Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 Y_RNA.303-201ENST00000364998 94 ntBASIC2.5□□□□□ -2.01
SHROOM4Q9ULL8 RNU6-338P-201ENST00000383888 105 ntBASIC2.5□□□□□ -2.01
SHROOM4Q9ULL8 MTCO3P19-201ENST00000415864 321 ntBASIC2.5□□□□□ -2.01
SHROOM4Q9ULL8 AC010154.1-201ENST00000425857 269 ntBASIC2.5□□□□□ -2.01
SHROOM4Q9ULL8 AC079140.2-201ENST00000506193 142 ntBASIC2.5□□□□□ -2.01
SHROOM4Q9ULL8 RNU6-408P-201ENST00000515910 100 ntBASIC2.5□□□□□ -2.01
SHROOM4Q9ULL8 RNA5SP20-201ENST00000515976 84 ntBASIC2.5□□□□□ -2.01
SHROOM4Q9ULL8 AL355375.2-201ENST00000574825 175 ntBASIC2.5□□□□□ -2.01
SHROOM4Q9ULL8 AL162424.1-201ENST00000602325 221 ntBASIC2.5□□□□□ -2.01
SHROOM4Q9ULL8 MIR8063-201ENST00000621930 81 ntBASIC2.5□□□□□ -2.01
SHROOM4Q9ULL8 SNORA4.2-201ENST00000365313 147 ntBASIC2.49□□□□□ -2.01
SHROOM4Q9ULL8 RNY4P36-201ENST00000391116 96 ntBASIC2.49□□□□□ -2.01
SHROOM4Q9ULL8 AC005002.2-201ENST00000438228 269 ntBASIC2.49□□□□□ -2.01
SHROOM4Q9ULL8 RNU6-911P-201ENST00000516523 104 ntBASIC2.49□□□□□ -2.01
SHROOM4Q9ULL8 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.49□□□□□ -2.01
SHROOM4Q9ULL8 Y_RNA.263-201ENST00000364659 114 ntBASIC2.48□□□□□ -2.01
SHROOM4Q9ULL8 RNU6-440P-201ENST00000390882 105 ntBASIC2.48□□□□□ -2.01
SHROOM4Q9ULL8 MRPL42P3-201ENST00000401492 326 ntBASIC2.48□□□□□ -2.01
SHROOM4Q9ULL8 AL355796.1-201ENST00000406706 323 ntBASIC2.48□□□□□ -2.01
SHROOM4Q9ULL8 RAB28P5-201ENST00000427490 651 ntBASIC2.48□□□□□ -2.01
SHROOM4Q9ULL8 MRPS10P1-201ENST00000448483 130 ntBASIC2.48□□□□□ -2.01
SHROOM4Q9ULL8 SUMO1P2-201ENST00000452524 304 ntBASIC2.48□□□□□ -2.01
SHROOM4Q9ULL8 RNU7-34P-201ENST00000459394 64 ntBASIC2.48□□□□□ -2.01
SHROOM4Q9ULL8 AL442163.3-201ENST00000554110 156 ntBASIC2.48□□□□□ -2.01
SHROOM4Q9ULL8 MIR8054-201ENST00000620877 86 ntBASIC2.48□□□□□ -2.01
SHROOM4Q9ULL8 Y_RNA.356-201ENST00000365475 113 ntBASIC2.47□□□□□ -2.01
SHROOM4Q9ULL8 RNU6-203P-201ENST00000384038 104 ntBASIC2.47□□□□□ -2.01
SHROOM4Q9ULL8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.47□□□□□ -2.01
SHROOM4Q9ULL8 Y_RNA.702-201ENST00000516843 96 ntBASIC2.47□□□□□ -2.01
SHROOM4Q9ULL8 RNU7-172P-201ENST00000517125 64 ntBASIC2.47□□□□□ -2.01
SHROOM4Q9ULL8 AC068338.1-201ENST00000565567 176 ntBASIC2.47□□□□□ -2.01
SHROOM4Q9ULL8 MIR3122-201ENST00000577243 73 ntBASIC2.47□□□□□ -2.01
SHROOM4Q9ULL8 AC006380.1-201ENST00000603598 186 ntBASIC2.47□□□□□ -2.01
SHROOM4Q9ULL8 U6.115-201ENST00000636045 103 ntBASIC2.47□□□□□ -2.01
SHROOM4Q9ULL8 RNU4-42P-201ENST00000364738 142 ntBASIC2.46□□□□□ -2.02
SHROOM4Q9ULL8 RNU6-407P-201ENST00000365280 104 ntBASIC2.46□□□□□ -2.02
SHROOM4Q9ULL8 Y_RNA.428-201ENST00000384078 102 ntBASIC2.46□□□□□ -2.02
SHROOM4Q9ULL8 MIR562-201ENST00000384894 95 ntBASIC2.46□□□□□ -2.02
SHROOM4Q9ULL8 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.46□□□□□ -2.02
SHROOM4Q9ULL8 AC245047.3-201ENST00000429428 127 ntBASIC2.46□□□□□ -2.02
SHROOM4Q9ULL8 FCF1P4-201ENST00000448326 183 ntBASIC2.46□□□□□ -2.02
SHROOM4Q9ULL8 Y_RNA.632-201ENST00000459189 102 ntBASIC2.46□□□□□ -2.02
SHROOM4Q9ULL8 AC105758.1-201ENST00000506038 399 ntBASIC2.46□□□□□ -2.02
SHROOM4Q9ULL8 RNU6-699P-201ENST00000517081 110 ntBASIC2.46□□□□□ -2.02
SHROOM4Q9ULL8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.46□□□□□ -2.02
SHROOM4Q9ULL8 AL929325.1-201ENST00000603096 117 ntBASIC2.46□□□□□ -2.02
SHROOM4Q9ULL8 AC022217.4-201ENST00000604389 163 ntBASIC2.46□□□□□ -2.02
SHROOM4Q9ULL8 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.46□□□□□ -2.02
SHROOM4Q9ULL8 AC018630.2-201ENST00000534866 2403 ntBASIC2.46□□□□□ -2.02
SHROOM4Q9ULL8 AP000648.3-201ENST00000623539 4507 ntBASIC2.46□□□□□ -2.02
SHROOM4Q9ULL8 RNY3P4-201ENST00000384428 101 ntBASIC2.45□□□□□ -2.02
SHROOM4Q9ULL8 SNORD116-29-201ENST00000384516 83 ntBASIC2.45□□□□□ -2.02
SHROOM4Q9ULL8 MIR194-1-201ENST00000384892 85 ntBASIC2.45□□□□□ -2.02
SHROOM4Q9ULL8 RPS27P1-201ENST00000450552 247 ntBASIC2.45□□□□□ -2.02
SHROOM4Q9ULL8 RNU6-1040P-201ENST00000383974 107 ntBASIC2.45□□□□□ -2.02
SHROOM4Q9ULL8 Y_RNA.529-201ENST00000384586 119 ntBASIC2.45□□□□□ -2.02
SHROOM4Q9ULL8 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.45□□□□□ -2.02
SHROOM4Q9ULL8 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.45□□□□□ -2.02
SHROOM4Q9ULL8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.45□□□□□ -2.02
SHROOM4Q9ULL8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.45□□□□□ -2.02
SHROOM4Q9ULL8 AC004467.1-201ENST00000615678 330 ntBASIC2.45□□□□□ -2.02
SHROOM4Q9ULL8 U2.1-201ENST00000618978 145 ntBASIC2.45□□□□□ -2.02
SHROOM4Q9ULL8 SNORD114-7-201ENST00000362520 77 ntBASIC2.44□□□□□ -2.02
SHROOM4Q9ULL8 SNORA27.1-201ENST00000362604 124 ntBASIC2.44□□□□□ -2.02
SHROOM4Q9ULL8 SNORD114-27-201ENST00000363766 70 ntBASIC2.44□□□□□ -2.02
SHROOM4Q9ULL8 MIR628-201ENST00000385229 95 ntBASIC2.44□□□□□ -2.02
SHROOM4Q9ULL8 AL161935.2-201ENST00000414627 60 ntBASIC2.44□□□□□ -2.02
SHROOM4Q9ULL8 AL606517.2-201ENST00000442855 241 ntBASIC2.44□□□□□ -2.02
SHROOM4Q9ULL8 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.44□□□□□ -2.02
SHROOM4Q9ULL8 AC097462.1-201ENST00000514125 324 ntBASIC2.44□□□□□ -2.02
SHROOM4Q9ULL8 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.44□□□□□ -2.02
SHROOM4Q9ULL8 AP001094.1-201ENST00000579805 193 ntBASIC2.44□□□□□ -2.02
SHROOM4Q9ULL8 AL034345.1-201ENST00000407768 123 ntBASIC2.43□□□□□ -2.02
SHROOM4Q9ULL8 PGBD4P5-201ENST00000445958 426 ntBASIC2.43□□□□□ -2.02
SHROOM4Q9ULL8 RNU6-454P-201ENST00000364292 107 ntBASIC2.42□□□□□ -2.02
SHROOM4Q9ULL8 RNU6-1031P-201ENST00000384773 107 ntBASIC2.42□□□□□ -2.02
SHROOM4Q9ULL8 RPS26P55-201ENST00000471178 356 ntBASIC2.42□□□□□ -2.02
SHROOM4Q9ULL8 RNU7-128P-201ENST00000517247 62 ntBASIC2.42□□□□□ -2.02
SHROOM4Q9ULL8 AC008133.2-201ENST00000624540 351 ntBASIC2.42□□□□□ -2.02
SHROOM4Q9ULL8 RNU6-1123P-201ENST00000362347 106 ntBASIC2.41□□□□□ -2.02
SHROOM4Q9ULL8 Y_RNA.243-201ENST00000364481 109 ntBASIC2.41□□□□□ -2.02
SHROOM4Q9ULL8 RNU1-133P-201ENST00000364867 167 ntBASIC2.41□□□□□ -2.02
SHROOM4Q9ULL8 MIR559-201ENST00000385188 96 ntBASIC2.41□□□□□ -2.02
SHROOM4Q9ULL8 AL117351.2-201ENST00000513571 157 ntBASIC2.41□□□□□ -2.02
SHROOM4Q9ULL8 RNU6-507P-201ENST00000516045 100 ntBASIC2.41□□□□□ -2.02
SHROOM4Q9ULL8 RNU6-1278P-201ENST00000516130 107 ntBASIC2.41□□□□□ -2.02
SHROOM4Q9ULL8 SNORD116.3-201ENST00000517176 78 ntBASIC2.41□□□□□ -2.02
SHROOM4Q9ULL8 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.41□□□□□ -2.02
SHROOM4Q9ULL8 SNORA28-201ENST00000606769 126 ntBASIC2.41□□□□□ -2.02
SHROOM4Q9ULL8 AC127459.3-201ENST00000624328 466 ntBASIC2.41□□□□□ -2.02
SHROOM4Q9ULL8 RNY3P14-201ENST00000384309 102 ntBASIC2.4□□□□□ -2.02
SHROOM4Q9ULL8 RNU6-902P-201ENST00000517212 91 ntBASIC2.4□□□□□ -2.02
SHROOM4Q9ULL8 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.4□□□□□ -2.02
SHROOM4Q9ULL8 VN1R91P-201ENST00000594377 169 ntBASIC2.4□□□□□ -2.02
SHROOM4Q9ULL8 AC073413.2-201ENST00000604332 360 ntBASIC2.4□□□□□ -2.02
SHROOM4Q9ULL8 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.4□□□□□ -2.02
SHROOM4Q9ULL8 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
SHROOM4Q9ULL8 Y_RNA.30-201ENST00000362572 97 ntBASIC2.39□□□□□ -2.03
SHROOM4Q9ULL8 RNU6-626P-201ENST00000363354 107 ntBASIC2.39□□□□□ -2.03
SHROOM4Q9ULL8 RNU6-926P-201ENST00000384075 107 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms