Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.63□□□□□ -2.51
USH2AO75445 MTND1P11-201ENST00000456661 876 ntBASIC-0.63□□□□□ -2.51
USH2AO75445 AL390123.1-201ENST00000603216 237 ntBASIC-0.63□□□□□ -2.51
USH2AO75445 MIR6854-201ENST00000614935 69 ntBASIC-0.63□□□□□ -2.51
USH2AO75445 AC006213.4-201ENST00000616184 634 ntBASIC-0.63□□□□□ -2.51
USH2AO75445 RNU6-653P-201ENST00000363074 106 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.64□□□□□ -2.51
USH2AO75445 Y_RNA.597-201ENST00000410463 100 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 RNU2-8P-201ENST00000410727 190 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 AL929325.1-201ENST00000603096 117 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 AC007684.1-201ENST00000609671 477 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 AC022306.2-201ENST00000617563 647 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 MIR8054-201ENST00000620877 86 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 RNU6-532P-201ENST00000384318 107 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 RNU6-469P-201ENST00000516253 101 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 MIR548A2-201ENST00000384956 97 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 AC008521.1-201ENST00000587471 187 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 AC253576.2-201ENST00000618815 580 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 SNORD115-23-201ENST00000364461 82 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 RNU6-336P-201ENST00000364891 107 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.64□□□□□ -2.51
USH2AO75445 RNU6-730P-201ENST00000383954 104 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 RNU6-535P-201ENST00000384722 107 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 MIR215-201ENST00000384858 110 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 SNORA74.3-201ENST00000517108 154 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 MTCO3P15-201ENST00000526563 574 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 LRRC6P1-201ENST00000532188 885 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 OR4H6P-202ENST00000603819 340 ntBASIC-0.64□□□□□ -2.51
USH2AO75445 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.65□□□□□ -2.51
USH2AO75445 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 AC015818.7-201ENST00000428754 109 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 RPL23AP30-201ENST00000432419 501 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 AC087499.7-201ENST00000441958 109 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.65□□□□□ -2.51
USH2AO75445 MED28P2-201ENST00000475771 317 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 RNU6-390P-201ENST00000516259 103 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.65□□□□□ -2.51
USH2AO75445 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 RNU6-694P-201ENST00000364071 147 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.65□□□□□ -2.51
USH2AO75445 MTND3P17-201ENST00000416968 344 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 GPM6BP2-201ENST00000432046 144 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 GPM6BP1-201ENST00000446387 144 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 AL589826.1-201ENST00000340697 249 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 MIR340-201ENST00000362125 95 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 RNU6-212P-201ENST00000362642 104 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 SNORD114-29-201ENST00000364819 70 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 SNORA26.5-201ENST00000391215 123 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 MIR891A-201ENST00000401237 79 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 AL109755.1-201ENST00000401791 649 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 MCFD2P1-201ENST00000417812 300 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 AL138752.1-201ENST00000452964 351 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 AC009646.1-201ENST00000510455 318 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 VN1R83P-201ENST00000595685 445 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 RPL17P51-201ENST00000605218 238 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 AL136370.1-201ENST00000608166 691 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 MTND4P21-201ENST00000453886 1357 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 U8.17-201ENST00000391292 132 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.65□□□□□ -2.51
USH2AO75445 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-0.65□□□□□ -2.51
USH2AO75445 snoU13.14-201ENST00000459372 104 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 SNORA25.17-201ENST00000517184 124 ntBASIC-0.65□□□□□ -2.51
USH2AO75445 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.65□□□□□ -2.51
USH2AO75445 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC-0.65□□□□□ -2.51
USH2AO75445 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-0.65□□□□□ -2.51
USH2AO75445 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.66□□□□□ -2.51
USH2AO75445 RNU6-690P-201ENST00000365242 106 ntBASIC-0.66□□□□□ -2.51
USH2AO75445 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.66□□□□□ -2.51
USH2AO75445 MT-TN-201ENST00000387400 73 ntBASIC-0.66□□□□□ -2.51
USH2AO75445 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.66□□□□□ -2.51
USH2AO75445 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-0.66□□□□□ -2.51
USH2AO75445 AL353752.1-201ENST00000454946 260 ntBASIC-0.66□□□□□ -2.51
USH2AO75445 RNU7-62P-201ENST00000458856 62 ntBASIC-0.66□□□□□ -2.51
USH2AO75445 AC104576.1-201ENST00000524225 88 ntBASIC-0.66□□□□□ -2.51
USH2AO75445 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.66□□□□□ -2.51
USH2AO75445 AC073869.9-201ENST00000641610 120 ntBASIC-0.66□□□□□ -2.51
USH2AO75445 SNORA24-201ENST00000384096 131 ntBASIC-0.66□□□□□ -2.51
USH2AO75445 MIR526A1-201ENST00000384897 85 ntBASIC-0.66□□□□□ -2.51
USH2AO75445 RPS24P1-201ENST00000438550 371 ntBASIC-0.66□□□□□ -2.51
USH2AO75445 U8.19-201ENST00000459095 133 ntBASIC-0.66□□□□□ -2.51
USH2AO75445 AC091951.2-201ENST00000500762 203 ntBASIC-0.66□□□□□ -2.51
USH2AO75445 AC034229.4-201ENST00000607861 441 ntBASIC-0.66□□□□□ -2.51
USH2AO75445 AC068135.1-201ENST00000446164 246 ntBASIC-0.66□□□□□ -2.52
USH2AO75445 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.66□□□□□ -2.52
USH2AO75445 RNA5SP290-201ENST00000517133 127 ntBASIC-0.66□□□□□ -2.52
USH2AO75445 RNA5SP47-201ENST00000517230 109 ntBASIC-0.66□□□□□ -2.52
USH2AO75445 SNORA40.17-201ENST00000517256 115 ntBASIC-0.66□□□□□ -2.52
USH2AO75445 AC018889.1-201ENST00000605372 397 ntBASIC-0.66□□□□□ -2.52
USH2AO75445 AC108747.1-201ENST00000609508 535 ntBASIC-0.66□□□□□ -2.52
USH2AO75445 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-0.66□□□□□ -2.52
USH2AO75445 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.66□□□□□ -2.52
USH2AO75445 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-0.66□□□□□ -2.52
USH2AO75445 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms