Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
LDLRP01130 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
LDLRP01130 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2□□□□□ -2.09
LDLRP01130 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2□□□□□ -2.09
LDLRP01130 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
LDLRP01130 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
LDLRP01130 SNORD87-201ENST00000364849 89 ntBASIC2□□□□□ -2.09
LDLRP01130 Y_RNA.332-201ENST00000365271 113 ntBASIC2□□□□□ -2.09
LDLRP01130 RNU6-793P-201ENST00000384233 104 ntBASIC2□□□□□ -2.09
LDLRP01130 SNORD14D-201ENST00000384390 87 ntBASIC2□□□□□ -2.09
LDLRP01130 MIR221-201ENST00000385135 110 ntBASIC2□□□□□ -2.09
LDLRP01130 AC123900.1-201ENST00000420390 96 ntBASIC2□□□□□ -2.09
LDLRP01130 AC005042.3-201ENST00000453230 174 ntBASIC2□□□□□ -2.09
LDLRP01130 RNU6-625P-201ENST00000459412 107 ntBASIC2□□□□□ -2.09
LDLRP01130 AC074133.1-201ENST00000515696 183 ntBASIC2□□□□□ -2.09
LDLRP01130 RNA5SP200-201ENST00000516360 103 ntBASIC2□□□□□ -2.09
LDLRP01130 Y_RNA.679-201ENST00000516416 91 ntBASIC2□□□□□ -2.09
LDLRP01130 RNA5SP137-201ENST00000516833 135 ntBASIC2□□□□□ -2.09
LDLRP01130 Y_RNA.703-201ENST00000516846 111 ntBASIC2□□□□□ -2.09
LDLRP01130 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
LDLRP01130 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2□□□□□ -2.09
LDLRP01130 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2□□□□□ -2.09
LDLRP01130 MIR4753-201ENST00000585119 83 ntBASIC2□□□□□ -2.09
LDLRP01130 AC037487.3-201ENST00000606668 112 ntBASIC2□□□□□ -2.09
LDLRP01130 SNORD11B-201ENST00000607707 90 ntBASIC2□□□□□ -2.09
LDLRP01130 snoU18.1-201ENST00000629629 71 ntBASIC2□□□□□ -2.09
LDLRP01130 U6.106-201ENST00000636360 105 ntBASIC2□□□□□ -2.09
LDLRP01130 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
LDLRP01130 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
LDLRP01130 RNU6-653P-201ENST00000363074 106 ntBASIC1.99□□□□□ -2.09
LDLRP01130 RNU4-80P-201ENST00000363200 141 ntBASIC1.99□□□□□ -2.09
LDLRP01130 RNU6-1020P-201ENST00000363684 107 ntBASIC1.99□□□□□ -2.09
LDLRP01130 RNU6-454P-201ENST00000364292 107 ntBASIC1.99□□□□□ -2.09
LDLRP01130 Y_RNA.233-201ENST00000364407 101 ntBASIC1.99□□□□□ -2.09
LDLRP01130 Y_RNA.240-201ENST00000364469 95 ntBASIC1.99□□□□□ -2.09
LDLRP01130 Y_RNA.415-201ENST00000384012 112 ntBASIC1.99□□□□□ -2.09
LDLRP01130 RNU6-418P-201ENST00000384035 107 ntBASIC1.99□□□□□ -2.09
LDLRP01130 Y_RNA.498-201ENST00000384460 102 ntBASIC1.99□□□□□ -2.09
LDLRP01130 MIR300-201ENST00000401138 83 ntBASIC1.99□□□□□ -2.09
LDLRP01130 MIR1283-1-201ENST00000408494 87 ntBASIC1.99□□□□□ -2.09
LDLRP01130 SNORA11.4-201ENST00000408823 129 ntBASIC1.99□□□□□ -2.09
LDLRP01130 RNU6-394P-201ENST00000410735 107 ntBASIC1.99□□□□□ -2.09
LDLRP01130 HMGN2P38-201ENST00000423806 265 ntBASIC1.99□□□□□ -2.09
LDLRP01130 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.99□□□□□ -2.09
LDLRP01130 RNU6-1219P-201ENST00000516143 112 ntBASIC1.99□□□□□ -2.09
LDLRP01130 RNU6-346P-201ENST00000516288 111 ntBASIC1.99□□□□□ -2.09
LDLRP01130 RNU6-344P-201ENST00000516635 111 ntBASIC1.99□□□□□ -2.09
LDLRP01130 MTND5P41-201ENST00000517498 206 ntBASIC1.99□□□□□ -2.09
LDLRP01130 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.99□□□□□ -2.09
LDLRP01130 MRPS18CP4-201ENST00000535821 231 ntBASIC1.99□□□□□ -2.09
LDLRP01130 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.99□□□□□ -2.09
LDLRP01130 MIR3935-201ENST00000583472 104 ntBASIC1.99□□□□□ -2.09
LDLRP01130 AC073349.3-201ENST00000617616 186 ntBASIC1.99□□□□□ -2.09
LDLRP01130 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.98□□□□□ -2.09
LDLRP01130 RNU1-62P-201ENST00000362599 164 ntBASIC1.98□□□□□ -2.09
LDLRP01130 Y_RNA.99-201ENST00000363138 105 ntBASIC1.98□□□□□ -2.09
LDLRP01130 RNU6-514P-201ENST00000384208 107 ntBASIC1.98□□□□□ -2.09
LDLRP01130 RNU6-804P-201ENST00000384286 107 ntBASIC1.98□□□□□ -2.09
LDLRP01130 AL023284.1-201ENST00000403956 276 ntBASIC1.98□□□□□ -2.09
LDLRP01130 RNA5SP504-201ENST00000410676 117 ntBASIC1.98□□□□□ -2.09
LDLRP01130 RNU6-1135P-201ENST00000411083 103 ntBASIC1.98□□□□□ -2.09
LDLRP01130 BX510359.4-201ENST00000423750 193 ntBASIC1.98□□□□□ -2.09
LDLRP01130 AC016717.1-201ENST00000448918 286 ntBASIC1.98□□□□□ -2.09
LDLRP01130 AC245102.2-201ENST00000448956 180 ntBASIC1.98□□□□□ -2.09
LDLRP01130 NDUFB4P10-201ENST00000452541 359 ntBASIC1.98□□□□□ -2.09
LDLRP01130 AC016925.1-201ENST00000458303 298 ntBASIC1.98□□□□□ -2.09
LDLRP01130 CYCSP23-201ENST00000519781 313 ntBASIC1.98□□□□□ -2.09
LDLRP01130 AP005660.1-201ENST00000522972 293 ntBASIC1.98□□□□□ -2.09
LDLRP01130 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.98□□□□□ -2.09
LDLRP01130 DEFB117-201ENST00000602356 141 ntBASIC1.98□□□□□ -2.09
LDLRP01130 AL008718.3-201ENST00000610217 321 ntBASIC1.98□□□□□ -2.09
LDLRP01130 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.98□□□□□ -2.09
LDLRP01130 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.98□□□□□ -2.09
LDLRP01130 AL365265.1-201ENST00000621045 234 ntBASIC1.98□□□□□ -2.09
LDLRP01130 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.97□□□□□ -2.09
LDLRP01130 AC068700.1-201ENST00000565862 3754 ntBASIC1.97□□□□□ -2.09
LDLRP01130 RNU5F-3P-201ENST00000363767 117 ntBASIC1.97□□□□□ -2.09
LDLRP01130 SNORD114-6-201ENST00000364393 72 ntBASIC1.97□□□□□ -2.09
LDLRP01130 RNU6-1164P-201ENST00000364428 107 ntBASIC1.97□□□□□ -2.09
LDLRP01130 Y_RNA.304-201ENST00000365011 112 ntBASIC1.97□□□□□ -2.09
LDLRP01130 Y_RNA.308-201ENST00000365043 101 ntBASIC1.97□□□□□ -2.09
LDLRP01130 SNORD113-1-201ENST00000365321 69 ntBASIC1.97□□□□□ -2.09
LDLRP01130 RNU6-211P-201ENST00000384047 107 ntBASIC1.97□□□□□ -2.09
LDLRP01130 Y_RNA.435-201ENST00000384095 112 ntBASIC1.97□□□□□ -2.09
LDLRP01130 RNU6-160P-201ENST00000384591 107 ntBASIC1.97□□□□□ -2.09
LDLRP01130 HMGN2P39-201ENST00000398005 273 ntBASIC1.97□□□□□ -2.09
LDLRP01130 RNU2-54P-201ENST00000410299 190 ntBASIC1.97□□□□□ -2.09
LDLRP01130 CYCSP49-201ENST00000420810 319 ntBASIC1.97□□□□□ -2.09
LDLRP01130 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.97□□□□□ -2.09
LDLRP01130 AC010531.2-201ENST00000465012 153 ntBASIC1.97□□□□□ -2.09
LDLRP01130 HMGN2P9-201ENST00000476875 229 ntBASIC1.97□□□□□ -2.09
LDLRP01130 Y_RNA.662-201ENST00000516028 97 ntBASIC1.97□□□□□ -2.09
LDLRP01130 RNU7-200P-201ENST00000516105 62 ntBASIC1.97□□□□□ -2.09
LDLRP01130 RNU6-107P-201ENST00000516643 102 ntBASIC1.97□□□□□ -2.09
LDLRP01130 RNU2-12P-201ENST00000517216 168 ntBASIC1.97□□□□□ -2.09
LDLRP01130 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.97□□□□□ -2.09
LDLRP01130 MIR6845-201ENST00000613182 61 ntBASIC1.97□□□□□ -2.09
LDLRP01130 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
LDLRP01130 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.97□□□□□ -2.09
LDLRP01130 CENPCP1-201ENST00000533085 2578 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms