Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 SNORA19.2-201ENST00000516013 114 ntBASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 AC104408.1-201ENST00000605241 170 ntBASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 SNORA25.18-201ENST00000607153 114 ntBASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 AL121757.2-201ENST00000611223 313 ntBASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 AC090517.2-201ENST00000614966 680 ntBASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 FAM157A-202ENST00000615155 405 ntBASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 AC079248.2-201ENST00000623779 326 ntBASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 U6.115-201ENST00000636045 103 ntBASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.19□□□□□ -2.44
TRAV3A0A0B4J244 RNU6-934P-201ENST00000365154 107 ntBASIC-0.19□□□□□ -2.44
TRAV3A0A0B4J244 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.19□□□□□ -2.44
TRAV3A0A0B4J244 RNU6-281P-201ENST00000384212 103 ntBASIC-0.19□□□□□ -2.44
TRAV3A0A0B4J244 RNU6-541P-201ENST00000384709 110 ntBASIC-0.19□□□□□ -2.44
TRAV3A0A0B4J244 MIR522-201ENST00000385071 87 ntBASIC-0.19□□□□□ -2.44
TRAV3A0A0B4J244 RNU6-679P-201ENST00000391003 106 ntBASIC-0.19□□□□□ -2.44
TRAV3A0A0B4J244 ELOCP21-201ENST00000412558 336 ntBASIC-0.19□□□□□ -2.44
TRAV3A0A0B4J244 MTCO2P30-201ENST00000503662 364 ntBASIC-0.19□□□□□ -2.44
TRAV3A0A0B4J244 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.19□□□□□ -2.44
TRAV3A0A0B4J244 RN7SKP287-201ENST00000516546 266 ntBASIC-0.19□□□□□ -2.44
TRAV3A0A0B4J244 AC134698.4-201ENST00000523451 826 ntBASIC-0.19□□□□□ -2.44
TRAV3A0A0B4J244 MIR5696-201ENST00000578474 85 ntBASIC-0.19□□□□□ -2.44
TRAV3A0A0B4J244 MIR548AO-201ENST00000579992 96 ntBASIC-0.19□□□□□ -2.44
TRAV3A0A0B4J244 AC109347.2-201ENST00000610220 349 ntBASIC-0.19□□□□□ -2.44
TRAV3A0A0B4J244 AC073534.2-201ENST00000620377 381 ntBASIC-0.19□□□□□ -2.44
TRAV3A0A0B4J244 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.2□□□□□ -2.44
TRAV3A0A0B4J244 SNORA32.1-201ENST00000364514 115 ntBASIC-0.2□□□□□ -2.44
TRAV3A0A0B4J244 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.2□□□□□ -2.44
TRAV3A0A0B4J244 RNU2-59P-201ENST00000410482 191 ntBASIC-0.2□□□□□ -2.44
TRAV3A0A0B4J244 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.2□□□□□ -2.44
TRAV3A0A0B4J244 AC073464.1-201ENST00000429823 534 ntBASIC-0.2□□□□□ -2.44
TRAV3A0A0B4J244 HMGN1P33-201ENST00000432945 451 ntBASIC-0.2□□□□□ -2.44
TRAV3A0A0B4J244 SEPT7P4-201ENST00000437076 306 ntBASIC-0.2□□□□□ -2.44
TRAV3A0A0B4J244 AL031667.1-201ENST00000440222 725 ntBASIC-0.2□□□□□ -2.44
TRAV3A0A0B4J244 snoU13.21-201ENST00000459368 105 ntBASIC-0.2□□□□□ -2.44
TRAV3A0A0B4J244 MTCO2P4-201ENST00000517968 247 ntBASIC-0.2□□□□□ -2.44
TRAV3A0A0B4J244 IGLVI-20-201ENST00000519296 130 ntBASIC-0.2□□□□□ -2.44
TRAV3A0A0B4J244 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-0.2□□□□□ -2.44
TRAV3A0A0B4J244 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.2□□□□□ -2.44
TRAV3A0A0B4J244 AC090897.1-201ENST00000580909 226 ntBASIC-0.2□□□□□ -2.44
TRAV3A0A0B4J244 MIR548AR-201ENST00000582191 57 ntBASIC-0.2□□□□□ -2.44
TRAV3A0A0B4J244 MIR4743-201ENST00000584576 69 ntBASIC-0.2□□□□□ -2.44
TRAV3A0A0B4J244 Pinc.1-201ENST00000616452 154 ntBASIC-0.2□□□□□ -2.44
TRAV3A0A0B4J244 AC104260.1-201ENST00000616660 539 ntBASIC-0.2□□□□□ -2.44
TRAV3A0A0B4J244 AC072046.2-201ENST00000618366 268 ntBASIC-0.2□□□□□ -2.44
TRAV3A0A0B4J244 MIR6759-201ENST00000638110 65 ntBASIC-0.2□□□□□ -2.44
TRAV3A0A0B4J244 RNU6-553P-201ENST00000364047 96 ntBASIC-0.21□□□□□ -2.44
TRAV3A0A0B4J244 Y_RNA.560-201ENST00000384689 102 ntBASIC-0.21□□□□□ -2.44
TRAV3A0A0B4J244 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.21□□□□□ -2.44
TRAV3A0A0B4J244 AL354751.2-201ENST00000415471 210 ntBASIC-0.21□□□□□ -2.44
TRAV3A0A0B4J244 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.21□□□□□ -2.44
TRAV3A0A0B4J244 HMGN2P32-201ENST00000444648 269 ntBASIC-0.21□□□□□ -2.44
TRAV3A0A0B4J244 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.21□□□□□ -2.44
TRAV3A0A0B4J244 SNORA40.12-201ENST00000516329 111 ntBASIC-0.21□□□□□ -2.44
TRAV3A0A0B4J244 SNORD45.4-201ENST00000516629 73 ntBASIC-0.21□□□□□ -2.44
TRAV3A0A0B4J244 MIR4676-201ENST00000583078 72 ntBASIC-0.21□□□□□ -2.44
TRAV3A0A0B4J244 AL357075.2-201ENST00000614906 189 ntBASIC-0.21□□□□□ -2.44
TRAV3A0A0B4J244 AL354950.2-201ENST00000617939 290 ntBASIC-0.21□□□□□ -2.44
TRAV3A0A0B4J244 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.22□□□□□ -2.44
TRAV3A0A0B4J244 SNORD114-5-201ENST00000362928 70 ntBASIC-0.22□□□□□ -2.44
TRAV3A0A0B4J244 SNORD114-31-201ENST00000363219 75 ntBASIC-0.22□□□□□ -2.44
TRAV3A0A0B4J244 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.22□□□□□ -2.44
TRAV3A0A0B4J244 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.22□□□□□ -2.44
TRAV3A0A0B4J244 RPL30P16-201ENST00000419341 429 ntBASIC-0.22□□□□□ -2.44
TRAV3A0A0B4J244 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.22□□□□□ -2.44
TRAV3A0A0B4J244 AC010486.3-201ENST00000511602 785 ntBASIC-0.22□□□□□ -2.44
TRAV3A0A0B4J244 RNU6-848P-201ENST00000515948 107 ntBASIC-0.22□□□□□ -2.44
TRAV3A0A0B4J244 RNU6-617P-201ENST00000516147 107 ntBASIC-0.22□□□□□ -2.44
TRAV3A0A0B4J244 RNU6-473P-201ENST00000516164 107 ntBASIC-0.22□□□□□ -2.44
TRAV3A0A0B4J244 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.22□□□□□ -2.44
TRAV3A0A0B4J244 RNU6-107P-201ENST00000516643 102 ntBASIC-0.22□□□□□ -2.44
TRAV3A0A0B4J244 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.22□□□□□ -2.44
TRAV3A0A0B4J244 SNORA9.1-201ENST00000362412 131 ntBASIC-0.23□□□□□ -2.45
TRAV3A0A0B4J244 RNU6-128P-201ENST00000383976 107 ntBASIC-0.23□□□□□ -2.45
TRAV3A0A0B4J244 SNORD28B-201ENST00000390993 75 ntBASIC-0.23□□□□□ -2.45
TRAV3A0A0B4J244 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.23□□□□□ -2.45
TRAV3A0A0B4J244 MTCO2P19-201ENST00000427513 598 ntBASIC-0.23□□□□□ -2.45
TRAV3A0A0B4J244 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.23□□□□□ -2.45
TRAV3A0A0B4J244 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.23□□□□□ -2.45
TRAV3A0A0B4J244 RNU7-187P-201ENST00000458985 68 ntBASIC-0.23□□□□□ -2.45
TRAV3A0A0B4J244 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.23□□□□□ -2.45
TRAV3A0A0B4J244 RNU6-830P-201ENST00000516353 107 ntBASIC-0.23□□□□□ -2.45
TRAV3A0A0B4J244 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.23□□□□□ -2.45
TRAV3A0A0B4J244 AC026371.1-201ENST00000551867 419 ntBASIC-0.23□□□□□ -2.45
TRAV3A0A0B4J244 AC012433.1-201ENST00000588916 398 ntBASIC-0.23□□□□□ -2.45
TRAV3A0A0B4J244 AC010525.2-201ENST00000590920 195 ntBASIC-0.23□□□□□ -2.45
TRAV3A0A0B4J244 AC020891.4-201ENST00000605745 93 ntBASIC-0.23□□□□□ -2.45
TRAV3A0A0B4J244 MIR1295B-201ENST00000636144 60 ntBASIC-0.23□□□□□ -2.45
TRAV3A0A0B4J244 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.23□□□□□ -2.45
TRAV3A0A0B4J244 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.24□□□□□ -2.45
TRAV3A0A0B4J244 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.24□□□□□ -2.45
TRAV3A0A0B4J244 RNU6-514P-201ENST00000384208 107 ntBASIC-0.24□□□□□ -2.45
TRAV3A0A0B4J244 MIR214-201ENST00000385214 110 ntBASIC-0.24□□□□□ -2.45
TRAV3A0A0B4J244 RNU6-584P-201ENST00000410350 95 ntBASIC-0.24□□□□□ -2.45
TRAV3A0A0B4J244 MTND2P18-201ENST00000419962 1030 ntBASIC-0.24□□□□□ -2.45
TRAV3A0A0B4J244 AC005042.3-201ENST00000453230 174 ntBASIC-0.24□□□□□ -2.45
TRAV3A0A0B4J244 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.24□□□□□ -2.45
TRAV3A0A0B4J244 RNA5SP268-201ENST00000516828 124 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms