Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 AC131280.1-202ENST00000624067 4211 ntBASIC2.12□□□□□ -2.07
PCDHAC2Q9Y5I4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.12□□□□□ -2.07
PCDHAC2Q9Y5I4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PCDHAC2Q9Y5I4 MIR410-201ENST00000362222 80 ntBASIC2.12□□□□□ -2.07
PCDHAC2Q9Y5I4 RNU6-682P-201ENST00000363843 106 ntBASIC2.12□□□□□ -2.07
PCDHAC2Q9Y5I4 SNORA25B-201ENST00000365507 128 ntBASIC2.12□□□□□ -2.07
PCDHAC2Q9Y5I4 SNORD58.1-201ENST00000391313 66 ntBASIC2.12□□□□□ -2.07
PCDHAC2Q9Y5I4 U3.40-201ENST00000408706 208 ntBASIC2.12□□□□□ -2.07
PCDHAC2Q9Y5I4 COX6CP10-201ENST00000416832 224 ntBASIC2.12□□□□□ -2.07
PCDHAC2Q9Y5I4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.12□□□□□ -2.07
PCDHAC2Q9Y5I4 UQCRBP2-201ENST00000447827 297 ntBASIC2.12□□□□□ -2.07
PCDHAC2Q9Y5I4 AC005840.1-201ENST00000498412 377 ntBASIC2.12□□□□□ -2.07
PCDHAC2Q9Y5I4 AC074133.1-201ENST00000515696 183 ntBASIC2.12□□□□□ -2.07
PCDHAC2Q9Y5I4 SNORA4.4-201ENST00000515921 135 ntBASIC2.12□□□□□ -2.07
PCDHAC2Q9Y5I4 RNY3P16-201ENST00000516338 101 ntBASIC2.12□□□□□ -2.07
PCDHAC2Q9Y5I4 RPL17P51-201ENST00000605218 238 ntBASIC2.12□□□□□ -2.07
PCDHAC2Q9Y5I4 AC091932.3-201ENST00000624223 323 ntBASIC2.12□□□□□ -2.07
PCDHAC2Q9Y5I4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
PCDHAC2Q9Y5I4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PCDHAC2Q9Y5I4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PCDHAC2Q9Y5I4 Y_RNA.29-201ENST00000362570 113 ntBASIC2.11□□□□□ -2.07
PCDHAC2Q9Y5I4 RNY1-201ENST00000364228 113 ntBASIC2.11□□□□□ -2.07
PCDHAC2Q9Y5I4 Y_RNA.270-201ENST00000364693 104 ntBASIC2.11□□□□□ -2.07
PCDHAC2Q9Y5I4 RNU6-1175P-201ENST00000365200 107 ntBASIC2.11□□□□□ -2.07
PCDHAC2Q9Y5I4 Y_RNA.418-201ENST00000384029 102 ntBASIC2.11□□□□□ -2.07
PCDHAC2Q9Y5I4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.11□□□□□ -2.07
PCDHAC2Q9Y5I4 HMGN2P38-201ENST00000423806 265 ntBASIC2.11□□□□□ -2.07
PCDHAC2Q9Y5I4 RNU6-625P-201ENST00000459412 107 ntBASIC2.11□□□□□ -2.07
PCDHAC2Q9Y5I4 AC018868.1-201ENST00000491307 315 ntBASIC2.11□□□□□ -2.07
PCDHAC2Q9Y5I4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.11□□□□□ -2.07
PCDHAC2Q9Y5I4 RNU6-861P-201ENST00000516745 106 ntBASIC2.11□□□□□ -2.07
PCDHAC2Q9Y5I4 RNA5SP490-201ENST00000517141 136 ntBASIC2.11□□□□□ -2.07
PCDHAC2Q9Y5I4 MTND5P41-201ENST00000517498 206 ntBASIC2.11□□□□□ -2.07
PCDHAC2Q9Y5I4 AC024405.2-202ENST00000532731 184 ntBASIC2.11□□□□□ -2.07
PCDHAC2Q9Y5I4 CYCSP26-201ENST00000534107 320 ntBASIC2.11□□□□□ -2.07
PCDHAC2Q9Y5I4 AC022441.3-201ENST00000605737 136 ntBASIC2.11□□□□□ -2.07
PCDHAC2Q9Y5I4 U4atac.1-201ENST00000618345 95 ntBASIC2.11□□□□□ -2.07
PCDHAC2Q9Y5I4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.11□□□□□ -2.07
PCDHAC2Q9Y5I4 AC068205.3-201ENST00000636385 468 ntBASIC2.11□□□□□ -2.07
PCDHAC2Q9Y5I4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PCDHAC2Q9Y5I4 MIR335-201ENST00000362173 94 ntBASIC2.1□□□□□ -2.07
PCDHAC2Q9Y5I4 Y_RNA.478-201ENST00000384358 107 ntBASIC2.1□□□□□ -2.07
PCDHAC2Q9Y5I4 MIR548B-201ENST00000385247 97 ntBASIC2.1□□□□□ -2.07
PCDHAC2Q9Y5I4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
PCDHAC2Q9Y5I4 AL357139.1-201ENST00000407792 426 ntBASIC2.1□□□□□ -2.07
PCDHAC2Q9Y5I4 MIR1298-201ENST00000408783 112 ntBASIC2.1□□□□□ -2.07
PCDHAC2Q9Y5I4 HMGN2P18-201ENST00000450680 270 ntBASIC2.1□□□□□ -2.07
PCDHAC2Q9Y5I4 HMGN2P9-201ENST00000476875 229 ntBASIC2.1□□□□□ -2.07
PCDHAC2Q9Y5I4 RPS27P21-201ENST00000486977 252 ntBASIC2.1□□□□□ -2.07
PCDHAC2Q9Y5I4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.1□□□□□ -2.07
PCDHAC2Q9Y5I4 CBX3P4-201ENST00000538909 354 ntBASIC2.1□□□□□ -2.07
PCDHAC2Q9Y5I4 SNORD14A-201ENST00000606526 91 ntBASIC2.1□□□□□ -2.07
PCDHAC2Q9Y5I4 SNORD11B-201ENST00000607707 90 ntBASIC2.1□□□□□ -2.07
PCDHAC2Q9Y5I4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.1□□□□□ -2.07
PCDHAC2Q9Y5I4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
PCDHAC2Q9Y5I4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
PCDHAC2Q9Y5I4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 MIR340-201ENST00000362125 95 ntBASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 RNU6-545P-201ENST00000362681 104 ntBASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 Y_RNA.200-201ENST00000364018 102 ntBASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 Y_RNA.230-201ENST00000364348 109 ntBASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 RNU6-1305P-201ENST00000364353 104 ntBASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 RNU6-740P-201ENST00000364734 105 ntBASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 RNU6-818P-201ENST00000364837 108 ntBASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 RNU6-290P-201ENST00000365212 101 ntBASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 RNU6-746P-201ENST00000384112 109 ntBASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 SNORD23.1-201ENST00000408212 104 ntBASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 Y_RNA.644-201ENST00000459006 113 ntBASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 SERF1AP1-201ENST00000514575 187 ntBASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 Y_RNA.674-201ENST00000516362 113 ntBASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 RNU6-107P-201ENST00000516643 102 ntBASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 RNU2-12P-201ENST00000517216 168 ntBASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 MIR3126-201ENST00000577443 74 ntBASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 AC005176.2-201ENST00000596933 147 ntBASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 AC011921.3-201ENST00000605540 361 ntBASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 AC004467.1-201ENST00000615678 330 ntBASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 AL590240.4-201ENST00000616908 390 ntBASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 MIR7111-201ENST00000619751 72 ntBASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
PCDHAC2Q9Y5I4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
PCDHAC2Q9Y5I4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
PCDHAC2Q9Y5I4 Y_RNA.83-201ENST00000363005 113 ntBASIC2.08□□□□□ -2.08
PCDHAC2Q9Y5I4 Y_RNA.170-201ENST00000363746 110 ntBASIC2.08□□□□□ -2.08
PCDHAC2Q9Y5I4 SNORA3A-201ENST00000364113 130 ntBASIC2.08□□□□□ -2.08
PCDHAC2Q9Y5I4 SNORA16.1-201ENST00000364597 132 ntBASIC2.08□□□□□ -2.08
PCDHAC2Q9Y5I4 RNA5SP138-201ENST00000365098 114 ntBASIC2.08□□□□□ -2.08
PCDHAC2Q9Y5I4 Y_RNA.352-201ENST00000365439 102 ntBASIC2.08□□□□□ -2.08
PCDHAC2Q9Y5I4 RNU4-52P-201ENST00000384209 138 ntBASIC2.08□□□□□ -2.08
PCDHAC2Q9Y5I4 MIR1287-201ENST00000408492 90 ntBASIC2.08□□□□□ -2.08
PCDHAC2Q9Y5I4 MIR548H3-201ENST00000408771 118 ntBASIC2.08□□□□□ -2.08
PCDHAC2Q9Y5I4 MRPS10P1-201ENST00000448483 130 ntBASIC2.08□□□□□ -2.08
PCDHAC2Q9Y5I4 RNU6-789P-201ENST00000517105 102 ntBASIC2.08□□□□□ -2.08
PCDHAC2Q9Y5I4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.08□□□□□ -2.08
PCDHAC2Q9Y5I4 MIR4448-201ENST00000584360 86 ntBASIC2.08□□□□□ -2.08
PCDHAC2Q9Y5I4 MIR4753-201ENST00000585119 83 ntBASIC2.08□□□□□ -2.08
PCDHAC2Q9Y5I4 AL645939.4-201ENST00000604495 135 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms