Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 AC100821.1-201ENST00000523153 2479 ntBASIC2.65□□□□□ -1.99
PCDHA9Q9Y5H5 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.65□□□□□ -1.99
PCDHA9Q9Y5H5 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PCDHA9Q9Y5H5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.64□□□□□ -1.99
PCDHA9Q9Y5H5 RNU6-862P-201ENST00000362804 105 ntBASIC2.64□□□□□ -1.99
PCDHA9Q9Y5H5 MIR1278-201ENST00000408753 81 ntBASIC2.64□□□□□ -1.99
PCDHA9Q9Y5H5 RNU7-94P-201ENST00000459576 63 ntBASIC2.64□□□□□ -1.99
PCDHA9Q9Y5H5 RNU6-1096P-201ENST00000517089 102 ntBASIC2.64□□□□□ -1.99
PCDHA9Q9Y5H5 ZNF861P-201ENST00000588126 639 ntBASIC2.64□□□□□ -1.99
PCDHA9Q9Y5H5 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 AC018630.2-201ENST00000534866 2403 ntBASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 SNORD115-3-201ENST00000363100 82 ntBASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 Y_RNA.203-201ENST00000364106 102 ntBASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 RNA5SP323-201ENST00000391094 133 ntBASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 RNU6-1135P-201ENST00000411083 103 ntBASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 RN7SKP101-201ENST00000411376 320 ntBASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 AC091021.1-201ENST00000468051 388 ntBASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 RNU6-453P-201ENST00000516819 85 ntBASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 RNU6-826P-201ENST00000516827 104 ntBASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 RNU6-255P-201ENST00000516957 105 ntBASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 RNU6-341P-201ENST00000516973 96 ntBASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 AL358944.1-201ENST00000528537 144 ntBASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 AL929325.1-201ENST00000603096 117 ntBASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 MIR6079-201ENST00000635807 62 ntBASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 ZNF271P-202ENST00000465539 1970 ntBASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PCDHA9Q9Y5H5 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.62□□□□□ -1.99
PCDHA9Q9Y5H5 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PCDHA9Q9Y5H5 RNU4-41P-201ENST00000364426 143 ntBASIC2.62□□□□□ -1.99
PCDHA9Q9Y5H5 RNU6-746P-201ENST00000384112 109 ntBASIC2.62□□□□□ -1.99
PCDHA9Q9Y5H5 SNORA8-201ENST00000384574 139 ntBASIC2.62□□□□□ -1.99
PCDHA9Q9Y5H5 MIR128-1-201ENST00000384921 82 ntBASIC2.62□□□□□ -1.99
PCDHA9Q9Y5H5 SNORA48.2-201ENST00000390926 124 ntBASIC2.62□□□□□ -1.99
PCDHA9Q9Y5H5 SNORA11.1-201ENST00000408133 129 ntBASIC2.62□□□□□ -1.99
PCDHA9Q9Y5H5 SNORA11.4-201ENST00000408823 129 ntBASIC2.62□□□□□ -1.99
PCDHA9Q9Y5H5 AC099677.2-201ENST00000436385 175 ntBASIC2.62□□□□□ -1.99
PCDHA9Q9Y5H5 AC245047.8-201ENST00000456455 284 ntBASIC2.62□□□□□ -1.99
PCDHA9Q9Y5H5 RNU6-1007P-201ENST00000516586 107 ntBASIC2.62□□□□□ -1.99
PCDHA9Q9Y5H5 AC109810.1-201ENST00000534066 224 ntBASIC2.62□□□□□ -1.99
PCDHA9Q9Y5H5 MIR3200-201ENST00000580767 85 ntBASIC2.62□□□□□ -1.99
PCDHA9Q9Y5H5 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.62□□□□□ -1.99
PCDHA9Q9Y5H5 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.62□□□□□ -1.99
PCDHA9Q9Y5H5 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 AC009487.2-201ENST00000420969 6821 ntBASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 SNORA25.6-201ENST00000364121 118 ntBASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 Y_RNA.357-201ENST00000365487 109 ntBASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 RNU1-109P-201ENST00000383960 147 ntBASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 AL606845.1-201ENST00000404881 255 ntBASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 AL135938.1-201ENST00000443141 297 ntBASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 AL163195.1-201ENST00000496941 348 ntBASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 AC004486.1-201ENST00000546846 233 ntBASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 MIR3144-201ENST00000579460 79 ntBASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 MIR4431-201ENST00000579990 94 ntBASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 MIR3670-2-201ENST00000582974 65 ntBASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 MIR3670-1-201ENST00000584160 65 ntBASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 MIR3670-3-201ENST00000584855 65 ntBASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 AL021707.8-201ENST00000609428 183 ntBASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 MIR3670-4-201ENST00000612260 65 ntBASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 AC022513.1-201ENST00000624512 117 ntBASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
PCDHA9Q9Y5H5 AP006437.1-201ENST00000641440 3685 ntBASIC2.6□□□□□ -1.99
PCDHA9Q9Y5H5 SNORA33-201ENST00000363664 130 ntBASIC2.6□□□□□ -1.99
PCDHA9Q9Y5H5 Y_RNA.580-201ENST00000391004 95 ntBASIC2.6□□□□□ -1.99
PCDHA9Q9Y5H5 RNU5E-9P-201ENST00000411164 104 ntBASIC2.6□□□□□ -1.99
PCDHA9Q9Y5H5 BX510359.4-201ENST00000423750 193 ntBASIC2.6□□□□□ -1.99
PCDHA9Q9Y5H5 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.6□□□□□ -1.99
PCDHA9Q9Y5H5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDHA9Q9Y5H5 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.6□□□□□ -1.99
PCDHA9Q9Y5H5 SNORA74D-201ENST00000516404 141 ntBASIC2.6□□□□□ -1.99
PCDHA9Q9Y5H5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.6□□□□□ -1.99
PCDHA9Q9Y5H5 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.6□□□□□ -1.99
PCDHA9Q9Y5H5 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.6□□□□□ -1.99
PCDHA9Q9Y5H5 RNU4-84P-201ENST00000364200 139 ntBASIC2.59□□□□□ -1.99
PCDHA9Q9Y5H5 Y_RNA.272-201ENST00000364696 102 ntBASIC2.59□□□□□ -1.99
PCDHA9Q9Y5H5 RNU6-728P-201ENST00000365375 104 ntBASIC2.59□□□□□ -1.99
PCDHA9Q9Y5H5 MT-TT-201ENST00000387460 66 ntBASIC2.59□□□□□ -1.99
PCDHA9Q9Y5H5 RNA5SP465-201ENST00000391195 109 ntBASIC2.59□□□□□ -1.99
PCDHA9Q9Y5H5 AL138827.1-201ENST00000402666 306 ntBASIC2.59□□□□□ -1.99
PCDHA9Q9Y5H5 AC087499.2-201ENST00000432861 149 ntBASIC2.59□□□□□ -1.99
PCDHA9Q9Y5H5 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.59□□□□□ -1.99
PCDHA9Q9Y5H5 AC021753.1-201ENST00000635724 168 ntBASIC2.59□□□□□ -1.99
PCDHA9Q9Y5H5 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PCDHA9Q9Y5H5 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.58□□□□□ -2
PCDHA9Q9Y5H5 VTRNA1-1-201ENST00000363120 99 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms