Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.32□□□□□ -2.62
AP4S1Q9Y587 AC073343.1-201ENST00000328239 651 ntBASIC-1.33□□□□□ -2.62
AP4S1Q9Y587 SNORA1-201ENST00000384107 130 ntBASIC-1.33□□□□□ -2.62
AP4S1Q9Y587 RNU6-207P-201ENST00000384137 107 ntBASIC-1.33□□□□□ -2.62
AP4S1Q9Y587 SNORA51.10-201ENST00000384418 136 ntBASIC-1.33□□□□□ -2.62
AP4S1Q9Y587 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-1.33□□□□□ -2.62
AP4S1Q9Y587 SPINT5P-201ENST00000448174 155 ntBASIC-1.33□□□□□ -2.62
AP4S1Q9Y587 SCARNA18-201ENST00000459004 134 ntBASIC-1.33□□□□□ -2.62
AP4S1Q9Y587 RNU7-51P-201ENST00000516560 62 ntBASIC-1.33□□□□□ -2.62
AP4S1Q9Y587 RNU6-881P-201ENST00000516813 102 ntBASIC-1.33□□□□□ -2.62
AP4S1Q9Y587 AC105029.1-201ENST00000520250 669 ntBASIC-1.33□□□□□ -2.62
AP4S1Q9Y587 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-1.33□□□□□ -2.62
AP4S1Q9Y587 AC107934.1-201ENST00000522215 217 ntBASIC-1.33□□□□□ -2.62
AP4S1Q9Y587 AC123904.2-201ENST00000548059 300 ntBASIC-1.33□□□□□ -2.62
AP4S1Q9Y587 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.33□□□□□ -2.62
AP4S1Q9Y587 AC087685.1-201ENST00000587507 141 ntBASIC-1.33□□□□□ -2.62
AP4S1Q9Y587 AC069431.2-201ENST00000604149 1099 ntBASIC-1.33□□□□□ -2.62
AP4S1Q9Y587 AC022306.2-201ENST00000617563 647 ntBASIC-1.33□□□□□ -2.62
AP4S1Q9Y587 AC068880.4-201ENST00000623082 495 ntBASIC-1.33□□□□□ -2.62
AP4S1Q9Y587 AC093726.3-201ENST00000637588 150 ntBASIC-1.33□□□□□ -2.62
AP4S1Q9Y587 RNA5SP368-201ENST00000364298 116 ntBASIC-1.34□□□□□ -2.62
AP4S1Q9Y587 RNU6-47P-201ENST00000383866 107 ntBASIC-1.34□□□□□ -2.62
AP4S1Q9Y587 SNORA22B-201ENST00000383876 138 ntBASIC-1.34□□□□□ -2.62
AP4S1Q9Y587 Y_RNA.466-201ENST00000384294 113 ntBASIC-1.34□□□□□ -2.62
AP4S1Q9Y587 RNU6-376P-201ENST00000384731 106 ntBASIC-1.34□□□□□ -2.62
AP4S1Q9Y587 ZNF736P7Y-201ENST00000425158 820 ntBASIC-1.34□□□□□ -2.62
AP4S1Q9Y587 MTCO2P11-201ENST00000431069 680 ntBASIC-1.34□□□□□ -2.62
AP4S1Q9Y587 SNRPGP10-201ENST00000432323 225 ntBASIC-1.34□□□□□ -2.62
AP4S1Q9Y587 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.34□□□□□ -2.62
AP4S1Q9Y587 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.34□□□□□ -2.62
AP4S1Q9Y587 AL157687.1-201ENST00000554853 619 ntBASIC-1.34□□□□□ -2.62
AP4S1Q9Y587 SNORD11B-201ENST00000607707 90 ntBASIC-1.34□□□□□ -2.62
AP4S1Q9Y587 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.35□□□□□ -2.63
AP4S1Q9Y587 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.35□□□□□ -2.63
AP4S1Q9Y587 RNU6-609P-201ENST00000365459 107 ntBASIC-1.35□□□□□ -2.63
AP4S1Q9Y587 AC092447.3-201ENST00000426027 686 ntBASIC-1.35□□□□□ -2.63
AP4S1Q9Y587 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.35□□□□□ -2.63
AP4S1Q9Y587 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.35□□□□□ -2.63
AP4S1Q9Y587 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-1.35□□□□□ -2.63
AP4S1Q9Y587 AC010598.1-201ENST00000510378 103 ntBASIC-1.35□□□□□ -2.63
AP4S1Q9Y587 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.35□□□□□ -2.63
AP4S1Q9Y587 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.35□□□□□ -2.63
AP4S1Q9Y587 MTND1P5-201ENST00000517906 940 ntBASIC-1.35□□□□□ -2.63
AP4S1Q9Y587 AC006441.5-201ENST00000612680 209 ntBASIC-1.35□□□□□ -2.63
AP4S1Q9Y587 AC010205.1-201ENST00000616668 449 ntBASIC-1.35□□□□□ -2.63
AP4S1Q9Y587 AC005609.4-201ENST00000625071 447 ntBASIC-1.35□□□□□ -2.63
AP4S1Q9Y587 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.36□□□□□ -2.63
AP4S1Q9Y587 SNORA63C-201ENST00000364578 129 ntBASIC-1.36□□□□□ -2.63
AP4S1Q9Y587 RNU6-740P-201ENST00000364734 105 ntBASIC-1.36□□□□□ -2.63
AP4S1Q9Y587 RNU6-621P-201ENST00000364752 109 ntBASIC-1.36□□□□□ -2.63
AP4S1Q9Y587 RNU6-354P-201ENST00000383862 107 ntBASIC-1.36□□□□□ -2.63
AP4S1Q9Y587 RNU6-610P-201ENST00000384264 107 ntBASIC-1.36□□□□□ -2.63
AP4S1Q9Y587 RNU6-883P-201ENST00000384597 107 ntBASIC-1.36□□□□□ -2.63
AP4S1Q9Y587 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.36□□□□□ -2.63
AP4S1Q9Y587 MIR487A-201ENST00000385009 80 ntBASIC-1.36□□□□□ -2.63
AP4S1Q9Y587 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.36□□□□□ -2.63
AP4S1Q9Y587 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.36□□□□□ -2.63
AP4S1Q9Y587 SCARNA17-201ENST00000516183 144 ntBASIC-1.36□□□□□ -2.63
AP4S1Q9Y587 SNORA27.4-201ENST00000516650 95 ntBASIC-1.36□□□□□ -2.63
AP4S1Q9Y587 AL121992.2-201ENST00000606262 256 ntBASIC-1.36□□□□□ -2.63
AP4S1Q9Y587 RNU6-462P-201ENST00000362659 105 ntBASIC-1.37□□□□□ -2.63
AP4S1Q9Y587 Y_RNA.46-201ENST00000362695 102 ntBASIC-1.37□□□□□ -2.63
AP4S1Q9Y587 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.37□□□□□ -2.63
AP4S1Q9Y587 MIR518F-201ENST00000384973 87 ntBASIC-1.37□□□□□ -2.63
AP4S1Q9Y587 RNA5SP494-201ENST00000410653 129 ntBASIC-1.37□□□□□ -2.63
AP4S1Q9Y587 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-1.37□□□□□ -2.63
AP4S1Q9Y587 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.37□□□□□ -2.63
AP4S1Q9Y587 AL138752.1-201ENST00000452964 351 ntBASIC-1.37□□□□□ -2.63
AP4S1Q9Y587 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.37□□□□□ -2.63
AP4S1Q9Y587 AC093303.1-201ENST00000514549 295 ntBASIC-1.37□□□□□ -2.63
AP4S1Q9Y587 AC021146.6-201ENST00000514659 117 ntBASIC-1.37□□□□□ -2.63
AP4S1Q9Y587 RNU6-475P-201ENST00000516073 104 ntBASIC-1.37□□□□□ -2.63
AP4S1Q9Y587 SNORD45.4-201ENST00000516629 73 ntBASIC-1.37□□□□□ -2.63
AP4S1Q9Y587 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.37□□□□□ -2.63
AP4S1Q9Y587 AC026741.1-201ENST00000605892 482 ntBASIC-1.37□□□□□ -2.63
AP4S1Q9Y587 AC091965.4-201ENST00000607691 587 ntBASIC-1.37□□□□□ -2.63
AP4S1Q9Y587 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.38□□□□□ -2.63
AP4S1Q9Y587 RNU6-236P-201ENST00000363886 106 ntBASIC-1.38□□□□□ -2.63
AP4S1Q9Y587 RNU4-36P-201ENST00000364294 144 ntBASIC-1.38□□□□□ -2.63
AP4S1Q9Y587 RNU6-726P-201ENST00000364680 107 ntBASIC-1.38□□□□□ -2.63
AP4S1Q9Y587 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.38□□□□□ -2.63
AP4S1Q9Y587 RNU6-61P-201ENST00000365528 109 ntBASIC-1.38□□□□□ -2.63
AP4S1Q9Y587 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.38□□□□□ -2.63
AP4S1Q9Y587 SNORA75.4-201ENST00000391278 119 ntBASIC-1.38□□□□□ -2.63
AP4S1Q9Y587 AC116353.2-201ENST00000505332 712 ntBASIC-1.38□□□□□ -2.63
AP4S1Q9Y587 RNU6-138P-201ENST00000515952 107 ntBASIC-1.38□□□□□ -2.63
AP4S1Q9Y587 RNU6-685P-201ENST00000517088 95 ntBASIC-1.38□□□□□ -2.63
AP4S1Q9Y587 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.38□□□□□ -2.63
AP4S1Q9Y587 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.38□□□□□ -2.63
AP4S1Q9Y587 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-1.38□□□□□ -2.63
AP4S1Q9Y587 AGGF1P4-201ENST00000568249 801 ntBASIC-1.38□□□□□ -2.63
AP4S1Q9Y587 MIR4791-201ENST00000607666 84 ntBASIC-1.38□□□□□ -2.63
AP4S1Q9Y587 AC022960.3-201ENST00000619794 441 ntBASIC-1.38□□□□□ -2.63
AP4S1Q9Y587 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.38□□□□□ -2.63
AP4S1Q9Y587 RNU6-490P-201ENST00000362985 107 ntBASIC-1.39□□□□□ -2.63
AP4S1Q9Y587 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.39□□□□□ -2.63
AP4S1Q9Y587 MTCO2P8-201ENST00000412213 658 ntBASIC-1.39□□□□□ -2.63
AP4S1Q9Y587 AC108059.2-201ENST00000434626 151 ntBASIC-1.39□□□□□ -2.63
AP4S1Q9Y587 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.39□□□□□ -2.63
AP4S1Q9Y587 RNA5SP216-201ENST00000516111 123 ntBASIC-1.39□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms