Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-1.3□□□□□ -2.62
SCN11AQ9UI33 RNU7-182P-201ENST00000459009 62 ntBASIC-1.3□□□□□ -2.62
SCN11AQ9UI33 MIR4499-201ENST00000584834 69 ntBASIC-1.3□□□□□ -2.62
SCN11AQ9UI33 RNU5B-2P-201ENST00000363036 113 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 RNU6-740P-201ENST00000364734 105 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 RNU2-62P-201ENST00000410868 191 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 AC091133.4-201ENST00000511142 308 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 RNU6-475P-201ENST00000516073 104 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 RNA5SP461-201ENST00000516451 104 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 AC021451.1-201ENST00000523498 1129 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 AC026470.2-201ENST00000561492 181 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 AC107905.1-201ENST00000616204 426 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 Y_RNA.267-201ENST00000364679 109 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 SNAP23P1-201ENST00000433229 246 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 TPTE2P1-204ENST00000435256 593 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 AC004386.2-201ENST00000441858 148 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 EXOSC3P1-201ENST00000448649 500 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 RPL7P42-201ENST00000481005 679 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 AC097462.1-201ENST00000514125 324 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 RNA5SP169-201ENST00000517268 117 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 MIR544B-201ENST00000582372 78 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 AC012467.1-201ENST00000607740 256 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 AL078596.1-201ENST00000624856 447 ntBASIC-1.31□□□□□ -2.62
SCN11AQ9UI33 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.32□□□□□ -2.62
SCN11AQ9UI33 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.32□□□□□ -2.62
SCN11AQ9UI33 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.32□□□□□ -2.62
SCN11AQ9UI33 AC092809.3-201ENST00000415453 231 ntBASIC-1.32□□□□□ -2.62
SCN11AQ9UI33 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-1.32□□□□□ -2.62
SCN11AQ9UI33 AC005178.1-201ENST00000508392 440 ntBASIC-1.32□□□□□ -2.62
SCN11AQ9UI33 HSPE1P23-201ENST00000509838 286 ntBASIC-1.32□□□□□ -2.62
SCN11AQ9UI33 RNU6-344P-201ENST00000516635 111 ntBASIC-1.32□□□□□ -2.62
SCN11AQ9UI33 AC109479.2-201ENST00000517842 174 ntBASIC-1.32□□□□□ -2.62
SCN11AQ9UI33 AC005562.2-201ENST00000618264 111 ntBASIC-1.32□□□□□ -2.62
SCN11AQ9UI33 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.33□□□□□ -2.62
SCN11AQ9UI33 U8.6-201ENST00000364939 135 ntBASIC-1.33□□□□□ -2.62
SCN11AQ9UI33 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.33□□□□□ -2.62
SCN11AQ9UI33 ADI1P3-201ENST00000549509 470 ntBASIC-1.33□□□□□ -2.62
SCN11AQ9UI33 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-1.33□□□□□ -2.62
SCN11AQ9UI33 AC138207.3-201ENST00000585289 166 ntBASIC-1.33□□□□□ -2.62
SCN11AQ9UI33 SNORA70.25-201ENST00000612741 95 ntBASIC-1.33□□□□□ -2.62
SCN11AQ9UI33 AC022306.3-201ENST00000619930 550 ntBASIC-1.33□□□□□ -2.62
SCN11AQ9UI33 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.34□□□□□ -2.62
SCN11AQ9UI33 RNU2-10P-201ENST00000516375 211 ntBASIC-1.34□□□□□ -2.62
SCN11AQ9UI33 SNORA18.4-201ENST00000516440 124 ntBASIC-1.34□□□□□ -2.62
SCN11AQ9UI33 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.34□□□□□ -2.62
SCN11AQ9UI33 AL157687.1-201ENST00000554853 619 ntBASIC-1.34□□□□□ -2.62
SCN11AQ9UI33 MIR548AC-201ENST00000585049 88 ntBASIC-1.34□□□□□ -2.62
SCN11AQ9UI33 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.34□□□□□ -2.62
SCN11AQ9UI33 RNU6-137P-201ENST00000363680 108 ntBASIC-1.34□□□□□ -2.62
SCN11AQ9UI33 SNORD51.1-201ENST00000365405 77 ntBASIC-1.34□□□□□ -2.62
SCN11AQ9UI33 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.34□□□□□ -2.62
SCN11AQ9UI33 SNORD38B-201ENST00000384690 67 ntBASIC-1.34□□□□□ -2.62
SCN11AQ9UI33 MIR518B-201ENST00000385127 83 ntBASIC-1.34□□□□□ -2.62
SCN11AQ9UI33 RNU6-607P-201ENST00000411283 108 ntBASIC-1.34□□□□□ -2.62
SCN11AQ9UI33 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.34□□□□□ -2.62
SCN11AQ9UI33 AL031274.1-201ENST00000450334 232 ntBASIC-1.34□□□□□ -2.62
SCN11AQ9UI33 AL138752.1-201ENST00000452964 351 ntBASIC-1.34□□□□□ -2.62
SCN11AQ9UI33 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-1.34□□□□□ -2.62
SCN11AQ9UI33 RNU7-62P-201ENST00000458856 62 ntBASIC-1.34□□□□□ -2.62
SCN11AQ9UI33 RNU6-274P-201ENST00000459566 107 ntBASIC-1.34□□□□□ -2.62
SCN11AQ9UI33 RNA5SP216-201ENST00000516111 123 ntBASIC-1.34□□□□□ -2.62
SCN11AQ9UI33 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-1.34□□□□□ -2.62
SCN11AQ9UI33 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.35□□□□□ -2.63
SCN11AQ9UI33 MIR1257-201ENST00000408490 117 ntBASIC-1.35□□□□□ -2.63
SCN11AQ9UI33 MTCO3P19-201ENST00000415864 321 ntBASIC-1.35□□□□□ -2.63
SCN11AQ9UI33 SNRPGP10-201ENST00000432323 225 ntBASIC-1.35□□□□□ -2.63
SCN11AQ9UI33 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-1.35□□□□□ -2.63
SCN11AQ9UI33 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.35□□□□□ -2.63
SCN11AQ9UI33 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-1.35□□□□□ -2.63
SCN11AQ9UI33 POLR3GP1-201ENST00000594073 261 ntBASIC-1.35□□□□□ -2.63
SCN11AQ9UI33 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-1.35□□□□□ -2.63
SCN11AQ9UI33 RNU4-16P-201ENST00000364737 141 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 SNORA1-201ENST00000384107 130 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 MTCO3P8-201ENST00000453691 755 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 SCARNA18B-201ENST00000458806 135 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 FRG2DP-202ENST00000566967 323 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 MTATP6P2-201ENST00000603319 678 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 AP000907.4-201ENST00000604143 237 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 AP000942.4-201ENST00000604811 241 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 uc_338.10-201ENST00000621872 182 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 AC091948.2-201ENST00000636510 279 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 RNU6-502P-201ENST00000362419 108 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 RNU6-509P-201ENST00000363519 107 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 RNU6-25P-201ENST00000383873 107 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 RNU6-29P-201ENST00000384637 107 ntBASIC-1.36□□□□□ -2.63
SCN11AQ9UI33 MIR578-201ENST00000384828 96 ntBASIC-1.36□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms