Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 RN7SKP51-201ENST00000410781 304 ntBASIC1.7□□□□□ -2.14
NPHP1O15259 RPL30P13-201ENST00000418873 348 ntBASIC1.7□□□□□ -2.14
NPHP1O15259 RPS29P23-201ENST00000458635 123 ntBASIC1.7□□□□□ -2.14
NPHP1O15259 RPL39P38-201ENST00000467018 153 ntBASIC1.7□□□□□ -2.14
NPHP1O15259 AP002004.2-201ENST00000531656 154 ntBASIC1.7□□□□□ -2.14
NPHP1O15259 RAB11AP2-201ENST00000545905 639 ntBASIC1.7□□□□□ -2.14
NPHP1O15259 CYP3A52P-201ENST00000563326 91 ntBASIC1.7□□□□□ -2.14
NPHP1O15259 AC112487.2-201ENST00000637950 304 ntBASIC1.7□□□□□ -2.14
NPHP1O15259 AL161722.3-201ENST00000605789 2983 ntBASIC1.69□□□□□ -2.14
NPHP1O15259 Y_RNA.265-201ENST00000364677 108 ntBASIC1.69□□□□□ -2.14
NPHP1O15259 Y_RNA.463-201ENST00000384271 102 ntBASIC1.69□□□□□ -2.14
NPHP1O15259 RNU6-505P-201ENST00000384427 107 ntBASIC1.69□□□□□ -2.14
NPHP1O15259 MIR628-201ENST00000385229 95 ntBASIC1.69□□□□□ -2.14
NPHP1O15259 MTCO2P27-201ENST00000420740 428 ntBASIC1.69□□□□□ -2.14
NPHP1O15259 AC096644.2-201ENST00000429278 159 ntBASIC1.69□□□□□ -2.14
NPHP1O15259 CHEK2P4-201ENST00000450340 246 ntBASIC1.69□□□□□ -2.14
NPHP1O15259 SNORD19B-201ENST00000459623 84 ntBASIC1.69□□□□□ -2.14
NPHP1O15259 AC092991.1-201ENST00000477176 376 ntBASIC1.69□□□□□ -2.14
NPHP1O15259 OR9P1P-201ENST00000496431 281 ntBASIC1.69□□□□□ -2.14
NPHP1O15259 RNU6-1291P-201ENST00000516591 104 ntBASIC1.69□□□□□ -2.14
NPHP1O15259 RNU7-28P-201ENST00000516759 62 ntBASIC1.69□□□□□ -2.14
NPHP1O15259 AC093027.1-201ENST00000546698 429 ntBASIC1.69□□□□□ -2.14
NPHP1O15259 MIR3664-201ENST00000579074 99 ntBASIC1.69□□□□□ -2.14
NPHP1O15259 LARP7P1-201ENST00000605576 316 ntBASIC1.69□□□□□ -2.14
NPHP1O15259 AC240442.1-201ENST00000616055 283 ntBASIC1.69□□□□□ -2.14
NPHP1O15259 Y_RNA.101-201ENST00000363154 102 ntBASIC1.68□□□□□ -2.14
NPHP1O15259 Y_RNA.187-201ENST00000363918 113 ntBASIC1.68□□□□□ -2.14
NPHP1O15259 RNU6-424P-201ENST00000384367 105 ntBASIC1.68□□□□□ -2.14
NPHP1O15259 MIR520G-201ENST00000385064 90 ntBASIC1.68□□□□□ -2.14
NPHP1O15259 MIR320A-201ENST00000385302 82 ntBASIC1.68□□□□□ -2.14
NPHP1O15259 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.68□□□□□ -2.14
NPHP1O15259 RNA5SP168-201ENST00000516642 112 ntBASIC1.68□□□□□ -2.14
NPHP1O15259 RNU6-63P-201ENST00000516690 95 ntBASIC1.68□□□□□ -2.14
NPHP1O15259 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.68□□□□□ -2.14
NPHP1O15259 RNU6-1115P-201ENST00000362490 106 ntBASIC1.67□□□□□ -2.14
NPHP1O15259 Y_RNA.27-201ENST00000362540 103 ntBASIC1.67□□□□□ -2.14
NPHP1O15259 RNU6-708P-201ENST00000384217 107 ntBASIC1.67□□□□□ -2.14
NPHP1O15259 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
NPHP1O15259 RNU2-54P-201ENST00000410299 190 ntBASIC1.67□□□□□ -2.14
NPHP1O15259 MTND4LP11-201ENST00000422184 280 ntBASIC1.67□□□□□ -2.14
NPHP1O15259 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.67□□□□□ -2.14
NPHP1O15259 CALM2P4-201ENST00000430810 426 ntBASIC1.67□□□□□ -2.14
NPHP1O15259 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.67□□□□□ -2.14
NPHP1O15259 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.67□□□□□ -2.14
NPHP1O15259 COX6CP14-201ENST00000469580 174 ntBASIC1.67□□□□□ -2.14
NPHP1O15259 MTND3P22-201ENST00000510932 243 ntBASIC1.67□□□□□ -2.14
NPHP1O15259 AL160236.1-201ENST00000556317 195 ntBASIC1.67□□□□□ -2.14
NPHP1O15259 MIR4659A-201ENST00000580269 81 ntBASIC1.67□□□□□ -2.14
NPHP1O15259 VN1R91P-201ENST00000594377 169 ntBASIC1.67□□□□□ -2.14
NPHP1O15259 AC005176.2-201ENST00000596933 147 ntBASIC1.67□□□□□ -2.14
NPHP1O15259 AC006380.1-201ENST00000603598 186 ntBASIC1.67□□□□□ -2.14
NPHP1O15259 Y_RNA.804-201ENST00000615262 101 ntBASIC1.67□□□□□ -2.14
NPHP1O15259 AC011476.5-201ENST00000615594 130 ntBASIC1.67□□□□□ -2.14
NPHP1O15259 RMST_2.1-201ENST00000617263 136 ntBASIC1.67□□□□□ -2.14
NPHP1O15259 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
NPHP1O15259 RNU4-76P-201ENST00000364509 141 ntBASIC1.66□□□□□ -2.14
NPHP1O15259 RNU6-20P-201ENST00000384106 107 ntBASIC1.66□□□□□ -2.14
NPHP1O15259 U8.16-201ENST00000391279 133 ntBASIC1.66□□□□□ -2.14
NPHP1O15259 AL031003.1-201ENST00000404229 172 ntBASIC1.66□□□□□ -2.14
NPHP1O15259 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.66□□□□□ -2.14
NPHP1O15259 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.66□□□□□ -2.14
NPHP1O15259 SDAD1P3-201ENST00000427380 333 ntBASIC1.66□□□□□ -2.14
NPHP1O15259 MIR4778-201ENST00000577635 80 ntBASIC1.66□□□□□ -2.14
NPHP1O15259 AC106754.2-201ENST00000623006 233 ntBASIC1.66□□□□□ -2.14
NPHP1O15259 MIR4272-201ENST00000635924 64 ntBASIC1.66□□□□□ -2.14
NPHP1O15259 U6.92-201ENST00000636464 89 ntBASIC1.66□□□□□ -2.14
NPHP1O15259 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
NPHP1O15259 MIR26B-201ENST00000362251 77 ntBASIC1.65□□□□□ -2.15
NPHP1O15259 Y_RNA.58-201ENST00000362807 102 ntBASIC1.65□□□□□ -2.15
NPHP1O15259 RNU4-73P-201ENST00000363164 141 ntBASIC1.65□□□□□ -2.15
NPHP1O15259 RNU6-626P-201ENST00000363354 107 ntBASIC1.65□□□□□ -2.15
NPHP1O15259 Y_RNA.154-201ENST00000363624 102 ntBASIC1.65□□□□□ -2.15
NPHP1O15259 SNORD114-27-201ENST00000363766 70 ntBASIC1.65□□□□□ -2.15
NPHP1O15259 RNY3P1-201ENST00000365085 102 ntBASIC1.65□□□□□ -2.15
NPHP1O15259 RNY3-201ENST00000365484 102 ntBASIC1.65□□□□□ -2.15
NPHP1O15259 Y_RNA.428-201ENST00000384078 102 ntBASIC1.65□□□□□ -2.15
NPHP1O15259 RNA5SP482-201ENST00000391269 118 ntBASIC1.65□□□□□ -2.15
NPHP1O15259 AF228730.4-201ENST00000421457 183 ntBASIC1.65□□□□□ -2.15
NPHP1O15259 HSPE1P13-201ENST00000451143 297 ntBASIC1.65□□□□□ -2.15
NPHP1O15259 SNORA70.12-201ENST00000516084 153 ntBASIC1.65□□□□□ -2.15
NPHP1O15259 RNU6-1337P-201ENST00000516525 95 ntBASIC1.65□□□□□ -2.15
NPHP1O15259 RN7SKP88-201ENST00000516847 250 ntBASIC1.65□□□□□ -2.15
NPHP1O15259 RNU6-1096P-201ENST00000517089 102 ntBASIC1.65□□□□□ -2.15
NPHP1O15259 AC006600.1-201ENST00000572529 153 ntBASIC1.65□□□□□ -2.15
NPHP1O15259 7SK.8-201ENST00000612110 250 ntBASIC1.65□□□□□ -2.15
NPHP1O15259 7SK.11-201ENST00000615477 250 ntBASIC1.65□□□□□ -2.15
NPHP1O15259 7SK.13-201ENST00000622040 250 ntBASIC1.65□□□□□ -2.15
NPHP1O15259 AC091925.1-201ENST00000623204 462 ntBASIC1.65□□□□□ -2.15
NPHP1O15259 AC005592.1-201ENST00000566527 1640 ntBASIC1.65□□□□□ -2.15
NPHP1O15259 RNU6-136P-201ENST00000384663 107 ntBASIC1.64□□□□□ -2.15
NPHP1O15259 MT-TD-201ENST00000387419 68 ntBASIC1.64□□□□□ -2.15
NPHP1O15259 RNU6-1199P-201ENST00000411249 104 ntBASIC1.64□□□□□ -2.15
NPHP1O15259 AC236972.2-201ENST00000434979 310 ntBASIC1.64□□□□□ -2.15
NPHP1O15259 AC004223.1-201ENST00000479840 271 ntBASIC1.64□□□□□ -2.15
NPHP1O15259 RNA5SP61-201ENST00000516453 100 ntBASIC1.64□□□□□ -2.15
NPHP1O15259 RNU6-165P-201ENST00000517170 99 ntBASIC1.64□□□□□ -2.15
NPHP1O15259 SNORD116.3-201ENST00000517176 78 ntBASIC1.64□□□□□ -2.15
NPHP1O15259 AL358944.1-201ENST00000528537 144 ntBASIC1.64□□□□□ -2.15
NPHP1O15259 Y_RNA.146-201ENST00000363549 102 ntBASIC1.63□□□□□ -2.15
NPHP1O15259 Y_RNA.496-201ENST00000384444 101 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms