Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL596028.1-201ENST00000326971 197 ntBASIC1.82□□□□□ -2.12
ZIC3O60481 RNU6-1019P-201ENST00000364424 107 ntBASIC1.82□□□□□ -2.12
ZIC3O60481 Y_RNA.416-201ENST00000384014 113 ntBASIC1.82□□□□□ -2.12
ZIC3O60481 RNU6-662P-201ENST00000384253 104 ntBASIC1.82□□□□□ -2.12
ZIC3O60481 SNORA8-201ENST00000384574 139 ntBASIC1.82□□□□□ -2.12
ZIC3O60481 MT-TG-201ENST00000387429 68 ntBASIC1.82□□□□□ -2.12
ZIC3O60481 MIR548H3-201ENST00000408771 118 ntBASIC1.82□□□□□ -2.12
ZIC3O60481 AL162725.1-201ENST00000435405 301 ntBASIC1.82□□□□□ -2.12
ZIC3O60481 MIR5089-201ENST00000580047 84 ntBASIC1.82□□□□□ -2.12
ZIC3O60481 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.82□□□□□ -2.12
ZIC3O60481 ZNF355P-201ENST00000427301 3216 ntBASIC1.82□□□□□ -2.12
ZIC3O60481 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
ZIC3O60481 RNU6-1272P-201ENST00000362776 107 ntBASIC1.81□□□□□ -2.12
ZIC3O60481 RNU6-740P-201ENST00000364734 105 ntBASIC1.81□□□□□ -2.12
ZIC3O60481 RNA5SP160-201ENST00000364866 120 ntBASIC1.81□□□□□ -2.12
ZIC3O60481 RNA5SP323-201ENST00000391094 133 ntBASIC1.81□□□□□ -2.12
ZIC3O60481 SNORA26.5-201ENST00000391215 123 ntBASIC1.81□□□□□ -2.12
ZIC3O60481 Y_RNA.618-201ENST00000410949 107 ntBASIC1.81□□□□□ -2.12
ZIC3O60481 RNU2-14P-201ENST00000411053 191 ntBASIC1.81□□□□□ -2.12
ZIC3O60481 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.81□□□□□ -2.12
ZIC3O60481 Y_RNA.637-201ENST00000459424 114 ntBASIC1.81□□□□□ -2.12
ZIC3O60481 snoU13.26-201ENST00000459452 105 ntBASIC1.81□□□□□ -2.12
ZIC3O60481 MIR3128-201ENST00000581957 66 ntBASIC1.81□□□□□ -2.12
ZIC3O60481 AL078604.3-201ENST00000615580 211 ntBASIC1.81□□□□□ -2.12
ZIC3O60481 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.81□□□□□ -2.12
ZIC3O60481 RNU6-112P-201ENST00000363599 104 ntBASIC1.8□□□□□ -2.12
ZIC3O60481 Y_RNA.277-201ENST00000364754 102 ntBASIC1.8□□□□□ -2.12
ZIC3O60481 SNORA72.4-201ENST00000384174 132 ntBASIC1.8□□□□□ -2.12
ZIC3O60481 Y_RNA.478-201ENST00000384358 107 ntBASIC1.8□□□□□ -2.12
ZIC3O60481 RNU6-136P-201ENST00000384663 107 ntBASIC1.8□□□□□ -2.12
ZIC3O60481 RNU6-376P-201ENST00000384731 106 ntBASIC1.8□□□□□ -2.12
ZIC3O60481 RNU6-763P-201ENST00000390865 106 ntBASIC1.8□□□□□ -2.12
ZIC3O60481 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.8□□□□□ -2.12
ZIC3O60481 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.8□□□□□ -2.12
ZIC3O60481 RPS27P1-201ENST00000450552 247 ntBASIC1.8□□□□□ -2.12
ZIC3O60481 AL021397.1-201ENST00000451806 248 ntBASIC1.8□□□□□ -2.12
ZIC3O60481 AC025033.1-201ENST00000463883 194 ntBASIC1.8□□□□□ -2.12
ZIC3O60481 RPS27P21-201ENST00000486977 252 ntBASIC1.8□□□□□ -2.12
ZIC3O60481 MIR4643-201ENST00000577473 78 ntBASIC1.8□□□□□ -2.12
ZIC3O60481 AC091178.2-201ENST00000584401 117 ntBASIC1.8□□□□□ -2.12
ZIC3O60481 AC005972.2-201ENST00000604690 348 ntBASIC1.8□□□□□ -2.12
ZIC3O60481 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
ZIC3O60481 AC018630.2-201ENST00000534866 2403 ntBASIC1.8□□□□□ -2.12
ZIC3O60481 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
ZIC3O60481 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
ZIC3O60481 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
ZIC3O60481 ZNF702P-202ENST00000434269 1966 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
ZIC3O60481 Y_RNA.20-201ENST00000362479 113 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 Y_RNA.117-201ENST00000363294 101 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 RNU6-1048P-201ENST00000364054 107 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 SNORA63D-201ENST00000364359 132 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 RNA5SP37-201ENST00000365420 130 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 RNU6-1323P-201ENST00000384025 107 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 Y_RNA.477-201ENST00000384352 108 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 RNU6-1289P-201ENST00000384431 106 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 RNU6-296P-201ENST00000384608 107 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 Y_RNA.539-201ENST00000384635 107 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 SNORD58.1-201ENST00000391313 66 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 RNA5SP100-201ENST00000410903 110 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 RNA5SP59-201ENST00000410922 110 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 AC104332.1-201ENST00000440471 797 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 AC091021.1-201ENST00000468051 388 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 AC090255.1-201ENST00000495779 349 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.79□□□□□ -2.12
ZIC3O60481 RNU6-1023P-201ENST00000516137 106 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 Y_RNA.673-201ENST00000516306 88 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 MIR514B-201ENST00000516774 80 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 AC006006.1-201ENST00000603082 144 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 SNRPGP19-201ENST00000603826 189 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 AC022217.4-201ENST00000604389 163 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 snoU18.1-201ENST00000629629 71 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 MIR6079-201ENST00000635807 62 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 AC068647.2-201ENST00000637380 353 ntBASIC1.79□□□□□ -2.12
ZIC3O60481 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.79□□□□□ -2.12
ZIC3O60481 RNA5SP276-201ENST00000362580 94 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 Y_RNA.60-201ENST00000362831 98 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 Y_RNA.82-201ENST00000363000 102 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 Y_RNA.92-201ENST00000363043 102 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 Y_RNA.188-201ENST00000363952 111 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 Y_RNA.235-201ENST00000364412 102 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 U8.7-201ENST00000364940 136 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 Y_RNA.306-201ENST00000365015 102 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 Y_RNA.312-201ENST00000365089 102 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 Y_RNA.322-201ENST00000365151 102 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 MIR17-201ENST00000385012 84 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 RNU6-651P-201ENST00000411040 105 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 AL606517.2-201ENST00000442855 241 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 RPS4XP11-201ENST00000446897 772 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.78□□□□□ -2.12
ZIC3O60481 SNORD2.1-201ENST00000458762 69 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 Y_RNA.650-201ENST00000459002 102 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 U8.19-201ENST00000459095 133 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 RNU7-141P-201ENST00000459304 62 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 RNU1-40P-201ENST00000516816 164 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 RNU1-97P-201ENST00000516872 164 ntBASIC1.78□□□□□ -2.12
ZIC3O60481 Y_RNA.777-201ENST00000516982 102 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms