Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
RFXAPO00287 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
RFXAPO00287 RNA5SP99-201ENST00000364020 114 ntBASIC2.93□□□□□ -1.94
RFXAPO00287 MIR181A2-201ENST00000384863 110 ntBASIC2.93□□□□□ -1.94
RFXAPO00287 MIR1283-1-201ENST00000408494 87 ntBASIC2.93□□□□□ -1.94
RFXAPO00287 CALM2P4-201ENST00000430810 426 ntBASIC2.93□□□□□ -1.94
RFXAPO00287 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.93□□□□□ -1.94
RFXAPO00287 RPL36AP21-201ENST00000490372 323 ntBASIC2.93□□□□□ -1.94
RFXAPO00287 AC096725.1-201ENST00000514266 313 ntBASIC2.93□□□□□ -1.94
RFXAPO00287 uc_338.4-201ENST00000616635 176 ntBASIC2.93□□□□□ -1.94
RFXAPO00287 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.93□□□□□ -1.94
RFXAPO00287 MAPK10-362ENST00000641864 4484 ntBASIC2.92□□□□□ -1.94
RFXAPO00287 AC026241.1-201ENST00000517873 2142 ntBASIC2.92□□□□□ -1.94
RFXAPO00287 RNU6-1107P-201ENST00000364817 104 ntBASIC2.92□□□□□ -1.94
RFXAPO00287 Y_RNA.346-201ENST00000365385 112 ntBASIC2.92□□□□□ -1.94
RFXAPO00287 RNU6-198P-201ENST00000384258 104 ntBASIC2.92□□□□□ -1.94
RFXAPO00287 MIR891A-201ENST00000401237 79 ntBASIC2.92□□□□□ -1.94
RFXAPO00287 RNU2-55P-201ENST00000411146 174 ntBASIC2.92□□□□□ -1.94
RFXAPO00287 AC245102.2-201ENST00000448956 180 ntBASIC2.92□□□□□ -1.94
RFXAPO00287 RNU7-14P-201ENST00000459331 62 ntBASIC2.92□□□□□ -1.94
RFXAPO00287 Y_RNA.676-201ENST00000516393 96 ntBASIC2.92□□□□□ -1.94
RFXAPO00287 AC245166.1-201ENST00000521012 253 ntBASIC2.92□□□□□ -1.94
RFXAPO00287 AC018630.3-201ENST00000542637 96 ntBASIC2.92□□□□□ -1.94
RFXAPO00287 MIR3117-201ENST00000584034 78 ntBASIC2.92□□□□□ -1.94
RFXAPO00287 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.92□□□□□ -1.94
RFXAPO00287 AC009831.4-201ENST00000620744 325 ntBASIC2.92□□□□□ -1.94
RFXAPO00287 AL035470.1-201ENST00000622571 220 ntBASIC2.92□□□□□ -1.94
RFXAPO00287 AC008264.2-201ENST00000610193 3731 ntBASIC2.92□□□□□ -1.94
RFXAPO00287 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
RFXAPO00287 AC010680.1-201ENST00000590024 3590 ntBASIC2.92□□□□□ -1.94
RFXAPO00287 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.92□□□□□ -1.94
RFXAPO00287 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.91□□□□□ -1.94
RFXAPO00287 Y_RNA.66-201ENST00000362862 102 ntBASIC2.91□□□□□ -1.94
RFXAPO00287 RNU6-944P-201ENST00000364023 107 ntBASIC2.91□□□□□ -1.94
RFXAPO00287 Y_RNA.203-201ENST00000364106 102 ntBASIC2.91□□□□□ -1.94
RFXAPO00287 Y_RNA.796-201ENST00000364268 102 ntBASIC2.91□□□□□ -1.94
RFXAPO00287 Y_RNA.799-201ENST00000364992 102 ntBASIC2.91□□□□□ -1.94
RFXAPO00287 RNU6-294P-201ENST00000364999 102 ntBASIC2.91□□□□□ -1.94
RFXAPO00287 Y_RNA.328-201ENST00000365208 113 ntBASIC2.91□□□□□ -1.94
RFXAPO00287 SNORD18B-201ENST00000365659 72 ntBASIC2.91□□□□□ -1.94
RFXAPO00287 SNORA1-201ENST00000384107 130 ntBASIC2.91□□□□□ -1.94
RFXAPO00287 Y_RNA.486-201ENST00000384398 107 ntBASIC2.91□□□□□ -1.94
RFXAPO00287 RNU6-750P-201ENST00000390946 107 ntBASIC2.91□□□□□ -1.94
RFXAPO00287 RN7SKP123-201ENST00000410732 291 ntBASIC2.91□□□□□ -1.94
RFXAPO00287 RPS4XP11-201ENST00000446897 772 ntBASIC2.91□□□□□ -1.94
RFXAPO00287 RNU6-221P-201ENST00000459541 99 ntBASIC2.91□□□□□ -1.94
RFXAPO00287 AC010598.1-201ENST00000510378 103 ntBASIC2.91□□□□□ -1.94
RFXAPO00287 RNA5SP385-201ENST00000515947 110 ntBASIC2.91□□□□□ -1.94
RFXAPO00287 RNA5SP153-201ENST00000516498 76 ntBASIC2.91□□□□□ -1.94
RFXAPO00287 AC025647.1-201ENST00000517879 253 ntBASIC2.91□□□□□ -1.94
RFXAPO00287 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.91□□□□□ -1.94
RFXAPO00287 AC105245.1-201ENST00000581934 244 ntBASIC2.91□□□□□ -1.94
RFXAPO00287 AC006111.3-201ENST00000622137 383 ntBASIC2.91□□□□□ -1.94
RFXAPO00287 AC073476.4-201ENST00000628409 72 ntBASIC2.91□□□□□ -1.94
RFXAPO00287 AL159152.1-201ENST00000635019 2587 ntBASIC2.91□□□□□ -1.94
RFXAPO00287 RNU6-1209P-201ENST00000363655 107 ntBASIC2.9□□□□□ -1.95
RFXAPO00287 RNU6-271P-201ENST00000363858 105 ntBASIC2.9□□□□□ -1.95
RFXAPO00287 Y_RNA.281-201ENST00000364774 94 ntBASIC2.9□□□□□ -1.95
RFXAPO00287 RNA5SP167-201ENST00000365461 116 ntBASIC2.9□□□□□ -1.95
RFXAPO00287 MIR488-201ENST00000365739 83 ntBASIC2.9□□□□□ -1.95
RFXAPO00287 MIR512-1-201ENST00000384913 84 ntBASIC2.9□□□□□ -1.95
RFXAPO00287 MIR592-201ENST00000384959 97 ntBASIC2.9□□□□□ -1.95
RFXAPO00287 RPL21P3-201ENST00000395517 478 ntBASIC2.9□□□□□ -1.95
RFXAPO00287 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.9□□□□□ -1.95
RFXAPO00287 RNA5SP274-201ENST00000410484 108 ntBASIC2.9□□□□□ -1.95
RFXAPO00287 TRIAP1P1-201ENST00000427062 225 ntBASIC2.9□□□□□ -1.95
RFXAPO00287 AC244505.4-201ENST00000434905 287 ntBASIC2.9□□□□□ -1.95
RFXAPO00287 SSXP5-201ENST00000443473 287 ntBASIC2.9□□□□□ -1.95
RFXAPO00287 RPL36AP48-201ENST00000485521 314 ntBASIC2.9□□□□□ -1.95
RFXAPO00287 AC108210.2-201ENST00000503681 201 ntBASIC2.9□□□□□ -1.95
RFXAPO00287 RNA5SP217-201ENST00000515959 91 ntBASIC2.9□□□□□ -1.95
RFXAPO00287 RNA5SP236-201ENST00000516169 116 ntBASIC2.9□□□□□ -1.95
RFXAPO00287 AC079598.5-201ENST00000547460 117 ntBASIC2.9□□□□□ -1.95
RFXAPO00287 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.9□□□□□ -1.95
RFXAPO00287 MIR3129-201ENST00000581095 76 ntBASIC2.9□□□□□ -1.95
RFXAPO00287 AC090517.3-201ENST00000625170 141 ntBASIC2.9□□□□□ -1.95
RFXAPO00287 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RFXAPO00287 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
RFXAPO00287 AC093831.2-201ENST00000624393 3427 ntBASIC2.89□□□□□ -1.95
RFXAPO00287 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
RFXAPO00287 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RFXAPO00287 RNU4-13P-201ENST00000364019 141 ntBASIC2.89□□□□□ -1.95
RFXAPO00287 RNU6-756P-201ENST00000383997 107 ntBASIC2.89□□□□□ -1.95
RFXAPO00287 RNU6-975P-201ENST00000384296 105 ntBASIC2.89□□□□□ -1.95
RFXAPO00287 Y_RNA.528-201ENST00000384575 108 ntBASIC2.89□□□□□ -1.95
RFXAPO00287 SNORD12C-201ENST00000386307 89 ntBASIC2.89□□□□□ -1.95
RFXAPO00287 SNORD72-201ENST00000390994 80 ntBASIC2.89□□□□□ -1.95
RFXAPO00287 RNA5SP252-201ENST00000391131 119 ntBASIC2.89□□□□□ -1.95
RFXAPO00287 Z98742.2-201ENST00000431564 187 ntBASIC2.89□□□□□ -1.95
RFXAPO00287 AL021397.1-201ENST00000451806 248 ntBASIC2.89□□□□□ -1.95
RFXAPO00287 RPL30P14-201ENST00000482744 348 ntBASIC2.89□□□□□ -1.95
RFXAPO00287 RNU6-991P-201ENST00000516168 107 ntBASIC2.89□□□□□ -1.95
RFXAPO00287 SNORA18.4-201ENST00000516440 124 ntBASIC2.89□□□□□ -1.95
RFXAPO00287 RNU7-149P-201ENST00000516739 59 ntBASIC2.89□□□□□ -1.95
RFXAPO00287 RNU1-104P-201ENST00000517280 175 ntBASIC2.89□□□□□ -1.95
RFXAPO00287 AP001318.4-201ENST00000616637 121 ntBASIC2.89□□□□□ -1.95
RFXAPO00287 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
RFXAPO00287 Y_RNA.85-201ENST00000363014 111 ntBASIC2.88□□□□□ -1.95
RFXAPO00287 Y_RNA.163-201ENST00000363702 113 ntBASIC2.88□□□□□ -1.95
RFXAPO00287 RNU6-418P-201ENST00000384035 107 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms