Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 MTCO2P33-201ENST00000402100 465 ntBASIC-0.28□□□□□ -2.45
SSNA1O43805 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.28□□□□□ -2.45
SSNA1O43805 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.28□□□□□ -2.45
SSNA1O43805 MTND3P16-201ENST00000452205 344 ntBASIC-0.28□□□□□ -2.45
SSNA1O43805 MTND2P39-201ENST00000457230 764 ntBASIC-0.28□□□□□ -2.45
SSNA1O43805 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.28□□□□□ -2.45
SSNA1O43805 AC090897.1-201ENST00000580909 226 ntBASIC-0.28□□□□□ -2.45
SSNA1O43805 AC008608.1-201ENST00000603910 127 ntBASIC-0.28□□□□□ -2.45
SSNA1O43805 AC098679.4-201ENST00000624241 654 ntBASIC-0.28□□□□□ -2.45
SSNA1O43805 MIR371B-201ENST00000638082 66 ntBASIC-0.28□□□□□ -2.45
SSNA1O43805 MIR410-201ENST00000362222 80 ntBASIC-0.29□□□□□ -2.46
SSNA1O43805 SNORD114-7-201ENST00000362520 77 ntBASIC-0.29□□□□□ -2.46
SSNA1O43805 RNU6-254P-201ENST00000363377 107 ntBASIC-0.29□□□□□ -2.46
SSNA1O43805 RNU6-522P-201ENST00000364497 107 ntBASIC-0.29□□□□□ -2.46
SSNA1O43805 SNORA32.1-201ENST00000364514 115 ntBASIC-0.29□□□□□ -2.46
SSNA1O43805 SNORA72.3-201ENST00000365074 132 ntBASIC-0.29□□□□□ -2.46
SSNA1O43805 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.29□□□□□ -2.46
SSNA1O43805 RNU6-125P-201ENST00000384505 107 ntBASIC-0.29□□□□□ -2.46
SSNA1O43805 MIR938-201ENST00000401216 83 ntBASIC-0.29□□□□□ -2.46
SSNA1O43805 RNU2-59P-201ENST00000410482 191 ntBASIC-0.29□□□□□ -2.46
SSNA1O43805 BTF3P11-201ENST00000426582 477 ntBASIC-0.29□□□□□ -2.46
SSNA1O43805 SNRPGP10-201ENST00000432323 225 ntBASIC-0.29□□□□□ -2.46
SSNA1O43805 MTATP6P13-201ENST00000438531 667 ntBASIC-0.29□□□□□ -2.46
SSNA1O43805 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.29□□□□□ -2.46
SSNA1O43805 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.29□□□□□ -2.46
SSNA1O43805 AP003327.1-201ENST00000529684 127 ntBASIC-0.29□□□□□ -2.46
SSNA1O43805 MIR3678-201ENST00000578455 94 ntBASIC-0.29□□□□□ -2.46
SSNA1O43805 AC245884.10-201ENST00000597355 337 ntBASIC-0.29□□□□□ -2.46
SSNA1O43805 Z94722.1-201ENST00000604328 474 ntBASIC-0.29□□□□□ -2.46
SSNA1O43805 SNORA51.10-201ENST00000384418 136 ntBASIC-0.3□□□□□ -2.46
SSNA1O43805 RNU6-131P-201ENST00000391144 107 ntBASIC-0.3□□□□□ -2.46
SSNA1O43805 RNA5SP496-201ENST00000391240 109 ntBASIC-0.3□□□□□ -2.46
SSNA1O43805 PCNPP3-201ENST00000393579 471 ntBASIC-0.3□□□□□ -2.46
SSNA1O43805 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.3□□□□□ -2.46
SSNA1O43805 RNU6-1132P-201ENST00000459214 107 ntBASIC-0.3□□□□□ -2.46
SSNA1O43805 RNU4-77P-201ENST00000516692 156 ntBASIC-0.3□□□□□ -2.46
SSNA1O43805 AC018448.1-201ENST00000552843 316 ntBASIC-0.3□□□□□ -2.46
SSNA1O43805 MIR4514-201ENST00000581410 57 ntBASIC-0.3□□□□□ -2.46
SSNA1O43805 MIR4264-201ENST00000583520 66 ntBASIC-0.3□□□□□ -2.46
SSNA1O43805 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.3□□□□□ -2.46
SSNA1O43805 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.31□□□□□ -2.46
SSNA1O43805 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC-0.31□□□□□ -2.46
SSNA1O43805 MIR337-201ENST00000362281 93 ntBASIC-0.31□□□□□ -2.46
SSNA1O43805 SNORA36.1-201ENST00000363424 132 ntBASIC-0.31□□□□□ -2.46
SSNA1O43805 SNORD114-26-201ENST00000363543 72 ntBASIC-0.31□□□□□ -2.46
SSNA1O43805 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.31□□□□□ -2.46
SSNA1O43805 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC-0.31□□□□□ -2.46
SSNA1O43805 MIR1276-201ENST00000408707 83 ntBASIC-0.31□□□□□ -2.46
SSNA1O43805 MTCO2P27-201ENST00000420740 428 ntBASIC-0.31□□□□□ -2.46
SSNA1O43805 AL365203.2-201ENST00000423444 196 ntBASIC-0.31□□□□□ -2.46
SSNA1O43805 USMG5P1-201ENST00000425964 177 ntBASIC-0.31□□□□□ -2.46
SSNA1O43805 AC092447.3-201ENST00000426027 686 ntBASIC-0.31□□□□□ -2.46
SSNA1O43805 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.31□□□□□ -2.46
SSNA1O43805 MIR6755-201ENST00000619993 66 ntBASIC-0.31□□□□□ -2.46
SSNA1O43805 AC097520.1-201ENST00000624435 385 ntBASIC-0.31□□□□□ -2.46
SSNA1O43805 MTND1P7-201ENST00000632801 297 ntBASIC-0.31□□□□□ -2.46
SSNA1O43805 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.32□□□□□ -2.46
SSNA1O43805 Y_RNA.191-201ENST00000363972 113 ntBASIC-0.32□□□□□ -2.46
SSNA1O43805 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.32□□□□□ -2.46
SSNA1O43805 RNU6-42P-201ENST00000384165 107 ntBASIC-0.32□□□□□ -2.46
SSNA1O43805 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.32□□□□□ -2.46
SSNA1O43805 MIR610-201ENST00000385139 96 ntBASIC-0.32□□□□□ -2.46
SSNA1O43805 RNU6-261P-201ENST00000459506 102 ntBASIC-0.32□□□□□ -2.46
SSNA1O43805 AC116353.2-201ENST00000505332 712 ntBASIC-0.32□□□□□ -2.46
SSNA1O43805 AC133485.4-201ENST00000561835 220 ntBASIC-0.32□□□□□ -2.46
SSNA1O43805 AC090617.3-201ENST00000573670 475 ntBASIC-0.32□□□□□ -2.46
SSNA1O43805 MIR4528-201ENST00000577763 90 ntBASIC-0.32□□□□□ -2.46
SSNA1O43805 AC092954.2-201ENST00000609103 430 ntBASIC-0.32□□□□□ -2.46
SSNA1O43805 uc_338.6-201ENST00000613544 171 ntBASIC-0.32□□□□□ -2.46
SSNA1O43805 AC090517.2-201ENST00000614966 680 ntBASIC-0.32□□□□□ -2.46
SSNA1O43805 MIR3674-201ENST00000636576 68 ntBASIC-0.32□□□□□ -2.46
SSNA1O43805 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
SSNA1O43805 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.33□□□□□ -2.46
SSNA1O43805 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.33□□□□□ -2.46
SSNA1O43805 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.33□□□□□ -2.46
SSNA1O43805 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.33□□□□□ -2.46
SSNA1O43805 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.33□□□□□ -2.46
SSNA1O43805 SNORA69-201ENST00000383895 132 ntBASIC-0.33□□□□□ -2.46
SSNA1O43805 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.33□□□□□ -2.46
SSNA1O43805 EIF1P2-201ENST00000428233 350 ntBASIC-0.33□□□□□ -2.46
SSNA1O43805 RNU7-102P-201ENST00000458948 62 ntBASIC-0.33□□□□□ -2.46
SSNA1O43805 RPL23AP54-201ENST00000495129 419 ntBASIC-0.33□□□□□ -2.46
SSNA1O43805 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.33□□□□□ -2.46
SSNA1O43805 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.33□□□□□ -2.46
SSNA1O43805 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.33□□□□□ -2.46
SSNA1O43805 AC141557.1-201ENST00000540982 400 ntBASIC-0.33□□□□□ -2.46
SSNA1O43805 MTATP6P24-201ENST00000576835 677 ntBASIC-0.33□□□□□ -2.46
SSNA1O43805 AC010525.2-201ENST00000590920 195 ntBASIC-0.33□□□□□ -2.46
SSNA1O43805 AC019193.3-201ENST00000609144 554 ntBASIC-0.33□□□□□ -2.46
SSNA1O43805 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.34□□□□□ -2.46
SSNA1O43805 MIR145-201ENST00000384967 88 ntBASIC-0.34□□□□□ -2.46
SSNA1O43805 MIR643-201ENST00000385267 97 ntBASIC-0.34□□□□□ -2.46
SSNA1O43805 RNU6-127P-201ENST00000390897 107 ntBASIC-0.34□□□□□ -2.46
SSNA1O43805 RNA5SP475-201ENST00000410568 110 ntBASIC-0.34□□□□□ -2.46
SSNA1O43805 RNU7-62P-201ENST00000458856 62 ntBASIC-0.34□□□□□ -2.46
SSNA1O43805 RNU6-625P-201ENST00000459412 107 ntBASIC-0.34□□□□□ -2.46
SSNA1O43805 AC083798.1-201ENST00000472671 131 ntBASIC-0.34□□□□□ -2.46
SSNA1O43805 HMGN1P10-201ENST00000474557 553 ntBASIC-0.34□□□□□ -2.46
SSNA1O43805 RNU6-1053P-201ENST00000515930 101 ntBASIC-0.34□□□□□ -2.46
SSNA1O43805 AC124303.1-201ENST00000605703 360 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms