Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AL353572.1-201ENST00000442490 417 ntBASIC-0.48□□□□□ -2.49
TRAV5A0A0B4J249 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.48□□□□□ -2.49
TRAV5A0A0B4J249 RNU7-165P-201ENST00000458864 60 ntBASIC-0.48□□□□□ -2.49
TRAV5A0A0B4J249 RNU7-102P-201ENST00000458948 62 ntBASIC-0.48□□□□□ -2.49
TRAV5A0A0B4J249 AC093303.1-201ENST00000514549 295 ntBASIC-0.48□□□□□ -2.49
TRAV5A0A0B4J249 RN7SKP287-201ENST00000516546 266 ntBASIC-0.48□□□□□ -2.49
TRAV5A0A0B4J249 RNU6-782P-201ENST00000516852 104 ntBASIC-0.48□□□□□ -2.49
TRAV5A0A0B4J249 AL158050.2-201ENST00000605336 568 ntBASIC-0.48□□□□□ -2.49
TRAV5A0A0B4J249 HULC.1-201ENST00000612720 240 ntBASIC-0.48□□□□□ -2.49
TRAV5A0A0B4J249 AC016597.2-201ENST00000613256 341 ntBASIC-0.48□□□□□ -2.49
TRAV5A0A0B4J249 AC009248.2-201ENST00000619826 254 ntBASIC-0.48□□□□□ -2.49
TRAV5A0A0B4J249 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.48□□□□□ -2.49
TRAV5A0A0B4J249 RNU6-161P-201ENST00000363051 106 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 RNA5SP275-201ENST00000363936 118 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 RNU6-35P-201ENST00000384530 107 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 MIR106A-201ENST00000384870 81 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 RNU6-159P-201ENST00000391080 106 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 RNU6-447P-201ENST00000410293 104 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 RNU6-355P-201ENST00000410427 104 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 RNU6-791P-201ENST00000410467 104 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 RNU6-705P-201ENST00000410601 104 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 RNU6-860P-201ENST00000410860 104 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 RNU6-785P-201ENST00000411324 104 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 Z95118.1-201ENST00000421372 247 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 RNU7-159P-201ENST00000459284 62 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 AC116353.2-201ENST00000505332 712 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 CCDC34P1-201ENST00000507441 517 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 RNA5SP395-201ENST00000516567 118 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 AL157687.1-201ENST00000554853 619 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 CPDP1-201ENST00000579660 283 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 AL357078.3-201ENST00000607528 618 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 U6.90-201ENST00000614007 104 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 U6.70-201ENST00000620287 104 ntBASIC-0.49□□□□□ -2.49
TRAV5A0A0B4J249 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 SNORD50.1-201ENST00000362987 71 ntBASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 SNORD115-32-201ENST00000364079 82 ntBASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 RNU6-187P-201ENST00000384139 106 ntBASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 MIR1265-201ENST00000408444 86 ntBASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 MTND4LP11-201ENST00000422184 280 ntBASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 MTCYBP8-201ENST00000422855 651 ntBASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 AC079354.2-201ENST00000453523 154 ntBASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 RNU7-180P-201ENST00000459240 63 ntBASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 MTND4P7-201ENST00000523876 130 ntBASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 ELOCP32-201ENST00000548625 324 ntBASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 MIR3684-201ENST00000579779 74 ntBASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 AL022161.1-201ENST00000604390 213 ntBASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 AC008536.2-201ENST00000607284 349 ntBASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 FAM157A-202ENST00000615155 405 ntBASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 AC009161.2-201ENST00000624626 138 ntBASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 MIR499B-201ENST00000636498 73 ntBASIC-0.5□□□□□ -2.49
TRAV5A0A0B4J249 RNU6-517P-201ENST00000384362 110 ntBASIC-0.51□□□□□ -2.49
TRAV5A0A0B4J249 SNORA51.10-201ENST00000384418 136 ntBASIC-0.51□□□□□ -2.49
TRAV5A0A0B4J249 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.51□□□□□ -2.49
TRAV5A0A0B4J249 AC096531.1-201ENST00000419107 107 ntBASIC-0.51□□□□□ -2.49
TRAV5A0A0B4J249 AC092447.3-201ENST00000426027 686 ntBASIC-0.51□□□□□ -2.49
TRAV5A0A0B4J249 BTF3P11-201ENST00000426582 477 ntBASIC-0.51□□□□□ -2.49
TRAV5A0A0B4J249 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.51□□□□□ -2.49
TRAV5A0A0B4J249 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.51□□□□□ -2.49
TRAV5A0A0B4J249 MTATP6P14-201ENST00000455189 673 ntBASIC-0.51□□□□□ -2.49
TRAV5A0A0B4J249 MTCO1P29-201ENST00000496868 288 ntBASIC-0.51□□□□□ -2.49
TRAV5A0A0B4J249 MIR4493-201ENST00000584016 73 ntBASIC-0.51□□□□□ -2.49
TRAV5A0A0B4J249 TUSC7.1-201ENST00000610969 165 ntBASIC-0.51□□□□□ -2.49
TRAV5A0A0B4J249 uc_338.22-201ENST00000622722 187 ntBASIC-0.51□□□□□ -2.49
TRAV5A0A0B4J249 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.51□□□□□ -2.49
TRAV5A0A0B4J249 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.52□□□□□ -2.49
TRAV5A0A0B4J249 SNORD114-12-201ENST00000365400 75 ntBASIC-0.52□□□□□ -2.49
TRAV5A0A0B4J249 RNU6-125P-201ENST00000384505 107 ntBASIC-0.52□□□□□ -2.49
TRAV5A0A0B4J249 MIR522-201ENST00000385071 87 ntBASIC-0.52□□□□□ -2.49
TRAV5A0A0B4J249 SNORA40.4-201ENST00000390971 128 ntBASIC-0.52□□□□□ -2.49
TRAV5A0A0B4J249 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.52□□□□□ -2.49
TRAV5A0A0B4J249 RNA5SP451-201ENST00000410588 110 ntBASIC-0.52□□□□□ -2.49
TRAV5A0A0B4J249 AL354751.2-201ENST00000415471 210 ntBASIC-0.52□□□□□ -2.49
TRAV5A0A0B4J249 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.52□□□□□ -2.49
TRAV5A0A0B4J249 RNU6-758P-201ENST00000516292 89 ntBASIC-0.52□□□□□ -2.49
TRAV5A0A0B4J249 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.52□□□□□ -2.49
TRAV5A0A0B4J249 MIR4264-201ENST00000583520 66 ntBASIC-0.52□□□□□ -2.49
TRAV5A0A0B4J249 AC245014.2-201ENST00000603689 287 ntBASIC-0.52□□□□□ -2.49
TRAV5A0A0B4J249 AC246785.4-201ENST00000605374 287 ntBASIC-0.52□□□□□ -2.49
TRAV5A0A0B4J249 AC018645.2-201ENST00000609151 472 ntBASIC-0.52□□□□□ -2.49
TRAV5A0A0B4J249 MIR7107-201ENST00000611489 80 ntBASIC-0.52□□□□□ -2.49
TRAV5A0A0B4J249 AC072046.2-201ENST00000618366 268 ntBASIC-0.52□□□□□ -2.49
TRAV5A0A0B4J249 MIR101-1-201ENST00000362265 75 ntBASIC-0.53□□□□□ -2.49
TRAV5A0A0B4J249 SNORA1.1-201ENST00000364671 133 ntBASIC-0.53□□□□□ -2.49
TRAV5A0A0B4J249 MIR604-201ENST00000384880 94 ntBASIC-0.53□□□□□ -2.49
TRAV5A0A0B4J249 MIR122-201ENST00000385044 85 ntBASIC-0.53□□□□□ -2.49
TRAV5A0A0B4J249 MIR873-201ENST00000401120 77 ntBASIC-0.53□□□□□ -2.49
TRAV5A0A0B4J249 BX295541.1-201ENST00000417774 250 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms