Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.71□□□□□ -2.3
NUP50Q9UKX7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.71□□□□□ -2.3
NUP50Q9UKX7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.71□□□□□ -2.3
NUP50Q9UKX7 RNU1-54P-201ENST00000517181 120 ntBASIC0.71□□□□□ -2.3
NUP50Q9UKX7 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.71□□□□□ -2.3
NUP50Q9UKX7 MIR4698-201ENST00000577795 80 ntBASIC0.71□□□□□ -2.3
NUP50Q9UKX7 MIR5701-3-201ENST00000578890 82 ntBASIC0.71□□□□□ -2.3
NUP50Q9UKX7 MIR5701-1-201ENST00000585138 82 ntBASIC0.71□□□□□ -2.3
NUP50Q9UKX7 AC242852.1-201ENST00000612151 96 ntBASIC0.71□□□□□ -2.3
NUP50Q9UKX7 MIR5701-2-201ENST00000615634 82 ntBASIC0.71□□□□□ -2.3
NUP50Q9UKX7 AC244015.1-201ENST00000622301 99 ntBASIC0.71□□□□□ -2.3
NUP50Q9UKX7 AC100810.6-201ENST00000638068 285 ntBASIC0.71□□□□□ -2.3
NUP50Q9UKX7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
NUP50Q9UKX7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
NUP50Q9UKX7 RNY4P14-201ENST00000363656 96 ntBASIC0.7□□□□□ -2.3
NUP50Q9UKX7 RNU4-24P-201ENST00000364565 139 ntBASIC0.7□□□□□ -2.3
NUP50Q9UKX7 RNU6-1145P-201ENST00000384246 107 ntBASIC0.7□□□□□ -2.3
NUP50Q9UKX7 SNORD116-13-201ENST00000384408 92 ntBASIC0.7□□□□□ -2.3
NUP50Q9UKX7 RNU6-136P-201ENST00000384663 107 ntBASIC0.7□□□□□ -2.3
NUP50Q9UKX7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
NUP50Q9UKX7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.7□□□□□ -2.3
NUP50Q9UKX7 AC245047.8-201ENST00000456455 284 ntBASIC0.7□□□□□ -2.3
NUP50Q9UKX7 SNORD111.1-201ENST00000516421 86 ntBASIC0.7□□□□□ -2.3
NUP50Q9UKX7 RNU6-566P-201ENST00000516790 107 ntBASIC0.7□□□□□ -2.3
NUP50Q9UKX7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.7□□□□□ -2.3
NUP50Q9UKX7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.7□□□□□ -2.3
NUP50Q9UKX7 U6.115-201ENST00000636045 103 ntBASIC0.7□□□□□ -2.3
NUP50Q9UKX7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
NUP50Q9UKX7 RNA5SP361-201ENST00000362686 118 ntBASIC0.69□□□□□ -2.3
NUP50Q9UKX7 RNU6-117P-201ENST00000365415 107 ntBASIC0.69□□□□□ -2.3
NUP50Q9UKX7 MIR190B-201ENST00000401119 79 ntBASIC0.69□□□□□ -2.3
NUP50Q9UKX7 DLGAP5P1-201ENST00000430307 464 ntBASIC0.69□□□□□ -2.3
NUP50Q9UKX7 MTND4LP16-201ENST00000440828 295 ntBASIC0.69□□□□□ -2.3
NUP50Q9UKX7 RPEP5-201ENST00000441137 268 ntBASIC0.69□□□□□ -2.3
NUP50Q9UKX7 PCNPP5-201ENST00000452246 481 ntBASIC0.69□□□□□ -2.3
NUP50Q9UKX7 RNU7-90P-201ENST00000459216 62 ntBASIC0.69□□□□□ -2.3
NUP50Q9UKX7 RNU6-351P-201ENST00000516097 100 ntBASIC0.69□□□□□ -2.3
NUP50Q9UKX7 RNU6-1278P-201ENST00000516130 107 ntBASIC0.69□□□□□ -2.3
NUP50Q9UKX7 AC136628.3-201ENST00000521868 290 ntBASIC0.69□□□□□ -2.3
NUP50Q9UKX7 AC005014.2-201ENST00000607795 599 ntBASIC0.69□□□□□ -2.3
NUP50Q9UKX7 AC108706.1-201ENST00000611053 297 ntBASIC0.69□□□□□ -2.3
NUP50Q9UKX7 AL391903.3-201ENST00000612158 163 ntBASIC0.69□□□□□ -2.3
NUP50Q9UKX7 AC104260.1-201ENST00000616660 539 ntBASIC0.69□□□□□ -2.3
NUP50Q9UKX7 AC127459.3-201ENST00000624328 466 ntBASIC0.69□□□□□ -2.3
NUP50Q9UKX7 MIR3662-201ENST00000637030 95 ntBASIC0.69□□□□□ -2.3
NUP50Q9UKX7 MIR410-201ENST00000362222 80 ntBASIC0.68□□□□□ -2.3
NUP50Q9UKX7 RNU6-874P-201ENST00000362390 105 ntBASIC0.68□□□□□ -2.3
NUP50Q9UKX7 Y_RNA.89-201ENST00000363031 102 ntBASIC0.68□□□□□ -2.3
NUP50Q9UKX7 Y_RNA.301-201ENST00000364990 103 ntBASIC0.68□□□□□ -2.3
NUP50Q9UKX7 RNU6-1013P-201ENST00000384180 107 ntBASIC0.68□□□□□ -2.3
NUP50Q9UKX7 Y_RNA.498-201ENST00000384460 102 ntBASIC0.68□□□□□ -2.3
NUP50Q9UKX7 MIR873-201ENST00000401120 77 ntBASIC0.68□□□□□ -2.3
NUP50Q9UKX7 MIR891A-201ENST00000401237 79 ntBASIC0.68□□□□□ -2.3
NUP50Q9UKX7 AC009161.1-201ENST00000417306 376 ntBASIC0.68□□□□□ -2.3
NUP50Q9UKX7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.68□□□□□ -2.3
NUP50Q9UKX7 AC004941.2-201ENST00000427009 228 ntBASIC0.68□□□□□ -2.3
NUP50Q9UKX7 Z83846.1-201ENST00000446798 265 ntBASIC0.68□□□□□ -2.3
NUP50Q9UKX7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.68□□□□□ -2.3
NUP50Q9UKX7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.68□□□□□ -2.3
NUP50Q9UKX7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.68□□□□□ -2.3
NUP50Q9UKX7 RNU7-87P-201ENST00000459343 62 ntBASIC0.68□□□□□ -2.3
NUP50Q9UKX7 RNA5SP255-201ENST00000516370 107 ntBASIC0.68□□□□□ -2.3
NUP50Q9UKX7 RNU6-1096P-201ENST00000517089 102 ntBASIC0.68□□□□□ -2.3
NUP50Q9UKX7 AC018448.1-201ENST00000552843 316 ntBASIC0.68□□□□□ -2.3
NUP50Q9UKX7 MIR3192-201ENST00000584920 77 ntBASIC0.68□□□□□ -2.3
NUP50Q9UKX7 FAM71BP1-201ENST00000604431 523 ntBASIC0.68□□□□□ -2.3
NUP50Q9UKX7 AC005828.6-201ENST00000606610 232 ntBASIC0.68□□□□□ -2.3
NUP50Q9UKX7 AC023934.1-201ENST00000574529 2389 ntBASIC0.67□□□□□ -2.3
NUP50Q9UKX7 Y_RNA.9-201ENST00000362354 101 ntBASIC0.67□□□□□ -2.3
NUP50Q9UKX7 RNU6-833P-201ENST00000363486 107 ntBASIC0.67□□□□□ -2.3
NUP50Q9UKX7 Y_RNA.157-201ENST00000363638 102 ntBASIC0.67□□□□□ -2.3
NUP50Q9UKX7 RNU6-454P-201ENST00000364292 107 ntBASIC0.67□□□□□ -2.3
NUP50Q9UKX7 RNU6-879P-201ENST00000364328 108 ntBASIC0.67□□□□□ -2.3
NUP50Q9UKX7 Y_RNA.364-201ENST00000365532 101 ntBASIC0.67□□□□□ -2.3
NUP50Q9UKX7 Y_RNA.473-201ENST00000384333 102 ntBASIC0.67□□□□□ -2.3
NUP50Q9UKX7 RNU6-342P-201ENST00000384521 104 ntBASIC0.67□□□□□ -2.3
NUP50Q9UKX7 Y_RNA.554-201ENST00000384672 102 ntBASIC0.67□□□□□ -2.3
NUP50Q9UKX7 Y_RNA.557-201ENST00000384680 107 ntBASIC0.67□□□□□ -2.3
NUP50Q9UKX7 MIR520G-201ENST00000385064 90 ntBASIC0.67□□□□□ -2.3
NUP50Q9UKX7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.67□□□□□ -2.3
NUP50Q9UKX7 MTND2P22-201ENST00000444325 1033 ntBASIC0.67□□□□□ -2.3
NUP50Q9UKX7 AC074133.1-201ENST00000515696 183 ntBASIC0.67□□□□□ -2.3
NUP50Q9UKX7 RNU6-63P-201ENST00000516690 95 ntBASIC0.67□□□□□ -2.3
NUP50Q9UKX7 AL358944.1-201ENST00000528537 144 ntBASIC0.67□□□□□ -2.3
NUP50Q9UKX7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.67□□□□□ -2.3
NUP50Q9UKX7 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.67□□□□□ -2.3
NUP50Q9UKX7 AL008636.1-201ENST00000625038 1018 ntBASIC0.67□□□□□ -2.3
NUP50Q9UKX7 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
NUP50Q9UKX7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.67□□□□□ -2.3
NUP50Q9UKX7 CASC19-280ENST00000642102 1351 ntBASIC0.67□□□□□ -2.3
NUP50Q9UKX7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.67□□□□□ -2.3
NUP50Q9UKX7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.66□□□□□ -2.3
NUP50Q9UKX7 Y_RNA.450-201ENST00000384198 113 ntBASIC0.66□□□□□ -2.3
NUP50Q9UKX7 PIGPP3-201ENST00000425307 415 ntBASIC0.66□□□□□ -2.3
NUP50Q9UKX7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.66□□□□□ -2.3
NUP50Q9UKX7 U8.22-201ENST00000459141 133 ntBASIC0.66□□□□□ -2.3
NUP50Q9UKX7 RPS29P25-201ENST00000481709 171 ntBASIC0.66□□□□□ -2.3
NUP50Q9UKX7 AC026782.1-201ENST00000512952 449 ntBASIC0.66□□□□□ -2.3
NUP50Q9UKX7 RNA5SP480-201ENST00000516840 109 ntBASIC0.66□□□□□ -2.3
NUP50Q9UKX7 AC105029.1-201ENST00000520250 669 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms