Protein–RNA interactions for Protein: O75626

PRDM1, PR domain zinc finger protein 1, humanhuman

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1O75626 CST2P1-201ENST00000425770 87 ntBASIC1.53□□□□□ -2.16
PRDM1O75626 RPEP5-201ENST00000441137 268 ntBASIC1.53□□□□□ -2.16
PRDM1O75626 AC068338.1-201ENST00000565567 176 ntBASIC1.53□□□□□ -2.16
PRDM1O75626 MIR3660-201ENST00000584845 100 ntBASIC1.53□□□□□ -2.16
PRDM1O75626 AC022432.1-201ENST00000595739 310 ntBASIC1.53□□□□□ -2.16
PRDM1O75626 AP001485.1-201ENST00000604799 199 ntBASIC1.53□□□□□ -2.16
PRDM1O75626 AC004467.1-201ENST00000615678 330 ntBASIC1.53□□□□□ -2.16
PRDM1O75626 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
PRDM1O75626 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
PRDM1O75626 RNU6-450P-201ENST00000364654 107 ntBASIC1.52□□□□□ -2.17
PRDM1O75626 SNORA4.2-201ENST00000365313 147 ntBASIC1.52□□□□□ -2.17
PRDM1O75626 Y_RNA.527-201ENST00000384573 102 ntBASIC1.52□□□□□ -2.17
PRDM1O75626 MIR515-2-201ENST00000384883 83 ntBASIC1.52□□□□□ -2.17
PRDM1O75626 MIR515-1-201ENST00000384884 83 ntBASIC1.52□□□□□ -2.17
PRDM1O75626 RNA5SP467-201ENST00000391274 118 ntBASIC1.52□□□□□ -2.17
PRDM1O75626 RNU6-985P-201ENST00000410182 104 ntBASIC1.52□□□□□ -2.17
PRDM1O75626 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.52□□□□□ -2.17
PRDM1O75626 RNA5SP445-201ENST00000515889 115 ntBASIC1.52□□□□□ -2.17
PRDM1O75626 Y_RNA.673-201ENST00000516306 88 ntBASIC1.52□□□□□ -2.17
PRDM1O75626 RNU6-970P-201ENST00000516312 107 ntBASIC1.52□□□□□ -2.17
PRDM1O75626 RNU6-764P-201ENST00000516396 105 ntBASIC1.52□□□□□ -2.17
PRDM1O75626 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.52□□□□□ -2.17
PRDM1O75626 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.52□□□□□ -2.17
PRDM1O75626 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.52□□□□□ -2.17
PRDM1O75626 AL355297.3-201ENST00000604082 446 ntBASIC1.52□□□□□ -2.17
PRDM1O75626 AL021879.1-201ENST00000611756 288 ntBASIC1.52□□□□□ -2.17
PRDM1O75626 ICE2P2-201ENST00000483823 2787 ntBASIC1.51□□□□□ -2.17
PRDM1O75626 RNU6-53P-201ENST00000365367 106 ntBASIC1.51□□□□□ -2.17
PRDM1O75626 SNORD63-201ENST00000384262 68 ntBASIC1.51□□□□□ -2.17
PRDM1O75626 RNU6-1160P-201ENST00000384546 104 ntBASIC1.51□□□□□ -2.17
PRDM1O75626 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.51□□□□□ -2.17
PRDM1O75626 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.51□□□□□ -2.17
PRDM1O75626 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.51□□□□□ -2.17
PRDM1O75626 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.51□□□□□ -2.17
PRDM1O75626 AC010598.1-201ENST00000510378 103 ntBASIC1.51□□□□□ -2.17
PRDM1O75626 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.51□□□□□ -2.17
PRDM1O75626 AC113195.1-201ENST00000579952 141 ntBASIC1.51□□□□□ -2.17
PRDM1O75626 MIR302D-201ENST00000362275 68 ntBASIC1.5□□□□□ -2.17
PRDM1O75626 Y_RNA.183-201ENST00000363882 113 ntBASIC1.5□□□□□ -2.17
PRDM1O75626 Y_RNA.287-201ENST00000364853 94 ntBASIC1.5□□□□□ -2.17
PRDM1O75626 MIR606-201ENST00000384851 96 ntBASIC1.5□□□□□ -2.17
PRDM1O75626 RNA5SP323-201ENST00000391094 133 ntBASIC1.5□□□□□ -2.17
PRDM1O75626 RNU2-54P-201ENST00000410299 190 ntBASIC1.5□□□□□ -2.17
PRDM1O75626 AC016909.1-201ENST00000415916 166 ntBASIC1.5□□□□□ -2.17
PRDM1O75626 AC005002.2-201ENST00000438228 269 ntBASIC1.5□□□□□ -2.17
PRDM1O75626 SNORD65B-201ENST00000459126 73 ntBASIC1.5□□□□□ -2.17
PRDM1O75626 snoU13.27-201ENST00000459278 104 ntBASIC1.5□□□□□ -2.17
PRDM1O75626 RNU6-1143P-201ENST00000516125 104 ntBASIC1.5□□□□□ -2.17
PRDM1O75626 SNORA40.15-201ENST00000516884 107 ntBASIC1.5□□□□□ -2.17
PRDM1O75626 RNU6-902P-201ENST00000517212 91 ntBASIC1.5□□□□□ -2.17
PRDM1O75626 AP002001.1-203ENST00000534002 267 ntBASIC1.5□□□□□ -2.17
PRDM1O75626 AL137100.2-201ENST00000555786 315 ntBASIC1.5□□□□□ -2.17
PRDM1O75626 MIR4423-201ENST00000580922 80 ntBASIC1.5□□□□□ -2.17
PRDM1O75626 U6.115-201ENST00000636045 103 ntBASIC1.5□□□□□ -2.17
PRDM1O75626 SNORD114-7-201ENST00000362520 77 ntBASIC1.49□□□□□ -2.17
PRDM1O75626 Y_RNA.143-201ENST00000363520 106 ntBASIC1.49□□□□□ -2.17
PRDM1O75626 RNU6-454P-201ENST00000364292 107 ntBASIC1.49□□□□□ -2.17
PRDM1O75626 Y_RNA.226-201ENST00000364337 114 ntBASIC1.49□□□□□ -2.17
PRDM1O75626 Y_RNA.243-201ENST00000364481 109 ntBASIC1.49□□□□□ -2.17
PRDM1O75626 Y_RNA.276-201ENST00000364732 109 ntBASIC1.49□□□□□ -2.17
PRDM1O75626 RNU6-1175P-201ENST00000365200 107 ntBASIC1.49□□□□□ -2.17
PRDM1O75626 Y_RNA.570-201ENST00000384750 101 ntBASIC1.49□□□□□ -2.17
PRDM1O75626 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.49□□□□□ -2.17
PRDM1O75626 MIR758-201ENST00000390227 88 ntBASIC1.49□□□□□ -2.17
PRDM1O75626 RNU6-955P-201ENST00000410497 104 ntBASIC1.49□□□□□ -2.17
PRDM1O75626 AC010154.1-201ENST00000425857 269 ntBASIC1.49□□□□□ -2.17
PRDM1O75626 AC005042.3-201ENST00000453230 174 ntBASIC1.49□□□□□ -2.17
PRDM1O75626 RNU6-1137P-201ENST00000517073 99 ntBASIC1.49□□□□□ -2.17
PRDM1O75626 AC019176.1-201ENST00000518519 225 ntBASIC1.49□□□□□ -2.17
PRDM1O75626 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.49□□□□□ -2.17
PRDM1O75626 AC131281.1-201ENST00000522984 164 ntBASIC1.49□□□□□ -2.17
PRDM1O75626 AC022441.3-201ENST00000605737 136 ntBASIC1.49□□□□□ -2.17
PRDM1O75626 AC011373.1-201ENST00000607270 237 ntBASIC1.49□□□□□ -2.17
PRDM1O75626 AC007742.2-201ENST00000618226 398 ntBASIC1.49□□□□□ -2.17
PRDM1O75626 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
PRDM1O75626 Y_RNA.145-201ENST00000363527 102 ntBASIC1.48□□□□□ -2.17
PRDM1O75626 SNORD1A-201ENST00000364968 72 ntBASIC1.48□□□□□ -2.17
PRDM1O75626 SNORA20B-201ENST00000384220 132 ntBASIC1.48□□□□□ -2.17
PRDM1O75626 RNU6-21P-201ENST00000384710 107 ntBASIC1.48□□□□□ -2.17
PRDM1O75626 RNU11-5P-201ENST00000391216 129 ntBASIC1.48□□□□□ -2.17
PRDM1O75626 RNU6-130P-201ENST00000411112 103 ntBASIC1.48□□□□□ -2.17
PRDM1O75626 COX6CP10-201ENST00000416832 224 ntBASIC1.48□□□□□ -2.17
PRDM1O75626 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.48□□□□□ -2.17
PRDM1O75626 SNORA70.12-201ENST00000516084 153 ntBASIC1.48□□□□□ -2.17
PRDM1O75626 RNU6-397P-201ENST00000516226 104 ntBASIC1.48□□□□□ -2.17
PRDM1O75626 RNU6-155P-201ENST00000516347 100 ntBASIC1.48□□□□□ -2.17
PRDM1O75626 RNU7-110P-201ENST00000516891 62 ntBASIC1.48□□□□□ -2.17
PRDM1O75626 RNU6-897P-201ENST00000517135 105 ntBASIC1.48□□□□□ -2.17
PRDM1O75626 RNU2-12P-201ENST00000517216 168 ntBASIC1.48□□□□□ -2.17
PRDM1O75626 AC024995.1-201ENST00000523014 93 ntBASIC1.48□□□□□ -2.17
PRDM1O75626 RAC1P9-201ENST00000604990 392 ntBASIC1.48□□□□□ -2.17
PRDM1O75626 AC005828.6-201ENST00000606610 232 ntBASIC1.48□□□□□ -2.17
PRDM1O75626 PART1_1.1-201ENST00000611761 217 ntBASIC1.48□□□□□ -2.17
PRDM1O75626 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
PRDM1O75626 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
PRDM1O75626 Y_RNA.101-201ENST00000363154 102 ntBASIC1.47□□□□□ -2.17
PRDM1O75626 RNU6-392P-201ENST00000364926 101 ntBASIC1.47□□□□□ -2.17
PRDM1O75626 Y_RNA.446-201ENST00000384178 104 ntBASIC1.47□□□□□ -2.17
PRDM1O75626 RNU6-937P-201ENST00000384325 106 ntBASIC1.47□□□□□ -2.17
PRDM1O75626 RNA5SP109-201ENST00000391010 116 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms