Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.96□□□□□ -2.56
SIX6O95475 RNU6-1220P-201ENST00000517126 108 ntBASIC-0.96□□□□□ -2.56
SIX6O95475 NAMPTP3-201ENST00000569273 224 ntBASIC-0.96□□□□□ -2.56
SIX6O95475 MIR3681-201ENST00000580089 72 ntBASIC-0.96□□□□□ -2.56
SIX6O95475 AL163152.1-201ENST00000642001 374 ntBASIC-0.96□□□□□ -2.56
SIX6O95475 SNORA27.1-201ENST00000362604 124 ntBASIC-0.97□□□□□ -2.56
SIX6O95475 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.97□□□□□ -2.56
SIX6O95475 FCF1P9-201ENST00000412546 282 ntBASIC-0.97□□□□□ -2.56
SIX6O95475 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.97□□□□□ -2.56
SIX6O95475 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.97□□□□□ -2.56
SIX6O95475 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.97□□□□□ -2.56
SIX6O95475 RNU6-135P-201ENST00000516769 101 ntBASIC-0.97□□□□□ -2.56
SIX6O95475 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-0.97□□□□□ -2.56
SIX6O95475 AC006600.1-201ENST00000572529 153 ntBASIC-0.97□□□□□ -2.56
SIX6O95475 BNIP3P40-201ENST00000596017 556 ntBASIC-0.97□□□□□ -2.56
SIX6O95475 AL359999.1-201ENST00000604513 294 ntBASIC-0.97□□□□□ -2.56
SIX6O95475 AC121247.2-201ENST00000604776 136 ntBASIC-0.97□□□□□ -2.56
SIX6O95475 AC022306.2-201ENST00000617563 647 ntBASIC-0.97□□□□□ -2.56
SIX6O95475 AC127459.3-201ENST00000624328 466 ntBASIC-0.97□□□□□ -2.56
SIX6O95475 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.98□□□□□ -2.57
SIX6O95475 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.98□□□□□ -2.57
SIX6O95475 RNA5SP205-201ENST00000364653 136 ntBASIC-0.98□□□□□ -2.57
SIX6O95475 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.98□□□□□ -2.57
SIX6O95475 RNU6-117P-201ENST00000365415 107 ntBASIC-0.98□□□□□ -2.57
SIX6O95475 RNU6-533P-201ENST00000384144 107 ntBASIC-0.98□□□□□ -2.57
SIX6O95475 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.98□□□□□ -2.57
SIX6O95475 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.98□□□□□ -2.57
SIX6O95475 RNU6-136P-201ENST00000384663 107 ntBASIC-0.98□□□□□ -2.57
SIX6O95475 MTCO3P40-201ENST00000392516 676 ntBASIC-0.98□□□□□ -2.57
SIX6O95475 MCFD2P1-201ENST00000417812 300 ntBASIC-0.98□□□□□ -2.57
SIX6O95475 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.98□□□□□ -2.57
SIX6O95475 AC091959.1-201ENST00000495857 238 ntBASIC-0.98□□□□□ -2.57
SIX6O95475 AC010424.1-201ENST00000506336 297 ntBASIC-0.98□□□□□ -2.57
SIX6O95475 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.98□□□□□ -2.57
SIX6O95475 AC091144.1-201ENST00000519573 138 ntBASIC-0.98□□□□□ -2.57
SIX6O95475 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.98□□□□□ -2.57
SIX6O95475 Z94722.1-201ENST00000604328 474 ntBASIC-0.98□□□□□ -2.57
SIX6O95475 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.98□□□□□ -2.57
SIX6O95475 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-0.98□□□□□ -2.57
SIX6O95475 SNORD115-8-201ENST00000363856 82 ntBASIC-0.99□□□□□ -2.57
SIX6O95475 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.99□□□□□ -2.57
SIX6O95475 SNORD115-38-201ENST00000365037 82 ntBASIC-0.99□□□□□ -2.57
SIX6O95475 MIR7-2-201ENST00000384970 110 ntBASIC-0.99□□□□□ -2.57
SIX6O95475 SNORD73A-201ENST00000386062 65 ntBASIC-0.99□□□□□ -2.57
SIX6O95475 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.99□□□□□ -2.57
SIX6O95475 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.99□□□□□ -2.57
SIX6O95475 RPS27AP14-201ENST00000422868 454 ntBASIC-0.99□□□□□ -2.57
SIX6O95475 AC091179.3-201ENST00000474761 144 ntBASIC-0.99□□□□□ -2.57
SIX6O95475 MTCO3P23-201ENST00000561363 289 ntBASIC-0.99□□□□□ -2.57
SIX6O95475 MIR6740-201ENST00000618268 113 ntBASIC-0.99□□□□□ -2.57
SIX6O95475 Y_RNA.367-201ENST00000365544 101 ntBASIC-1□□□□□ -2.57
SIX6O95475 RNU6-1127P-201ENST00000384580 107 ntBASIC-1□□□□□ -2.57
SIX6O95475 MIR522-201ENST00000385071 87 ntBASIC-1□□□□□ -2.57
SIX6O95475 MIR873-201ENST00000401120 77 ntBASIC-1□□□□□ -2.57
SIX6O95475 Y_RNA.617-201ENST00000410920 90 ntBASIC-1□□□□□ -2.57
SIX6O95475 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1□□□□□ -2.57
SIX6O95475 MTND3P1-201ENST00000441336 220 ntBASIC-1□□□□□ -2.57
SIX6O95475 U8.21-201ENST00000459536 136 ntBASIC-1□□□□□ -2.57
SIX6O95475 MIR3941-201ENST00000582572 103 ntBASIC-1□□□□□ -2.57
SIX6O95475 AC087685.1-201ENST00000587507 141 ntBASIC-1□□□□□ -2.57
SIX6O95475 MIR4791-201ENST00000607666 84 ntBASIC-1□□□□□ -2.57
SIX6O95475 U7.6-201ENST00000610841 64 ntBASIC-1□□□□□ -2.57
SIX6O95475 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.01□□□□□ -2.57
SIX6O95475 Y_RNA.302-201ENST00000364997 102 ntBASIC-1.01□□□□□ -2.57
SIX6O95475 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.01□□□□□ -2.57
SIX6O95475 SNORA20.2-201ENST00000383922 131 ntBASIC-1.01□□□□□ -2.57
SIX6O95475 Y_RNA.466-201ENST00000384294 113 ntBASIC-1.01□□□□□ -2.57
SIX6O95475 SNORD28-201ENST00000384706 75 ntBASIC-1.01□□□□□ -2.57
SIX6O95475 MIR518F-201ENST00000384973 87 ntBASIC-1.01□□□□□ -2.57
SIX6O95475 SNORA3B-201ENST00000391305 131 ntBASIC-1.01□□□□□ -2.57
SIX6O95475 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.01□□□□□ -2.57
SIX6O95475 RPL23AP75-201ENST00000491601 451 ntBASIC-1.01□□□□□ -2.57
SIX6O95475 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.01□□□□□ -2.57
SIX6O95475 AP001328.1-201ENST00000528550 176 ntBASIC-1.01□□□□□ -2.57
SIX6O95475 AC138749.4-201ENST00000563970 127 ntBASIC-1.01□□□□□ -2.57
SIX6O95475 MIR4677-201ENST00000584153 80 ntBASIC-1.01□□□□□ -2.57
SIX6O95475 MIR6507-201ENST00000613630 70 ntBASIC-1.01□□□□□ -2.57
SIX6O95475 MIR7111-201ENST00000619751 72 ntBASIC-1.01□□□□□ -2.57
SIX6O95475 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.01□□□□□ -2.57
SIX6O95475 AC126544.2-201ENST00000625174 749 ntBASIC-1.01□□□□□ -2.57
SIX6O95475 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.01□□□□□ -2.57
SIX6O95475 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.02□□□□□ -2.57
SIX6O95475 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.02□□□□□ -2.57
SIX6O95475 MTCYBP4-201ENST00000401524 249 ntBASIC-1.02□□□□□ -2.57
SIX6O95475 MIR548L-201ENST00000408303 86 ntBASIC-1.02□□□□□ -2.57
SIX6O95475 AC090844.1-201ENST00000422019 156 ntBASIC-1.02□□□□□ -2.57
SIX6O95475 RNU6-329P-201ENST00000459618 107 ntBASIC-1.02□□□□□ -2.57
SIX6O95475 AC107297.1-201ENST00000459991 176 ntBASIC-1.02□□□□□ -2.57
SIX6O95475 RNU6-107P-201ENST00000516643 102 ntBASIC-1.02□□□□□ -2.57
SIX6O95475 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.02□□□□□ -2.57
SIX6O95475 MIR3684-201ENST00000579779 74 ntBASIC-1.02□□□□□ -2.57
SIX6O95475 MIR4639-201ENST00000584938 69 ntBASIC-1.02□□□□□ -2.57
SIX6O95475 AC080013.3-201ENST00000606839 578 ntBASIC-1.02□□□□□ -2.57
SIX6O95475 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-1.02□□□□□ -2.57
SIX6O95475 AC134878.1-201ENST00000619901 243 ntBASIC-1.02□□□□□ -2.57
SIX6O95475 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.03□□□□□ -2.57
SIX6O95475 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.03□□□□□ -2.57
SIX6O95475 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.03□□□□□ -2.57
SIX6O95475 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.03□□□□□ -2.57
SIX6O95475 MTATP6P26-201ENST00000445926 662 ntBASIC-1.03□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms