Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 MTCYBP4-201ENST00000401524 249 ntBASIC0.23□□□□□ -2.37
UBFD1O14562 RNA5SP95-201ENST00000410319 137 ntBASIC0.23□□□□□ -2.37
UBFD1O14562 RNU6-1304P-201ENST00000411374 106 ntBASIC0.23□□□□□ -2.37
UBFD1O14562 AL390729.2-201ENST00000416137 156 ntBASIC0.23□□□□□ -2.37
UBFD1O14562 AC092447.3-201ENST00000426027 686 ntBASIC0.23□□□□□ -2.37
UBFD1O14562 RNU7-175P-201ENST00000515915 61 ntBASIC0.23□□□□□ -2.37
UBFD1O14562 RN7SKP12-201ENST00000516275 143 ntBASIC0.23□□□□□ -2.37
UBFD1O14562 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.23□□□□□ -2.37
UBFD1O14562 MIR4764-201ENST00000580680 88 ntBASIC0.23□□□□□ -2.37
UBFD1O14562 AC027279.3-201ENST00000625055 122 ntBASIC0.23□□□□□ -2.37
UBFD1O14562 U6.115-201ENST00000636045 103 ntBASIC0.23□□□□□ -2.37
UBFD1O14562 MIR6863-201ENST00000636112 90 ntBASIC0.23□□□□□ -2.37
UBFD1O14562 Y_RNA.106-201ENST00000363189 100 ntBASIC0.22□□□□□ -2.37
UBFD1O14562 Y_RNA.553-201ENST00000384670 102 ntBASIC0.22□□□□□ -2.37
UBFD1O14562 MIR329-1-201ENST00000385028 80 ntBASIC0.22□□□□□ -2.37
UBFD1O14562 SNORD105-201ENST00000386910 85 ntBASIC0.22□□□□□ -2.37
UBFD1O14562 RNU7-66P-201ENST00000459469 62 ntBASIC0.22□□□□□ -2.37
UBFD1O14562 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.22□□□□□ -2.37
UBFD1O14562 RNU6-1278P-201ENST00000516130 107 ntBASIC0.22□□□□□ -2.37
UBFD1O14562 RNA5SP134-201ENST00000516492 96 ntBASIC0.22□□□□□ -2.37
UBFD1O14562 SNORA18.7-201ENST00000516910 131 ntBASIC0.22□□□□□ -2.37
UBFD1O14562 AL358944.1-201ENST00000528537 144 ntBASIC0.22□□□□□ -2.37
UBFD1O14562 AP003327.1-201ENST00000529684 127 ntBASIC0.22□□□□□ -2.37
UBFD1O14562 AC125232.2-201ENST00000592457 143 ntBASIC0.22□□□□□ -2.37
UBFD1O14562 AL360085.1-201ENST00000604713 532 ntBASIC0.22□□□□□ -2.37
UBFD1O14562 AC124303.1-201ENST00000605703 360 ntBASIC0.22□□□□□ -2.37
UBFD1O14562 AL591926.4-201ENST00000616895 298 ntBASIC0.22□□□□□ -2.37
UBFD1O14562 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.21□□□□□ -2.38
UBFD1O14562 MIRLET7D-201ENST00000362263 87 ntBASIC0.21□□□□□ -2.38
UBFD1O14562 Y_RNA.48-201ENST00000362710 103 ntBASIC0.21□□□□□ -2.38
UBFD1O14562 RNU5F-3P-201ENST00000363767 117 ntBASIC0.21□□□□□ -2.38
UBFD1O14562 RNU6-1264P-201ENST00000383891 107 ntBASIC0.21□□□□□ -2.38
UBFD1O14562 MIR452-201ENST00000385020 85 ntBASIC0.21□□□□□ -2.38
UBFD1O14562 MIR520G-201ENST00000385064 90 ntBASIC0.21□□□□□ -2.38
UBFD1O14562 RNU6-780P-201ENST00000391030 104 ntBASIC0.21□□□□□ -2.38
UBFD1O14562 DEFB108C-201ENST00000400154 252 ntBASIC0.21□□□□□ -2.38
UBFD1O14562 SNORD111-201ENST00000408139 94 ntBASIC0.21□□□□□ -2.38
UBFD1O14562 MIR1827-201ENST00000408549 66 ntBASIC0.21□□□□□ -2.38
UBFD1O14562 RNU6-994P-201ENST00000410507 111 ntBASIC0.21□□□□□ -2.38
UBFD1O14562 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.21□□□□□ -2.38
UBFD1O14562 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.21□□□□□ -2.38
UBFD1O14562 AL392103.1-201ENST00000447000 198 ntBASIC0.21□□□□□ -2.38
UBFD1O14562 RNU6-1114P-201ENST00000516022 107 ntBASIC0.21□□□□□ -2.38
UBFD1O14562 RNA5SP395-201ENST00000516567 118 ntBASIC0.21□□□□□ -2.38
UBFD1O14562 RNA5SP285-201ENST00000516619 119 ntBASIC0.21□□□□□ -2.38
UBFD1O14562 AL158211.1-201ENST00000566763 763 ntBASIC0.21□□□□□ -2.38
UBFD1O14562 AC006362.1-201ENST00000567392 174 ntBASIC0.21□□□□□ -2.38
UBFD1O14562 MIR4300-201ENST00000581016 96 ntBASIC0.21□□□□□ -2.38
UBFD1O14562 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
UBFD1O14562 AC092954.2-201ENST00000609103 430 ntBASIC0.21□□□□□ -2.38
UBFD1O14562 Y_RNA.135-201ENST00000363439 95 ntBASIC0.2□□□□□ -2.38
UBFD1O14562 RNU6-1085P-201ENST00000363576 107 ntBASIC0.2□□□□□ -2.38
UBFD1O14562 RNU6-1059P-201ENST00000363752 98 ntBASIC0.2□□□□□ -2.38
UBFD1O14562 Y_RNA.212-201ENST00000364177 102 ntBASIC0.2□□□□□ -2.38
UBFD1O14562 SNORD113.3-201ENST00000364630 78 ntBASIC0.2□□□□□ -2.38
UBFD1O14562 MIR873-201ENST00000401120 77 ntBASIC0.2□□□□□ -2.38
UBFD1O14562 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.2□□□□□ -2.38
UBFD1O14562 AC067940.1-201ENST00000458411 300 ntBASIC0.2□□□□□ -2.38
UBFD1O14562 TRBVB-201ENST00000477100 408 ntBASIC0.2□□□□□ -2.38
UBFD1O14562 RNU6-256P-201ENST00000516747 97 ntBASIC0.2□□□□□ -2.38
UBFD1O14562 Y_RNA.717-201ENST00000517106 92 ntBASIC0.2□□□□□ -2.38
UBFD1O14562 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.2□□□□□ -2.38
UBFD1O14562 AC121247.2-201ENST00000604776 136 ntBASIC0.2□□□□□ -2.38
UBFD1O14562 AC005828.6-201ENST00000606610 232 ntBASIC0.2□□□□□ -2.38
UBFD1O14562 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.2□□□□□ -2.38
UBFD1O14562 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.2□□□□□ -2.38
UBFD1O14562 Z69908.1-201ENST00000622603 247 ntBASIC0.2□□□□□ -2.38
UBFD1O14562 AC068137.3-201ENST00000639191 341 ntBASIC0.2□□□□□ -2.38
UBFD1O14562 RNU6-369P-201ENST00000362515 102 ntBASIC0.19□□□□□ -2.38
UBFD1O14562 RNU6-595P-201ENST00000363944 107 ntBASIC0.19□□□□□ -2.38
UBFD1O14562 SNORD14.1-201ENST00000365609 90 ntBASIC0.19□□□□□ -2.38
UBFD1O14562 Y_RNA.458-201ENST00000384240 102 ntBASIC0.19□□□□□ -2.38
UBFD1O14562 RNU6-1145P-201ENST00000384246 107 ntBASIC0.19□□□□□ -2.38
UBFD1O14562 Y_RNA.481-201ENST00000384373 102 ntBASIC0.19□□□□□ -2.38
UBFD1O14562 MIR140-201ENST00000385282 100 ntBASIC0.19□□□□□ -2.38
UBFD1O14562 RNU6-177P-201ENST00000411257 104 ntBASIC0.19□□□□□ -2.38
UBFD1O14562 AL354751.2-201ENST00000415471 210 ntBASIC0.19□□□□□ -2.38
UBFD1O14562 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.19□□□□□ -2.38
UBFD1O14562 EIF1P2-201ENST00000428233 350 ntBASIC0.19□□□□□ -2.38
UBFD1O14562 USP9YP16-201ENST00000430287 407 ntBASIC0.19□□□□□ -2.38
UBFD1O14562 UQCRBP2-201ENST00000447827 297 ntBASIC0.19□□□□□ -2.38
UBFD1O14562 USP9YP23-201ENST00000455085 407 ntBASIC0.19□□□□□ -2.38
UBFD1O14562 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.19□□□□□ -2.38
UBFD1O14562 SNORA25.10-201ENST00000515926 124 ntBASIC0.19□□□□□ -2.38
UBFD1O14562 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.19□□□□□ -2.38
UBFD1O14562 MIR4273-201ENST00000582824 84 ntBASIC0.19□□□□□ -2.38
UBFD1O14562 AL136317.1-201ENST00000612653 226 ntBASIC0.19□□□□□ -2.38
UBFD1O14562 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
UBFD1O14562 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
UBFD1O14562 AC117470.1-201ENST00000381974 330 ntBASIC0.18□□□□□ -2.38
UBFD1O14562 RNU6-35P-201ENST00000384530 107 ntBASIC0.18□□□□□ -2.38
UBFD1O14562 SNORA2B-201ENST00000384583 137 ntBASIC0.18□□□□□ -2.38
UBFD1O14562 MIR136-201ENST00000385207 82 ntBASIC0.18□□□□□ -2.38
UBFD1O14562 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.18□□□□□ -2.38
UBFD1O14562 Y_RNA.621-201ENST00000411065 96 ntBASIC0.18□□□□□ -2.38
UBFD1O14562 DLGAP5P1-201ENST00000430307 464 ntBASIC0.18□□□□□ -2.38
UBFD1O14562 NDUFA4P2-201ENST00000489989 244 ntBASIC0.18□□□□□ -2.38
UBFD1O14562 AC010424.1-201ENST00000506336 297 ntBASIC0.18□□□□□ -2.38
UBFD1O14562 Y_RNA.693-201ENST00000516641 110 ntBASIC0.18□□□□□ -2.38
UBFD1O14562 Y_RNA.704-201ENST00000516851 102 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms