Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RNU6-1198P-201ENST00000516904 67 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 DEFB131C-201ENST00000528817 165 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 AC006199.1-201ENST00000548728 219 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 AC233702.2-202ENST00000562547 291 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 AC090897.2-201ENST00000581715 130 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 AC073308.1-201ENST00000623696 305 ntBASIC1.88□□□□□ -2.11
COL2A1P02458 snoU2_19.1-201ENST00000362361 80 ntBASIC1.87□□□□□ -2.11
COL2A1P02458 RNU6-801P-201ENST00000364087 105 ntBASIC1.87□□□□□ -2.11
COL2A1P02458 Y_RNA.230-201ENST00000364348 109 ntBASIC1.87□□□□□ -2.11
COL2A1P02458 Y_RNA.261-201ENST00000364631 102 ntBASIC1.87□□□□□ -2.11
COL2A1P02458 RNU4-52P-201ENST00000384209 138 ntBASIC1.87□□□□□ -2.11
COL2A1P02458 SNORA46.1-201ENST00000391069 153 ntBASIC1.87□□□□□ -2.11
COL2A1P02458 SNORA12-201ENST00000391162 147 ntBASIC1.87□□□□□ -2.11
COL2A1P02458 AC078809.1-201ENST00000427601 140 ntBASIC1.87□□□□□ -2.11
COL2A1P02458 AL161651.1-201ENST00000440882 223 ntBASIC1.87□□□□□ -2.11
COL2A1P02458 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.87□□□□□ -2.11
COL2A1P02458 AC009474.2-201ENST00000451383 136 ntBASIC1.87□□□□□ -2.11
COL2A1P02458 RNU6-453P-201ENST00000516819 85 ntBASIC1.87□□□□□ -2.11
COL2A1P02458 RNA5SP364-201ENST00000516938 78 ntBASIC1.87□□□□□ -2.11
COL2A1P02458 AC021231.3-201ENST00000558497 370 ntBASIC1.87□□□□□ -2.11
COL2A1P02458 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.87□□□□□ -2.11
COL2A1P02458 AC099654.7-201ENST00000635788 2127 ntBASIC1.86□□□□□ -2.11
COL2A1P02458 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.86□□□□□ -2.11
COL2A1P02458 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
COL2A1P02458 Y_RNA.24-201ENST00000362508 103 ntBASIC1.86□□□□□ -2.11
COL2A1P02458 RNU6-60P-201ENST00000364792 103 ntBASIC1.86□□□□□ -2.11
COL2A1P02458 Y_RNA.293-201ENST00000364908 93 ntBASIC1.86□□□□□ -2.11
COL2A1P02458 RNU6-622P-201ENST00000384272 103 ntBASIC1.86□□□□□ -2.11
COL2A1P02458 SNORA22C-201ENST00000384614 134 ntBASIC1.86□□□□□ -2.11
COL2A1P02458 U3.40-201ENST00000408706 208 ntBASIC1.86□□□□□ -2.11
COL2A1P02458 RN7SKP61-201ENST00000410642 295 ntBASIC1.86□□□□□ -2.11
COL2A1P02458 NDUFS5P4-201ENST00000412983 318 ntBASIC1.86□□□□□ -2.11
COL2A1P02458 HMGN2P19-201ENST00000425149 265 ntBASIC1.86□□□□□ -2.11
COL2A1P02458 AL135790.2-201ENST00000437701 267 ntBASIC1.86□□□□□ -2.11
COL2A1P02458 RPS20P10-201ENST00000451209 253 ntBASIC1.86□□□□□ -2.11
COL2A1P02458 AC090515.1-201ENST00000465295 476 ntBASIC1.86□□□□□ -2.11
COL2A1P02458 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.86□□□□□ -2.11
COL2A1P02458 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.86□□□□□ -2.11
COL2A1P02458 RNA5SP54-201ENST00000516951 92 ntBASIC1.86□□□□□ -2.11
COL2A1P02458 SUMO2P18-201ENST00000518873 252 ntBASIC1.86□□□□□ -2.11
COL2A1P02458 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.86□□□□□ -2.11
COL2A1P02458 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.86□□□□□ -2.11
COL2A1P02458 SNORD53B-201ENST00000577887 78 ntBASIC1.86□□□□□ -2.11
COL2A1P02458 MIR4421-201ENST00000578133 69 ntBASIC1.86□□□□□ -2.11
COL2A1P02458 MIR3674-201ENST00000636576 68 ntBASIC1.86□□□□□ -2.11
COL2A1P02458 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL2A1P02458 Y_RNA.7-201ENST00000362352 102 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 RNU6-1180P-201ENST00000364935 107 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 RNU6-81P-201ENST00000365608 104 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 SNORA18.2-201ENST00000383865 132 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 RNY1P5-201ENST00000383890 115 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 RNU6-449P-201ENST00000383914 107 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 Y_RNA.488-201ENST00000384403 102 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 RNU6-959P-201ENST00000384671 107 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 MIR517C-201ENST00000385103 95 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 MT-TT-201ENST00000387460 66 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 RNU6-1154P-201ENST00000391001 104 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 SNORA26.5-201ENST00000391215 123 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 RNU2-54P-201ENST00000410299 190 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 RNU6-735P-201ENST00000410612 107 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 AL390729.2-201ENST00000416137 156 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 AC096649.2-201ENST00000416186 393 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 AC004386.2-201ENST00000441858 148 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 RPL31P41-201ENST00000477967 372 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.85□□□□□ -2.11
COL2A1P02458 RNU2-44P-201ENST00000516795 194 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 RNU6-1234P-201ENST00000516877 103 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 MIR3923-201ENST00000579521 83 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 AC090616.3-201ENST00000582184 217 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 MIR5006-201ENST00000583027 110 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 MIR6515-201ENST00000619843 57 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 MIR3658-201ENST00000636291 56 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.85□□□□□ -2.11
COL2A1P02458 AC092268.1-201ENST00000342691 405 ntBASIC1.84□□□□□ -2.11
COL2A1P02458 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
COL2A1P02458 RNU6-1272P-201ENST00000362776 107 ntBASIC1.84□□□□□ -2.11
COL2A1P02458 Y_RNA.172-201ENST00000363765 102 ntBASIC1.84□□□□□ -2.11
COL2A1P02458 SNORD115-8-201ENST00000363856 82 ntBASIC1.84□□□□□ -2.11
COL2A1P02458 Y_RNA.215-201ENST00000364204 112 ntBASIC1.84□□□□□ -2.11
COL2A1P02458 snoU2_19.4-201ENST00000364329 80 ntBASIC1.84□□□□□ -2.11
COL2A1P02458 SNORD115-38-201ENST00000365037 82 ntBASIC1.84□□□□□ -2.11
COL2A1P02458 Y_RNA.357-201ENST00000365487 109 ntBASIC1.84□□□□□ -2.11
COL2A1P02458 RNU6-22P-201ENST00000384355 107 ntBASIC1.84□□□□□ -2.11
COL2A1P02458 RNU6-342P-201ENST00000384521 104 ntBASIC1.84□□□□□ -2.11
COL2A1P02458 RNU6-1117P-201ENST00000384525 104 ntBASIC1.84□□□□□ -2.11
COL2A1P02458 RNU6-1081P-201ENST00000384537 107 ntBASIC1.84□□□□□ -2.11
COL2A1P02458 MIR144-201ENST00000384886 86 ntBASIC1.84□□□□□ -2.11
COL2A1P02458 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.84□□□□□ -2.11
COL2A1P02458 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.84□□□□□ -2.11
COL2A1P02458 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.84□□□□□ -2.11
COL2A1P02458 AC112771.1-201ENST00000463581 102 ntBASIC1.84□□□□□ -2.11
COL2A1P02458 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.84□□□□□ -2.11
COL2A1P02458 SCARNA8-201ENST00000515924 131 ntBASIC1.84□□□□□ -2.11
COL2A1P02458 Y_RNA.797-201ENST00000515977 94 ntBASIC1.84□□□□□ -2.11
COL2A1P02458 SNORA25.12-201ENST00000516202 82 ntBASIC1.84□□□□□ -2.11
COL2A1P02458 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.84□□□□□ -2.11
COL2A1P02458 NACAP3-201ENST00000552100 481 ntBASIC1.84□□□□□ -2.11
COL2A1P02458 AC121758.2-201ENST00000553271 193 ntBASIC1.84□□□□□ -2.11
COL2A1P02458 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms