Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 RNU6-606P-201ENST00000384721 111 ntBASIC-0.75□□□□□ -2.53
TCRAP04437 SNORA26-201ENST00000391286 122 ntBASIC-0.75□□□□□ -2.53
TCRAP04437 RNU2-72P-201ENST00000411175 163 ntBASIC-0.75□□□□□ -2.53
TCRAP04437 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.75□□□□□ -2.53
TCRAP04437 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.75□□□□□ -2.53
TCRAP04437 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.75□□□□□ -2.53
TCRAP04437 MTND4P32-201ENST00000437189 1237 ntBASIC-0.75□□□□□ -2.53
TCRAP04437 USP9YP25-201ENST00000457708 443 ntBASIC-0.75□□□□□ -2.53
TCRAP04437 RNU7-62P-201ENST00000458856 62 ntBASIC-0.75□□□□□ -2.53
TCRAP04437 RNU6-180P-201ENST00000516697 61 ntBASIC-0.75□□□□□ -2.53
TCRAP04437 RNU7-156P-201ENST00000517214 74 ntBASIC-0.75□□□□□ -2.53
TCRAP04437 AL137161.1-201ENST00000532231 390 ntBASIC-0.75□□□□□ -2.53
TCRAP04437 AP000811.1-201ENST00000603803 651 ntBASIC-0.75□□□□□ -2.53
TCRAP04437 AL670379.3-201ENST00000605040 251 ntBASIC-0.75□□□□□ -2.53
TCRAP04437 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.75□□□□□ -2.53
TCRAP04437 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.76□□□□□ -2.53
TCRAP04437 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.76□□□□□ -2.53
TCRAP04437 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.76□□□□□ -2.53
TCRAP04437 MIR1-2-201ENST00000384961 85 ntBASIC-0.76□□□□□ -2.53
TCRAP04437 MIR522-201ENST00000385071 87 ntBASIC-0.76□□□□□ -2.53
TCRAP04437 RNU2-29P-201ENST00000410423 189 ntBASIC-0.76□□□□□ -2.53
TCRAP04437 POLR2KP2-201ENST00000438155 177 ntBASIC-0.76□□□□□ -2.53
TCRAP04437 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.76□□□□□ -2.53
TCRAP04437 MIR3152-201ENST00000579801 74 ntBASIC-0.76□□□□□ -2.53
TCRAP04437 AC018714.1-201ENST00000605028 208 ntBASIC-0.76□□□□□ -2.53
TCRAP04437 AC011921.3-201ENST00000605540 361 ntBASIC-0.76□□□□□ -2.53
TCRAP04437 AL158211.2-201ENST00000607282 395 ntBASIC-0.76□□□□□ -2.53
TCRAP04437 AL158209.2-201ENST00000619266 216 ntBASIC-0.76□□□□□ -2.53
TCRAP04437 RNU4-73P-201ENST00000363164 141 ntBASIC-0.77□□□□□ -2.53
TCRAP04437 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.77□□□□□ -2.53
TCRAP04437 RNU6-636P-201ENST00000384598 107 ntBASIC-0.77□□□□□ -2.53
TCRAP04437 MIR604-201ENST00000384880 94 ntBASIC-0.77□□□□□ -2.53
TCRAP04437 MIR196A2-201ENST00000385189 110 ntBASIC-0.77□□□□□ -2.53
TCRAP04437 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.77□□□□□ -2.53
TCRAP04437 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.77□□□□□ -2.53
TCRAP04437 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.77□□□□□ -2.53
TCRAP04437 AC007751.1-201ENST00000529260 376 ntBASIC-0.77□□□□□ -2.53
TCRAP04437 AC096720.1-201ENST00000604441 183 ntBASIC-0.77□□□□□ -2.53
TCRAP04437 AC006566.1-201ENST00000608943 513 ntBASIC-0.77□□□□□ -2.53
TCRAP04437 AC027807.2-201ENST00000616099 408 ntBASIC-0.77□□□□□ -2.53
TCRAP04437 AC006927.3-201ENST00000638789 384 ntBASIC-0.77□□□□□ -2.53
TCRAP04437 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.78□□□□□ -2.53
TCRAP04437 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.78□□□□□ -2.53
TCRAP04437 MIR153-2-201ENST00000385225 87 ntBASIC-0.78□□□□□ -2.53
TCRAP04437 ELOCP21-201ENST00000412558 336 ntBASIC-0.78□□□□□ -2.53
TCRAP04437 AL512286.1-201ENST00000439244 400 ntBASIC-0.78□□□□□ -2.53
TCRAP04437 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.78□□□□□ -2.53
TCRAP04437 RPS29P8-201ENST00000445109 171 ntBASIC-0.78□□□□□ -2.53
TCRAP04437 CPDP1-201ENST00000579660 283 ntBASIC-0.78□□□□□ -2.53
TCRAP04437 RN7SL660P-201ENST00000614852 299 ntBASIC-0.78□□□□□ -2.53
TCRAP04437 MTND1P7-201ENST00000632801 297 ntBASIC-0.78□□□□□ -2.53
TCRAP04437 AC091304.10-201ENST00000641554 121 ntBASIC-0.78□□□□□ -2.53
TCRAP04437 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.79□□□□□ -2.54
TCRAP04437 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.79□□□□□ -2.54
TCRAP04437 RNU6-159P-201ENST00000391080 106 ntBASIC-0.79□□□□□ -2.54
TCRAP04437 MIR873-201ENST00000401120 77 ntBASIC-0.79□□□□□ -2.54
TCRAP04437 MIR1257-201ENST00000408490 117 ntBASIC-0.79□□□□□ -2.54
TCRAP04437 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.79□□□□□ -2.54
TCRAP04437 AL358934.1-201ENST00000432346 324 ntBASIC-0.79□□□□□ -2.54
TCRAP04437 MTCO1P5-201ENST00000433573 344 ntBASIC-0.79□□□□□ -2.54
TCRAP04437 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.79□□□□□ -2.54
TCRAP04437 RNU7-185P-201ENST00000459215 60 ntBASIC-0.79□□□□□ -2.54
TCRAP04437 AC010486.3-201ENST00000511602 785 ntBASIC-0.79□□□□□ -2.54
TCRAP04437 RNU6-107P-201ENST00000516643 102 ntBASIC-0.79□□□□□ -2.54
TCRAP04437 PIGPP4-201ENST00000584447 307 ntBASIC-0.79□□□□□ -2.54
TCRAP04437 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.8□□□□□ -2.54
TCRAP04437 RNU6-83P-201ENST00000384568 112 ntBASIC-0.8□□□□□ -2.54
TCRAP04437 RNU6-136P-201ENST00000384663 107 ntBASIC-0.8□□□□□ -2.54
TCRAP04437 MIR570-201ENST00000384917 97 ntBASIC-0.8□□□□□ -2.54
TCRAP04437 SNORD75.1-201ENST00000408373 60 ntBASIC-0.8□□□□□ -2.54
TCRAP04437 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.8□□□□□ -2.54
TCRAP04437 SSR1P2-201ENST00000415208 787 ntBASIC-0.8□□□□□ -2.54
TCRAP04437 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.8□□□□□ -2.54
TCRAP04437 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.8□□□□□ -2.54
TCRAP04437 AC018448.1-201ENST00000552843 316 ntBASIC-0.8□□□□□ -2.54
TCRAP04437 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.8□□□□□ -2.54
TCRAP04437 AL136370.1-201ENST00000608166 691 ntBASIC-0.8□□□□□ -2.54
TCRAP04437 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.8□□□□□ -2.54
TCRAP04437 uc_338.22-201ENST00000622722 187 ntBASIC-0.8□□□□□ -2.54
TCRAP04437 MIR521-1-201ENST00000384902 87 ntBASIC-0.81□□□□□ -2.54
TCRAP04437 RNU6-1000P-201ENST00000391066 106 ntBASIC-0.81□□□□□ -2.54
TCRAP04437 AL354751.2-201ENST00000415471 210 ntBASIC-0.81□□□□□ -2.54
TCRAP04437 SUMO1P3-201ENST00000439961 304 ntBASIC-0.81□□□□□ -2.54
TCRAP04437 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.81□□□□□ -2.54
TCRAP04437 RNU6-504P-201ENST00000516568 104 ntBASIC-0.81□□□□□ -2.54
TCRAP04437 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.81□□□□□ -2.54
TCRAP04437 RNU6-135P-201ENST00000516769 101 ntBASIC-0.81□□□□□ -2.54
TCRAP04437 RNU2-60P-201ENST00000517290 128 ntBASIC-0.81□□□□□ -2.54
TCRAP04437 MIR4999-201ENST00000585029 91 ntBASIC-0.81□□□□□ -2.54
TCRAP04437 SNORD114-7-201ENST00000362520 77 ntBASIC-0.82□□□□□ -2.54
TCRAP04437 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.82□□□□□ -2.54
TCRAP04437 SNORD50B-201ENST00000364995 70 ntBASIC-0.82□□□□□ -2.54
TCRAP04437 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.82□□□□□ -2.54
TCRAP04437 MIR224-201ENST00000384889 81 ntBASIC-0.82□□□□□ -2.54
TCRAP04437 RNU6-329P-201ENST00000459618 107 ntBASIC-0.82□□□□□ -2.54
TCRAP04437 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.82□□□□□ -2.54
TCRAP04437 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.82□□□□□ -2.54
TCRAP04437 RNU6-830P-201ENST00000516353 107 ntBASIC-0.82□□□□□ -2.54
TCRAP04437 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.82□□□□□ -2.54
TCRAP04437 AC104576.1-201ENST00000524225 88 ntBASIC-0.82□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms