□ -2.42
HLA-DQB2P05538 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.06□□□□□ -2.42
HLA-DQB2P05538 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.06□□□□□ -2.42
HLA-DQB2P05538 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.06□□□□□ -2.42
HLA-DQB2P05538 RN7SKP287-201ENST00000516546 266 ntBASIC-0.06□□□□□ -2.42
HLA-DQB2P05538 MIR1273G-201ENST00000577677 100 ntBASIC-0.06□□□□□ -2.42
HLA-DQB2P05538 MIR4804-201ENST00000581683 73 ntBASIC-0.06□□□□□ -2.42
HLA-DQB2P05538 MIR548AR-201ENST00000582191 57 ntBASIC-0.06□□□□□ -2.42
HLA-DQB2P05538 AC005730.3-201ENST00000583067 366 ntBASIC-0.06□□□□□ -2.42
HLA-DQB2P05538 AC019193.3-201ENST00000609144 554 ntBASIC-0.06□□□□□ -2.42
HLA-DQB2P05538 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.06□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.07□□□□□ -2.42
HLA-DQB2P05538 SNORD118-201ENST00000363593 134 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms