Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 SNORA40.6-201ENST00000391153 128 ntBASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 AL031003.1-201ENST00000404229 172 ntBASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 Y_RNA.602-201ENST00000410535 92 ntBASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 NDUFB4P10-201ENST00000452541 359 ntBASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 AC097462.1-201ENST00000514125 324 ntBASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 AC074133.1-201ENST00000515696 183 ntBASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 SNORA25.10-201ENST00000515926 124 ntBASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 RN7SKP179-201ENST00000516126 217 ntBASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 RNU6-436P-201ENST00000516171 114 ntBASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 RNU6-911P-201ENST00000516523 104 ntBASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 AC131281.1-201ENST00000522984 164 ntBASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 MIR4300-201ENST00000581016 96 ntBASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 AL390123.1-201ENST00000603216 237 ntBASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 AC005828.6-201ENST00000606610 232 ntBASIC1.22□□□□□ -2.21
TRIM49D1C9J1S8 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
TRIM49D1C9J1S8 MIR410-201ENST00000362222 80 ntBASIC1.21□□□□□ -2.22
TRIM49D1C9J1S8 RNU6-1048P-201ENST00000364054 107 ntBASIC1.21□□□□□ -2.22
TRIM49D1C9J1S8 Y_RNA.214-201ENST00000364201 112 ntBASIC1.21□□□□□ -2.22
TRIM49D1C9J1S8 SNORA63D-201ENST00000364359 132 ntBASIC1.21□□□□□ -2.22
TRIM49D1C9J1S8 RNU6-117P-201ENST00000365415 107 ntBASIC1.21□□□□□ -2.22
TRIM49D1C9J1S8 Y_RNA.361-201ENST00000365515 120 ntBASIC1.21□□□□□ -2.22
TRIM49D1C9J1S8 RNU6-505P-201ENST00000384427 107 ntBASIC1.21□□□□□ -2.22
TRIM49D1C9J1S8 RPL21P1-201ENST00000399532 476 ntBASIC1.21□□□□□ -2.22
TRIM49D1C9J1S8 MRPL35P1-201ENST00000404272 572 ntBASIC1.21□□□□□ -2.22
TRIM49D1C9J1S8 MIR1253-201ENST00000408273 105 ntBASIC1.21□□□□□ -2.22
TRIM49D1C9J1S8 AC005534.2-201ENST00000431047 433 ntBASIC1.21□□□□□ -2.22
TRIM49D1C9J1S8 AC091021.1-201ENST00000468051 388 ntBASIC1.21□□□□□ -2.22
TRIM49D1C9J1S8 AC099513.1-201ENST00000490423 301 ntBASIC1.21□□□□□ -2.22
TRIM49D1C9J1S8 RNU2-34P-201ENST00000516534 121 ntBASIC1.21□□□□□ -2.22
TRIM49D1C9J1S8 RNU6-1291P-201ENST00000516591 104 ntBASIC1.21□□□□□ -2.22
TRIM49D1C9J1S8 AL929325.1-201ENST00000603096 117 ntBASIC1.21□□□□□ -2.22
TRIM49D1C9J1S8 AC069114.2-201ENST00000604699 304 ntBASIC1.21□□□□□ -2.22
TRIM49D1C9J1S8 U6.73-201ENST00000619194 103 ntBASIC1.21□□□□□ -2.22
TRIM49D1C9J1S8 AC010615.1-201ENST00000594254 1764 ntBASIC1.21□□□□□ -2.22
TRIM49D1C9J1S8 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 AL161722.3-201ENST00000605789 2983 ntBASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 snoU2_19.2-201ENST00000363024 80 ntBASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 Y_RNA.243-201ENST00000364481 109 ntBASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 RNU4-76P-201ENST00000364509 141 ntBASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 SNORA63C-201ENST00000364578 129 ntBASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 Y_RNA.418-201ENST00000384029 102 ntBASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 RNU2-54P-201ENST00000410299 190 ntBASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 RNU2-14P-201ENST00000411053 191 ntBASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 CST2P1-201ENST00000425770 87 ntBASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 AC009474.2-201ENST00000451383 136 ntBASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 HSPE1P25-201ENST00000455484 251 ntBASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 RNU6-1053P-201ENST00000515930 101 ntBASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 RNA5SP20-201ENST00000515976 84 ntBASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 SCARNA15.1-201ENST00000516384 125 ntBASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 MIR2355-201ENST00000517199 87 ntBASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 RNU6-988P-201ENST00000519081 107 ntBASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 AC022441.3-201ENST00000605737 136 ntBASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 AC010205.1-201ENST00000616668 449 ntBASIC1.2□□□□□ -2.22
TRIM49D1C9J1S8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 Y_RNA.158-201ENST00000363651 101 ntBASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 RNU6-324P-201ENST00000363957 106 ntBASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 SNORA72.2-201ENST00000365028 127 ntBASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 Y_RNA.331-201ENST00000365267 102 ntBASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 Y_RNA.424-201ENST00000384063 103 ntBASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 Y_RNA.455-201ENST00000384230 98 ntBASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 Y_RNA.541-201ENST00000384640 113 ntBASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 RNA5SP511-201ENST00000410487 115 ntBASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 RNA5SP475-201ENST00000410568 110 ntBASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 LINC01399-202ENST00000458450 244 ntBASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 RPS26P55-201ENST00000471178 356 ntBASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 MRPS35P2-201ENST00000508242 191 ntBASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 RNU6-1337P-201ENST00000516525 95 ntBASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 RNU7-110P-201ENST00000516891 62 ntBASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 MIR4421-201ENST00000578133 69 ntBASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 MIR4422-201ENST00000581938 83 ntBASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 AL121655.1-201ENST00000605811 308 ntBASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
TRIM49D1C9J1S8 Y_RNA.11-201ENST00000362375 109 ntBASIC1.18□□□□□ -2.22
TRIM49D1C9J1S8 RNU4-80P-201ENST00000363200 141 ntBASIC1.18□□□□□ -2.22
TRIM49D1C9J1S8 SNORD113-8-201ENST00000363497 74 ntBASIC1.18□□□□□ -2.22
TRIM49D1C9J1S8 SNORA7.1-201ENST00000363750 139 ntBASIC1.18□□□□□ -2.22
TRIM49D1C9J1S8 Y_RNA.551-201ENST00000384661 102 ntBASIC1.18□□□□□ -2.22
TRIM49D1C9J1S8 RNA5SP323-201ENST00000391094 133 ntBASIC1.18□□□□□ -2.22
TRIM49D1C9J1S8 MIR1252-201ENST00000408861 65 ntBASIC1.18□□□□□ -2.22
TRIM49D1C9J1S8 AC008134.1-201ENST00000420943 193 ntBASIC1.18□□□□□ -2.22
TRIM49D1C9J1S8 RPS26P45-201ENST00000471748 340 ntBASIC1.18□□□□□ -2.22
TRIM49D1C9J1S8 AC010598.1-201ENST00000510378 103 ntBASIC1.18□□□□□ -2.22
TRIM49D1C9J1S8 RNU6-475P-201ENST00000516073 104 ntBASIC1.18□□□□□ -2.22
TRIM49D1C9J1S8 RNU6-764P-201ENST00000516396 105 ntBASIC1.18□□□□□ -2.22
TRIM49D1C9J1S8 RNU7-172P-201ENST00000517125 64 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms