Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 RNU7-30P-201ENST00000516835 62 ntBASIC0.82□□□□□ -2.28
UPK3AO75631 RNU6-1213P-201ENST00000517075 94 ntBASIC0.82□□□□□ -2.28
UPK3AO75631 RNU6-1116P-201ENST00000517269 99 ntBASIC0.82□□□□□ -2.28
UPK3AO75631 AC211469.2-201ENST00000605461 205 ntBASIC0.82□□□□□ -2.28
UPK3AO75631 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
UPK3AO75631 RNU4-41P-201ENST00000364426 143 ntBASIC0.81□□□□□ -2.28
UPK3AO75631 RNU6-99P-201ENST00000364721 107 ntBASIC0.81□□□□□ -2.28
UPK3AO75631 RNU6-117P-201ENST00000365415 107 ntBASIC0.81□□□□□ -2.28
UPK3AO75631 RNU5A-5P-201ENST00000411054 116 ntBASIC0.81□□□□□ -2.28
UPK3AO75631 FCF1P9-201ENST00000412546 282 ntBASIC0.81□□□□□ -2.28
UPK3AO75631 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.81□□□□□ -2.28
UPK3AO75631 AC002429.1-201ENST00000437672 148 ntBASIC0.81□□□□□ -2.28
UPK3AO75631 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.81□□□□□ -2.28
UPK3AO75631 SUMO1P2-201ENST00000452524 304 ntBASIC0.81□□□□□ -2.28
UPK3AO75631 MIR2053-201ENST00000459295 91 ntBASIC0.81□□□□□ -2.28
UPK3AO75631 AC116353.2-201ENST00000505332 712 ntBASIC0.81□□□□□ -2.28
UPK3AO75631 PDCD5P2-201ENST00000507570 312 ntBASIC0.81□□□□□ -2.28
UPK3AO75631 AC011604.1-201ENST00000545978 196 ntBASIC0.81□□□□□ -2.28
UPK3AO75631 AC005828.6-201ENST00000606610 232 ntBASIC0.81□□□□□ -2.28
UPK3AO75631 MIR7111-201ENST00000619751 72 ntBASIC0.81□□□□□ -2.28
UPK3AO75631 MIR6767-201ENST00000637302 66 ntBASIC0.81□□□□□ -2.28
UPK3AO75631 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
UPK3AO75631 MIRLET7C-201ENST00000362160 84 ntBASIC0.8□□□□□ -2.28
UPK3AO75631 RNU6-1301P-201ENST00000362724 104 ntBASIC0.8□□□□□ -2.28
UPK3AO75631 RNU6-1310P-201ENST00000384153 107 ntBASIC0.8□□□□□ -2.28
UPK3AO75631 MIR532-201ENST00000385025 91 ntBASIC0.8□□□□□ -2.28
UPK3AO75631 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
UPK3AO75631 Y_RNA.621-201ENST00000411065 96 ntBASIC0.8□□□□□ -2.28
UPK3AO75631 MTND1P4-201ENST00000435196 415 ntBASIC0.8□□□□□ -2.28
UPK3AO75631 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.8□□□□□ -2.28
UPK3AO75631 RPS4XP11-201ENST00000446897 772 ntBASIC0.8□□□□□ -2.28
UPK3AO75631 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.8□□□□□ -2.28
UPK3AO75631 RNU6-408P-201ENST00000515910 100 ntBASIC0.8□□□□□ -2.28
UPK3AO75631 RNU6-113P-201ENST00000516653 101 ntBASIC0.8□□□□□ -2.28
UPK3AO75631 AC023442.1-201ENST00000531247 422 ntBASIC0.8□□□□□ -2.28
UPK3AO75631 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.8□□□□□ -2.28
UPK3AO75631 AL669831.3-213ENST00000636676 183 ntBASIC0.8□□□□□ -2.28
UPK3AO75631 Y_RNA.243-201ENST00000364481 109 ntBASIC0.79□□□□□ -2.28
UPK3AO75631 Y_RNA.363-201ENST00000365529 113 ntBASIC0.79□□□□□ -2.28
UPK3AO75631 RNU6-926P-201ENST00000384075 107 ntBASIC0.79□□□□□ -2.28
UPK3AO75631 Z98949.2-201ENST00000440996 144 ntBASIC0.79□□□□□ -2.28
UPK3AO75631 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.79□□□□□ -2.28
UPK3AO75631 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.79□□□□□ -2.28
UPK3AO75631 MTND4P17-201ENST00000470444 350 ntBASIC0.79□□□□□ -2.28
UPK3AO75631 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.79□□□□□ -2.28
UPK3AO75631 ACA64.5-201ENST00000516207 127 ntBASIC0.79□□□□□ -2.28
UPK3AO75631 AC090142.3-201ENST00000519012 385 ntBASIC0.79□□□□□ -2.28
UPK3AO75631 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.79□□□□□ -2.28
UPK3AO75631 MIR4698-201ENST00000577795 80 ntBASIC0.79□□□□□ -2.28
UPK3AO75631 FAM106DP-201ENST00000586416 501 ntBASIC0.79□□□□□ -2.28
UPK3AO75631 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.79□□□□□ -2.28
UPK3AO75631 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
UPK3AO75631 SNORD68-201ENST00000363214 84 ntBASIC0.78□□□□□ -2.28
UPK3AO75631 RNU1-93P-201ENST00000364704 169 ntBASIC0.78□□□□□ -2.28
UPK3AO75631 RNU6-767P-201ENST00000384132 107 ntBASIC0.78□□□□□ -2.28
UPK3AO75631 RNU6-163P-201ENST00000384396 106 ntBASIC0.78□□□□□ -2.28
UPK3AO75631 MIR891A-201ENST00000401237 79 ntBASIC0.78□□□□□ -2.28
UPK3AO75631 RNA5SP511-201ENST00000410487 115 ntBASIC0.78□□□□□ -2.28
UPK3AO75631 PIGPP3-201ENST00000425307 415 ntBASIC0.78□□□□□ -2.28
UPK3AO75631 ELOCP24-201ENST00000456370 334 ntBASIC0.78□□□□□ -2.28
UPK3AO75631 LINC01399-202ENST00000458450 244 ntBASIC0.78□□□□□ -2.28
UPK3AO75631 SNORD124-201ENST00000459577 104 ntBASIC0.78□□□□□ -2.28
UPK3AO75631 RNU6-120P-201ENST00000516077 103 ntBASIC0.78□□□□□ -2.28
UPK3AO75631 SNORD111.1-201ENST00000516421 86 ntBASIC0.78□□□□□ -2.28
UPK3AO75631 AL358944.1-201ENST00000528537 144 ntBASIC0.78□□□□□ -2.28
UPK3AO75631 MIR3973-201ENST00000579824 107 ntBASIC0.78□□□□□ -2.28
UPK3AO75631 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.78□□□□□ -2.28
UPK3AO75631 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.78□□□□□ -2.28
UPK3AO75631 MIR526A1-201ENST00000384897 85 ntBASIC0.77□□□□□ -2.29
UPK3AO75631 MIR625-201ENST00000385047 85 ntBASIC0.77□□□□□ -2.29
UPK3AO75631 MIR942-201ENST00000401111 86 ntBASIC0.77□□□□□ -2.29
UPK3AO75631 RNU4-14P-201ENST00000410858 122 ntBASIC0.77□□□□□ -2.29
UPK3AO75631 AL354751.2-201ENST00000415471 210 ntBASIC0.77□□□□□ -2.29
UPK3AO75631 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.77□□□□□ -2.29
UPK3AO75631 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.77□□□□□ -2.29
UPK3AO75631 MIR2355-201ENST00000517199 87 ntBASIC0.77□□□□□ -2.29
UPK3AO75631 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.77□□□□□ -2.29
UPK3AO75631 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.77□□□□□ -2.29
UPK3AO75631 AC120024.3-201ENST00000603167 156 ntBASIC0.77□□□□□ -2.29
UPK3AO75631 MIR6857-201ENST00000613267 93 ntBASIC0.77□□□□□ -2.29
UPK3AO75631 AC004467.1-201ENST00000615678 330 ntBASIC0.77□□□□□ -2.29
UPK3AO75631 AC008163.1-202ENST00000636004 2889 ntBASIC0.77□□□□□ -2.29
UPK3AO75631 CASC19-280ENST00000642102 1351 ntBASIC0.76□□□□□ -2.29
UPK3AO75631 MIR373-201ENST00000362273 69 ntBASIC0.76□□□□□ -2.29
UPK3AO75631 RNU6-833P-201ENST00000363486 107 ntBASIC0.76□□□□□ -2.29
UPK3AO75631 Y_RNA.160-201ENST00000363677 92 ntBASIC0.76□□□□□ -2.29
UPK3AO75631 RNU6-961P-201ENST00000363893 105 ntBASIC0.76□□□□□ -2.29
UPK3AO75631 SNORD115-30-201ENST00000364117 82 ntBASIC0.76□□□□□ -2.29
UPK3AO75631 SNORA69.1-201ENST00000390904 137 ntBASIC0.76□□□□□ -2.29
UPK3AO75631 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.76□□□□□ -2.29
UPK3AO75631 MTND4P28-201ENST00000426217 387 ntBASIC0.76□□□□□ -2.29
UPK3AO75631 RPEP5-201ENST00000441137 268 ntBASIC0.76□□□□□ -2.29
UPK3AO75631 Y_RNA.635-201ENST00000459041 101 ntBASIC0.76□□□□□ -2.29
UPK3AO75631 CYCTP-201ENST00000504253 315 ntBASIC0.76□□□□□ -2.29
UPK3AO75631 PSMC1P5-201ENST00000512850 177 ntBASIC0.76□□□□□ -2.29
UPK3AO75631 RNU6-1337P-201ENST00000516525 95 ntBASIC0.76□□□□□ -2.29
UPK3AO75631 RNU6-1223P-201ENST00000517124 104 ntBASIC0.76□□□□□ -2.29
UPK3AO75631 RNU6-264P-201ENST00000517134 104 ntBASIC0.76□□□□□ -2.29
UPK3AO75631 RNU2-12P-201ENST00000517216 168 ntBASIC0.76□□□□□ -2.29
UPK3AO75631 AC055872.1-201ENST00000570978 278 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms