Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RNA5SP323-201ENST00000391094 133 ntBASIC1.95□□□□□ -2.1
TCRBV7S3A2A0A539 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TCRBV7S3A2A0A539 AC104332.1-201ENST00000440471 797 ntBASIC1.95□□□□□ -2.1
TCRBV7S3A2A0A539 SNORD2.1-201ENST00000458762 69 ntBASIC1.95□□□□□ -2.1
TCRBV7S3A2A0A539 RNU7-94P-201ENST00000459576 63 ntBASIC1.95□□□□□ -2.1
TCRBV7S3A2A0A539 RNU6-1271P-201ENST00000517049 105 ntBASIC1.95□□□□□ -2.1
TCRBV7S3A2A0A539 AC121758.2-201ENST00000553271 193 ntBASIC1.95□□□□□ -2.1
TCRBV7S3A2A0A539 AC110588.1-201ENST00000559699 137 ntBASIC1.95□□□□□ -2.1
TCRBV7S3A2A0A539 MIR4643-201ENST00000577473 78 ntBASIC1.95□□□□□ -2.1
TCRBV7S3A2A0A539 AC073413.2-201ENST00000604332 360 ntBASIC1.95□□□□□ -2.1
TCRBV7S3A2A0A539 AC018630.2-201ENST00000534866 2403 ntBASIC1.95□□□□□ -2.1
TCRBV7S3A2A0A539 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
TCRBV7S3A2A0A539 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.94□□□□□ -2.1
TCRBV7S3A2A0A539 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
TCRBV7S3A2A0A539 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
TCRBV7S3A2A0A539 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TCRBV7S3A2A0A539 SNORA63D-201ENST00000364359 132 ntBASIC1.94□□□□□ -2.1
TCRBV7S3A2A0A539 Y_RNA.539-201ENST00000384635 107 ntBASIC1.94□□□□□ -2.1
TCRBV7S3A2A0A539 RNU6-376P-201ENST00000384731 106 ntBASIC1.94□□□□□ -2.1
TCRBV7S3A2A0A539 RNU6-763P-201ENST00000390865 106 ntBASIC1.94□□□□□ -2.1
TCRBV7S3A2A0A539 SNORA26.5-201ENST00000391215 123 ntBASIC1.94□□□□□ -2.1
TCRBV7S3A2A0A539 AL135786.1-201ENST00000415892 214 ntBASIC1.94□□□□□ -2.1
TCRBV7S3A2A0A539 AC069257.2-201ENST00000441819 155 ntBASIC1.94□□□□□ -2.1
TCRBV7S3A2A0A539 RPS29P21-201ENST00000496272 170 ntBASIC1.94□□□□□ -2.1
TCRBV7S3A2A0A539 Y_RNA.673-201ENST00000516306 88 ntBASIC1.94□□□□□ -2.1
TCRBV7S3A2A0A539 RNU7-116P-201ENST00000516940 62 ntBASIC1.94□□□□□ -2.1
TCRBV7S3A2A0A539 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.94□□□□□ -2.1
TCRBV7S3A2A0A539 AL590808.1-201ENST00000618696 141 ntBASIC1.94□□□□□ -2.1
TCRBV7S3A2A0A539 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.94□□□□□ -2.1
TCRBV7S3A2A0A539 snoU18.1-201ENST00000629629 71 ntBASIC1.94□□□□□ -2.1
TCRBV7S3A2A0A539 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
TCRBV7S3A2A0A539 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
TCRBV7S3A2A0A539 Y_RNA.60-201ENST00000362831 98 ntBASIC1.93□□□□□ -2.1
TCRBV7S3A2A0A539 Y_RNA.122-201ENST00000363331 96 ntBASIC1.93□□□□□ -2.1
TCRBV7S3A2A0A539 SNORA16B-201ENST00000364674 135 ntBASIC1.93□□□□□ -2.1
TCRBV7S3A2A0A539 Y_RNA.277-201ENST00000364754 102 ntBASIC1.93□□□□□ -2.1
TCRBV7S3A2A0A539 SNORA20.1-201ENST00000364790 130 ntBASIC1.93□□□□□ -2.1
TCRBV7S3A2A0A539 Y_RNA.477-201ENST00000384352 108 ntBASIC1.93□□□□□ -2.1
TCRBV7S3A2A0A539 MIR520G-201ENST00000385064 90 ntBASIC1.93□□□□□ -2.1
TCRBV7S3A2A0A539 RNU2-14P-201ENST00000411053 191 ntBASIC1.93□□□□□ -2.1
TCRBV7S3A2A0A539 RPS27P1-201ENST00000450552 247 ntBASIC1.93□□□□□ -2.1
TCRBV7S3A2A0A539 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.93□□□□□ -2.1
TCRBV7S3A2A0A539 RNU7-115P-201ENST00000516433 55 ntBASIC1.93□□□□□ -2.1
TCRBV7S3A2A0A539 AP003357.1-201ENST00000604497 148 ntBASIC1.93□□□□□ -2.1
TCRBV7S3A2A0A539 SCARNA15.3-201ENST00000626315 122 ntBASIC1.93□□□□□ -2.1
TCRBV7S3A2A0A539 SCARNA4.1-201ENST00000628597 123 ntBASIC1.93□□□□□ -2.1
TCRBV7S3A2A0A539 MIR6079-201ENST00000635807 62 ntBASIC1.93□□□□□ -2.1
TCRBV7S3A2A0A539 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.93□□□□□ -2.1
TCRBV7S3A2A0A539 AC008555.8-201ENST00000623602 2168 ntBASIC1.93□□□□□ -2.1
TCRBV7S3A2A0A539 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.93□□□□□ -2.1
TCRBV7S3A2A0A539 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TCRBV7S3A2A0A539 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TCRBV7S3A2A0A539 RNU6-379P-201ENST00000363813 104 ntBASIC1.92□□□□□ -2.1
TCRBV7S3A2A0A539 RNU6-899P-201ENST00000363947 107 ntBASIC1.92□□□□□ -2.1
TCRBV7S3A2A0A539 RNY1-201ENST00000364228 113 ntBASIC1.92□□□□□ -2.1
TCRBV7S3A2A0A539 Y_RNA.476-201ENST00000384347 108 ntBASIC1.92□□□□□ -2.1
TCRBV7S3A2A0A539 MIR562-201ENST00000384894 95 ntBASIC1.92□□□□□ -2.1
TCRBV7S3A2A0A539 AL355497.1-201ENST00000406262 551 ntBASIC1.92□□□□□ -2.1
TCRBV7S3A2A0A539 HMGN2P19-201ENST00000425149 265 ntBASIC1.92□□□□□ -2.1
TCRBV7S3A2A0A539 RNU7-141P-201ENST00000459304 62 ntBASIC1.92□□□□□ -2.1
TCRBV7S3A2A0A539 RN7SL274P-201ENST00000492268 272 ntBASIC1.92□□□□□ -2.1
TCRBV7S3A2A0A539 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.92□□□□□ -2.1
TCRBV7S3A2A0A539 RNU6-341P-201ENST00000516973 96 ntBASIC1.92□□□□□ -2.1
TCRBV7S3A2A0A539 AL358944.1-201ENST00000528537 144 ntBASIC1.92□□□□□ -2.1
TCRBV7S3A2A0A539 AC022217.4-201ENST00000604389 163 ntBASIC1.92□□□□□ -2.1
TCRBV7S3A2A0A539 AC064859.1-201ENST00000624741 174 ntBASIC1.92□□□□□ -2.1
TCRBV7S3A2A0A539 MIR203B-201ENST00000636080 86 ntBASIC1.92□□□□□ -2.1
TCRBV7S3A2A0A539 AC068647.2-201ENST00000637380 353 ntBASIC1.92□□□□□ -2.1
TCRBV7S3A2A0A539 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.92□□□□□ -2.1
TCRBV7S3A2A0A539 ZNF658B-202ENST00000615961 3375 ntBASIC1.92□□□□□ -2.1
TCRBV7S3A2A0A539 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 Y_RNA.54-201ENST00000362766 105 ntBASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 Y_RNA.117-201ENST00000363294 101 ntBASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 RNU6-112P-201ENST00000363599 104 ntBASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 SNORD27-201ENST00000363981 72 ntBASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 U8.7-201ENST00000364940 136 ntBASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 RNU6-211P-201ENST00000384047 107 ntBASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 RNU6-296P-201ENST00000384608 107 ntBASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 RNA5SP425-201ENST00000410336 112 ntBASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 RNA5SP100-201ENST00000410903 110 ntBASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 RNA5SP59-201ENST00000410922 110 ntBASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 RNU6-651P-201ENST00000411040 105 ntBASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 AL158823.1-201ENST00000418441 478 ntBASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 AC003989.2-201ENST00000440224 169 ntBASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 RPS4XP11-201ENST00000446897 772 ntBASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 U8.19-201ENST00000459095 133 ntBASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 AL008718.3-201ENST00000610217 321 ntBASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 AC013791.1-201ENST00000616619 62 ntBASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 MIR548AY-201ENST00000617669 107 ntBASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 AC245060.5-201ENST00000610778 3293 ntBASIC1.91□□□□□ -2.1
TCRBV7S3A2A0A539 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
TCRBV7S3A2A0A539 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.1
TCRBV7S3A2A0A539 AC100821.1-201ENST00000523153 2479 ntBASIC1.9□□□□□ -2.11
TCRBV7S3A2A0A539 RNU4-13P-201ENST00000364019 141 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms