Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 Y_RNA.461-201ENST00000384263 103 ntBASIC1.69□□□□□ -2.14
RAF1P04049 RNU6-463P-201ENST00000384340 107 ntBASIC1.69□□□□□ -2.14
RAF1P04049 RNU6-417P-201ENST00000384712 107 ntBASIC1.69□□□□□ -2.14
RAF1P04049 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
RAF1P04049 AC099677.2-201ENST00000436385 175 ntBASIC1.69□□□□□ -2.14
RAF1P04049 TRBVB-201ENST00000477100 408 ntBASIC1.69□□□□□ -2.14
RAF1P04049 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.69□□□□□ -2.14
RAF1P04049 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.69□□□□□ -2.14
RAF1P04049 MIR3145-201ENST00000580727 82 ntBASIC1.69□□□□□ -2.14
RAF1P04049 AL353149.1-201ENST00000610667 244 ntBASIC1.69□□□□□ -2.14
RAF1P04049 AP001282.2-201ENST00000616149 309 ntBASIC1.69□□□□□ -2.14
RAF1P04049 7SK.10-201ENST00000621414 298 ntBASIC1.69□□□□□ -2.14
RAF1P04049 RNU6-290P-201ENST00000365212 101 ntBASIC1.68□□□□□ -2.14
RAF1P04049 Y_RNA.418-201ENST00000384029 102 ntBASIC1.68□□□□□ -2.14
RAF1P04049 Y_RNA.569-201ENST00000384749 103 ntBASIC1.68□□□□□ -2.14
RAF1P04049 MIR1253-201ENST00000408273 105 ntBASIC1.68□□□□□ -2.14
RAF1P04049 MIR1302-6-201ENST00000408466 90 ntBASIC1.68□□□□□ -2.14
RAF1P04049 RNA5SP100-201ENST00000410903 110 ntBASIC1.68□□□□□ -2.14
RAF1P04049 RNA5SP59-201ENST00000410922 110 ntBASIC1.68□□□□□ -2.14
RAF1P04049 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.68□□□□□ -2.14
RAF1P04049 POLR2KP2-201ENST00000438155 177 ntBASIC1.68□□□□□ -2.14
RAF1P04049 MRPS10P1-201ENST00000448483 130 ntBASIC1.68□□□□□ -2.14
RAF1P04049 SNORA25.15-201ENST00000516487 89 ntBASIC1.68□□□□□ -2.14
RAF1P04049 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.68□□□□□ -2.14
RAF1P04049 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.68□□□□□ -2.14
RAF1P04049 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.68□□□□□ -2.14
RAF1P04049 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.68□□□□□ -2.14
RAF1P04049 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.68□□□□□ -2.14
RAF1P04049 MIR4713-201ENST00000582691 75 ntBASIC1.68□□□□□ -2.14
RAF1P04049 DEFB117-201ENST00000602356 141 ntBASIC1.68□□□□□ -2.14
RAF1P04049 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.68□□□□□ -2.14
RAF1P04049 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.68□□□□□ -2.14
RAF1P04049 MIR7111-201ENST00000619751 72 ntBASIC1.68□□□□□ -2.14
RAF1P04049 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.68□□□□□ -2.14
RAF1P04049 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.68□□□□□ -2.14
RAF1P04049 AC006435.5-201ENST00000624486 112 ntBASIC1.68□□□□□ -2.14
RAF1P04049 AC010615.1-201ENST00000594254 1764 ntBASIC1.67□□□□□ -2.14
RAF1P04049 SNORA33-201ENST00000363664 130 ntBASIC1.67□□□□□ -2.14
RAF1P04049 MIR873-201ENST00000401120 77 ntBASIC1.67□□□□□ -2.14
RAF1P04049 MIR1302-3-201ENST00000408128 138 ntBASIC1.67□□□□□ -2.14
RAF1P04049 RNU2-61P-201ENST00000411069 191 ntBASIC1.67□□□□□ -2.14
RAF1P04049 AC009310.1-201ENST00000414414 451 ntBASIC1.67□□□□□ -2.14
RAF1P04049 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.67□□□□□ -2.14
RAF1P04049 SUMO1P2-201ENST00000452524 304 ntBASIC1.67□□□□□ -2.14
RAF1P04049 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.67□□□□□ -2.14
RAF1P04049 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.67□□□□□ -2.14
RAF1P04049 RNA5SP20-201ENST00000515976 84 ntBASIC1.67□□□□□ -2.14
RAF1P04049 RNU6-1146P-201ENST00000516282 102 ntBASIC1.67□□□□□ -2.14
RAF1P04049 RNU6-1338P-201ENST00000516328 91 ntBASIC1.67□□□□□ -2.14
RAF1P04049 AC023157.2-201ENST00000540596 141 ntBASIC1.67□□□□□ -2.14
RAF1P04049 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.67□□□□□ -2.14
RAF1P04049 U4.1-201ENST00000620349 87 ntBASIC1.67□□□□□ -2.14
RAF1P04049 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.66□□□□□ -2.14
RAF1P04049 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RAF1P04049 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
RAF1P04049 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RAF1P04049 SNORD114-7-201ENST00000362520 77 ntBASIC1.66□□□□□ -2.14
RAF1P04049 RNU1-96P-201ENST00000364163 162 ntBASIC1.66□□□□□ -2.14
RAF1P04049 Y_RNA.237-201ENST00000364439 102 ntBASIC1.66□□□□□ -2.14
RAF1P04049 RNA5SP190-201ENST00000365222 118 ntBASIC1.66□□□□□ -2.14
RAF1P04049 RNU6-407P-201ENST00000365280 104 ntBASIC1.66□□□□□ -2.14
RAF1P04049 Y_RNA.452-201ENST00000384202 108 ntBASIC1.66□□□□□ -2.14
RAF1P04049 RNU6-505P-201ENST00000384427 107 ntBASIC1.66□□□□□ -2.14
RAF1P04049 Y_RNA.518-201ENST00000384552 113 ntBASIC1.66□□□□□ -2.14
RAF1P04049 RNA5SP467-201ENST00000391274 118 ntBASIC1.66□□□□□ -2.14
RAF1P04049 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.66□□□□□ -2.14
RAF1P04049 RPS27P22-201ENST00000478056 241 ntBASIC1.66□□□□□ -2.14
RAF1P04049 AC010409.1-201ENST00000487382 476 ntBASIC1.66□□□□□ -2.14
RAF1P04049 DEFB108E-201ENST00000524692 240 ntBASIC1.66□□□□□ -2.14
RAF1P04049 SUB1P4-201ENST00000566062 339 ntBASIC1.66□□□□□ -2.14
RAF1P04049 AC022254.1-201ENST00000567857 235 ntBASIC1.66□□□□□ -2.14
RAF1P04049 AC024614.2-201ENST00000577584 372 ntBASIC1.66□□□□□ -2.14
RAF1P04049 MIR3149-201ENST00000584629 83 ntBASIC1.66□□□□□ -2.14
RAF1P04049 AC069114.2-201ENST00000604699 304 ntBASIC1.66□□□□□ -2.14
RAF1P04049 U6.73-201ENST00000619194 103 ntBASIC1.66□□□□□ -2.14
RAF1P04049 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.66□□□□□ -2.14
RAF1P04049 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.66□□□□□ -2.14
RAF1P04049 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.65□□□□□ -2.14
RAF1P04049 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
RAF1P04049 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
RAF1P04049 RNU4-80P-201ENST00000363200 141 ntBASIC1.65□□□□□ -2.15
RAF1P04049 RNY1P10-201ENST00000363268 113 ntBASIC1.65□□□□□ -2.15
RAF1P04049 Y_RNA.136-201ENST00000363444 102 ntBASIC1.65□□□□□ -2.15
RAF1P04049 Y_RNA.193-201ENST00000363979 102 ntBASIC1.65□□□□□ -2.15
RAF1P04049 Y_RNA.269-201ENST00000364685 89 ntBASIC1.65□□□□□ -2.15
RAF1P04049 Y_RNA.556-201ENST00000384677 113 ntBASIC1.65□□□□□ -2.15
RAF1P04049 SNORA17.3-201ENST00000391159 129 ntBASIC1.65□□□□□ -2.15
RAF1P04049 MTCO1P5-201ENST00000433573 344 ntBASIC1.65□□□□□ -2.15
RAF1P04049 RPS26P55-201ENST00000471178 356 ntBASIC1.65□□□□□ -2.15
RAF1P04049 AC107393.1-201ENST00000512403 346 ntBASIC1.65□□□□□ -2.15
RAF1P04049 Y_RNA.668-201ENST00000516233 93 ntBASIC1.65□□□□□ -2.15
RAF1P04049 SNORA31.17-201ENST00000516953 127 ntBASIC1.65□□□□□ -2.15
RAF1P04049 RNU2-31P-201ENST00000516954 155 ntBASIC1.65□□□□□ -2.15
RAF1P04049 SCARNA24.2-201ENST00000516968 130 ntBASIC1.65□□□□□ -2.15
RAF1P04049 RNU7-128P-201ENST00000517247 62 ntBASIC1.65□□□□□ -2.15
RAF1P04049 AL137100.2-201ENST00000555786 315 ntBASIC1.65□□□□□ -2.15
RAF1P04049 MIR4438-201ENST00000585271 93 ntBASIC1.65□□□□□ -2.15
RAF1P04049 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.65□□□□□ -2.15
RAF1P04049 U6.108-201ENST00000637764 58 ntBASIC1.65□□□□□ -2.15
RAF1P04049 Y_RNA.172-201ENST00000363765 102 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms