Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 AC093019.1-201ENST00000443135 252 ntBASIC0.69□□□□□ -2.3
RAB3DO95716 SUMO1P2-201ENST00000452524 304 ntBASIC0.69□□□□□ -2.3
RAB3DO95716 AC245047.8-201ENST00000456455 284 ntBASIC0.69□□□□□ -2.3
RAB3DO95716 RNU7-169P-201ENST00000459456 61 ntBASIC0.69□□□□□ -2.3
RAB3DO95716 CYCTP-201ENST00000504253 315 ntBASIC0.69□□□□□ -2.3
RAB3DO95716 SNORA25.10-201ENST00000515926 124 ntBASIC0.69□□□□□ -2.3
RAB3DO95716 RNU6-966P-201ENST00000516479 104 ntBASIC0.69□□□□□ -2.3
RAB3DO95716 RNU6-307P-201ENST00000516743 106 ntBASIC0.69□□□□□ -2.3
RAB3DO95716 AC136628.3-201ENST00000521868 290 ntBASIC0.69□□□□□ -2.3
RAB3DO95716 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.69□□□□□ -2.3
RAB3DO95716 FAM71BP1-201ENST00000604431 523 ntBASIC0.69□□□□□ -2.3
RAB3DO95716 AL391903.3-201ENST00000612158 163 ntBASIC0.69□□□□□ -2.3
RAB3DO95716 AC106800.4-201ENST00000614905 153 ntBASIC0.69□□□□□ -2.3
RAB3DO95716 SNORD114-7-201ENST00000362520 77 ntBASIC0.68□□□□□ -2.3
RAB3DO95716 RNU6-845P-201ENST00000362578 103 ntBASIC0.68□□□□□ -2.3
RAB3DO95716 Y_RNA.160-201ENST00000363677 92 ntBASIC0.68□□□□□ -2.3
RAB3DO95716 RNU6-310P-201ENST00000384655 107 ntBASIC0.68□□□□□ -2.3
RAB3DO95716 MIR516B2-201ENST00000385190 85 ntBASIC0.68□□□□□ -2.3
RAB3DO95716 MIR942-201ENST00000401111 86 ntBASIC0.68□□□□□ -2.3
RAB3DO95716 AL031003.1-201ENST00000404229 172 ntBASIC0.68□□□□□ -2.3
RAB3DO95716 MIR1298-201ENST00000408783 112 ntBASIC0.68□□□□□ -2.3
RAB3DO95716 RNU6-370P-201ENST00000411008 104 ntBASIC0.68□□□□□ -2.3
RAB3DO95716 AP1B1P2-201ENST00000416196 106 ntBASIC0.68□□□□□ -2.3
RAB3DO95716 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.68□□□□□ -2.3
RAB3DO95716 snoU13.26-201ENST00000459452 105 ntBASIC0.68□□□□□ -2.3
RAB3DO95716 RNU6-197P-201ENST00000516680 100 ntBASIC0.68□□□□□ -2.3
RAB3DO95716 AC011604.1-201ENST00000545978 196 ntBASIC0.68□□□□□ -2.3
RAB3DO95716 AC080078.3-201ENST00000605407 463 ntBASIC0.68□□□□□ -2.3
RAB3DO95716 AC098679.4-201ENST00000624241 654 ntBASIC0.68□□□□□ -2.3
RAB3DO95716 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.67□□□□□ -2.3
RAB3DO95716 Y_RNA.577-201ENST00000384794 101 ntBASIC0.67□□□□□ -2.3
RAB3DO95716 MIR532-201ENST00000385025 91 ntBASIC0.67□□□□□ -2.3
RAB3DO95716 MIR605-201ENST00000385078 83 ntBASIC0.67□□□□□ -2.3
RAB3DO95716 RNU6-1199P-201ENST00000411249 104 ntBASIC0.67□□□□□ -2.3
RAB3DO95716 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.67□□□□□ -2.3
RAB3DO95716 RPS20P10-201ENST00000451209 253 ntBASIC0.67□□□□□ -2.3
RAB3DO95716 AC005840.1-201ENST00000498412 377 ntBASIC0.67□□□□□ -2.3
RAB3DO95716 Y_RNA.691-201ENST00000516611 103 ntBASIC0.67□□□□□ -2.3
RAB3DO95716 MIR2355-201ENST00000517199 87 ntBASIC0.67□□□□□ -2.3
RAB3DO95716 AC090142.3-201ENST00000519012 385 ntBASIC0.67□□□□□ -2.3
RAB3DO95716 MIR4781-201ENST00000585250 76 ntBASIC0.67□□□□□ -2.3
RAB3DO95716 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.67□□□□□ -2.3
RAB3DO95716 AC011476.5-201ENST00000615594 130 ntBASIC0.67□□□□□ -2.3
RAB3DO95716 AC027279.3-201ENST00000625055 122 ntBASIC0.67□□□□□ -2.3
RAB3DO95716 AC023934.1-201ENST00000574529 2389 ntBASIC0.67□□□□□ -2.3
RAB3DO95716 SNORA25.3-201ENST00000363205 127 ntBASIC0.66□□□□□ -2.3
RAB3DO95716 RNU6-1188P-201ENST00000363795 107 ntBASIC0.66□□□□□ -2.3
RAB3DO95716 Y_RNA.279-201ENST00000364763 95 ntBASIC0.66□□□□□ -2.3
RAB3DO95716 RNU6-20P-201ENST00000384106 107 ntBASIC0.66□□□□□ -2.3
RAB3DO95716 MIR608-201ENST00000384820 100 ntBASIC0.66□□□□□ -2.3
RAB3DO95716 MIR625-201ENST00000385047 85 ntBASIC0.66□□□□□ -2.3
RAB3DO95716 SNORA75.6-201ENST00000391318 127 ntBASIC0.66□□□□□ -2.3
RAB3DO95716 AL390729.2-201ENST00000416137 156 ntBASIC0.66□□□□□ -2.3
RAB3DO95716 MLLT10P1-201ENST00000418346 262 ntBASIC0.66□□□□□ -2.3
RAB3DO95716 MRPS18CP6-201ENST00000423587 223 ntBASIC0.66□□□□□ -2.3
RAB3DO95716 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.66□□□□□ -2.3
RAB3DO95716 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.66□□□□□ -2.3
RAB3DO95716 RNU7-90P-201ENST00000459216 62 ntBASIC0.66□□□□□ -2.3
RAB3DO95716 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.66□□□□□ -2.3
RAB3DO95716 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.66□□□□□ -2.3
RAB3DO95716 AC240442.1-201ENST00000616055 283 ntBASIC0.66□□□□□ -2.3
RAB3DO95716 TPTEP1-208ENST00000636884 213 ntBASIC0.66□□□□□ -2.3
RAB3DO95716 MIR6866-201ENST00000638146 69 ntBASIC0.66□□□□□ -2.3
RAB3DO95716 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.66□□□□□ -2.3
RAB3DO95716 RNA5SP264-201ENST00000363115 107 ntBASIC0.65□□□□□ -2.31
RAB3DO95716 RNU6-626P-201ENST00000363354 107 ntBASIC0.65□□□□□ -2.31
RAB3DO95716 U8.5-201ENST00000364528 136 ntBASIC0.65□□□□□ -2.31
RAB3DO95716 SNORD81.2-201ENST00000365153 76 ntBASIC0.65□□□□□ -2.31
RAB3DO95716 Y_RNA.330-201ENST00000365230 109 ntBASIC0.65□□□□□ -2.31
RAB3DO95716 RNU6-890P-201ENST00000384121 107 ntBASIC0.65□□□□□ -2.31
RAB3DO95716 RNU6-1105P-201ENST00000384774 107 ntBASIC0.65□□□□□ -2.31
RAB3DO95716 RNU6-876P-201ENST00000391295 104 ntBASIC0.65□□□□□ -2.31
RAB3DO95716 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.65□□□□□ -2.31
RAB3DO95716 SNORA11.2-201ENST00000408318 127 ntBASIC0.65□□□□□ -2.31
RAB3DO95716 RNU2-54P-201ENST00000410299 190 ntBASIC0.65□□□□□ -2.31
RAB3DO95716 RPS3AP1-201ENST00000413190 320 ntBASIC0.65□□□□□ -2.31
RAB3DO95716 FGF7P6-202ENST00000451282 293 ntBASIC0.65□□□□□ -2.31
RAB3DO95716 Y_RNA.635-201ENST00000459041 101 ntBASIC0.65□□□□□ -2.31
RAB3DO95716 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.65□□□□□ -2.31
RAB3DO95716 RNU7-41P-201ENST00000515917 61 ntBASIC0.65□□□□□ -2.31
RAB3DO95716 RNU6-264P-201ENST00000517134 104 ntBASIC0.65□□□□□ -2.31
RAB3DO95716 AC006380.1-201ENST00000603598 186 ntBASIC0.65□□□□□ -2.31
RAB3DO95716 RNU6-324P-201ENST00000363957 106 ntBASIC0.64□□□□□ -2.31
RAB3DO95716 Y_RNA.253-201ENST00000364562 112 ntBASIC0.64□□□□□ -2.31
RAB3DO95716 Y_RNA.446-201ENST00000384178 104 ntBASIC0.64□□□□□ -2.31
RAB3DO95716 RNU6-708P-201ENST00000384217 107 ntBASIC0.64□□□□□ -2.31
RAB3DO95716 MIR452-201ENST00000385020 85 ntBASIC0.64□□□□□ -2.31
RAB3DO95716 MIR522-201ENST00000385071 87 ntBASIC0.64□□□□□ -2.31
RAB3DO95716 MT-TL1-201ENST00000386347 75 ntBASIC0.64□□□□□ -2.31
RAB3DO95716 RNU2-61P-201ENST00000411069 191 ntBASIC0.64□□□□□ -2.31
RAB3DO95716 MTCO3P10-201ENST00000455912 772 ntBASIC0.64□□□□□ -2.31
RAB3DO95716 SNORA70.12-201ENST00000516084 153 ntBASIC0.64□□□□□ -2.31
RAB3DO95716 RNU6-155P-201ENST00000516347 100 ntBASIC0.64□□□□□ -2.31
RAB3DO95716 RNU6-1012P-201ENST00000516606 109 ntBASIC0.64□□□□□ -2.31
RAB3DO95716 MTND4LP26-201ENST00000518144 282 ntBASIC0.64□□□□□ -2.31
RAB3DO95716 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.64□□□□□ -2.31
RAB3DO95716 AC023827.1-201ENST00000569247 97 ntBASIC0.64□□□□□ -2.31
RAB3DO95716 MIR4698-201ENST00000577795 80 ntBASIC0.64□□□□□ -2.31
RAB3DO95716 MIR4762-201ENST00000585261 75 ntBASIC0.64□□□□□ -2.31
RAB3DO95716 AC005176.2-201ENST00000596933 147 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms