Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 MIR3684-201ENST00000579779 74 ntBASIC-0.13□□□□□ -2.43
PHRF1Q9P1Y6 MIR4804-201ENST00000581683 73 ntBASIC-0.13□□□□□ -2.43
PHRF1Q9P1Y6 AL158209.2-201ENST00000619266 216 ntBASIC-0.13□□□□□ -2.43
PHRF1Q9P1Y6 uc_338.16-201ENST00000621804 95 ntBASIC-0.13□□□□□ -2.43
PHRF1Q9P1Y6 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.13□□□□□ -2.43
PHRF1Q9P1Y6 SNORD68-201ENST00000363214 84 ntBASIC-0.13□□□□□ -2.43
PHRF1Q9P1Y6 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.13□□□□□ -2.43
PHRF1Q9P1Y6 RNU6-514P-201ENST00000384208 107 ntBASIC-0.13□□□□□ -2.43
PHRF1Q9P1Y6 MIR610-201ENST00000385139 96 ntBASIC-0.13□□□□□ -2.43
PHRF1Q9P1Y6 MT-TQ-201ENST00000387372 72 ntBASIC-0.13□□□□□ -2.43
PHRF1Q9P1Y6 MRPS10P1-201ENST00000448483 130 ntBASIC-0.13□□□□□ -2.43
PHRF1Q9P1Y6 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.13□□□□□ -2.43
PHRF1Q9P1Y6 AC114811.1-201ENST00000507207 168 ntBASIC-0.13□□□□□ -2.43
PHRF1Q9P1Y6 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.13□□□□□ -2.43
PHRF1Q9P1Y6 HIF1AP1-201ENST00000553642 175 ntBASIC-0.13□□□□□ -2.43
PHRF1Q9P1Y6 MIR4431-201ENST00000579990 94 ntBASIC-0.13□□□□□ -2.43
PHRF1Q9P1Y6 AC087683.2-201ENST00000611384 326 ntBASIC-0.13□□□□□ -2.43
PHRF1Q9P1Y6 uc_338.6-201ENST00000613544 171 ntBASIC-0.13□□□□□ -2.43
PHRF1Q9P1Y6 AC072046.2-201ENST00000618366 268 ntBASIC-0.13□□□□□ -2.43
PHRF1Q9P1Y6 AC010608.3-201ENST00000625048 527 ntBASIC-0.13□□□□□ -2.43
PHRF1Q9P1Y6 RNU6-873P-201ENST00000363833 107 ntBASIC-0.14□□□□□ -2.43
PHRF1Q9P1Y6 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.14□□□□□ -2.43
PHRF1Q9P1Y6 SNORD115-32-201ENST00000364079 82 ntBASIC-0.14□□□□□ -2.43
PHRF1Q9P1Y6 MIR122-201ENST00000385044 85 ntBASIC-0.14□□□□□ -2.43
PHRF1Q9P1Y6 RNA5SP496-201ENST00000391240 109 ntBASIC-0.14□□□□□ -2.43
PHRF1Q9P1Y6 SNORD71-201ENST00000411292 86 ntBASIC-0.14□□□□□ -2.43
PHRF1Q9P1Y6 SEPT7P4-201ENST00000437076 306 ntBASIC-0.14□□□□□ -2.43
PHRF1Q9P1Y6 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.14□□□□□ -2.43
PHRF1Q9P1Y6 TPTE2P5-203ENST00000458118 728 ntBASIC-0.14□□□□□ -2.43
PHRF1Q9P1Y6 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.14□□□□□ -2.43
PHRF1Q9P1Y6 RNA5SP268-201ENST00000516828 124 ntBASIC-0.14□□□□□ -2.43
PHRF1Q9P1Y6 MIR3612-201ENST00000579753 87 ntBASIC-0.14□□□□□ -2.43
PHRF1Q9P1Y6 MIR4743-201ENST00000584576 69 ntBASIC-0.14□□□□□ -2.43
PHRF1Q9P1Y6 AC104408.1-201ENST00000605241 170 ntBASIC-0.14□□□□□ -2.43
PHRF1Q9P1Y6 RNU6-94P-201ENST00000607728 107 ntBASIC-0.14□□□□□ -2.43
PHRF1Q9P1Y6 HULC.1-201ENST00000612720 240 ntBASIC-0.14□□□□□ -2.43
PHRF1Q9P1Y6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
PHRF1Q9P1Y6 RNU6-369P-201ENST00000362515 102 ntBASIC-0.15□□□□□ -2.43
PHRF1Q9P1Y6 RNU6-302P-201ENST00000365249 107 ntBASIC-0.15□□□□□ -2.43
PHRF1Q9P1Y6 RNY1P8-201ENST00000383970 114 ntBASIC-0.15□□□□□ -2.43
PHRF1Q9P1Y6 MIR153-2-201ENST00000385225 87 ntBASIC-0.15□□□□□ -2.43
PHRF1Q9P1Y6 MIR644A-201ENST00000385262 94 ntBASIC-0.15□□□□□ -2.43
PHRF1Q9P1Y6 AL593851.1-201ENST00000426171 157 ntBASIC-0.15□□□□□ -2.43
PHRF1Q9P1Y6 AL356010.1-201ENST00000456364 102 ntBASIC-0.15□□□□□ -2.43
PHRF1Q9P1Y6 snoU13.11-201ENST00000459219 104 ntBASIC-0.15□□□□□ -2.43
PHRF1Q9P1Y6 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.15□□□□□ -2.43
PHRF1Q9P1Y6 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.15□□□□□ -2.43
PHRF1Q9P1Y6 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.15□□□□□ -2.43
PHRF1Q9P1Y6 SNORA40.12-201ENST00000516329 111 ntBASIC-0.15□□□□□ -2.43
PHRF1Q9P1Y6 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.15□□□□□ -2.43
PHRF1Q9P1Y6 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.15□□□□□ -2.43
PHRF1Q9P1Y6 AL133215.3-201ENST00000609801 448 ntBASIC-0.15□□□□□ -2.43
PHRF1Q9P1Y6 TUSC7.1-201ENST00000610969 165 ntBASIC-0.15□□□□□ -2.43
PHRF1Q9P1Y6 AL158063.1-201ENST00000615349 536 ntBASIC-0.15□□□□□ -2.43
PHRF1Q9P1Y6 AP002371.2-201ENST00000624450 503 ntBASIC-0.15□□□□□ -2.43
PHRF1Q9P1Y6 AL008636.1-201ENST00000625038 1018 ntBASIC-0.15□□□□□ -2.43
PHRF1Q9P1Y6 SNORA42.1-201ENST00000363515 137 ntBASIC-0.16□□□□□ -2.43
PHRF1Q9P1Y6 RNU6-727P-201ENST00000363592 107 ntBASIC-0.16□□□□□ -2.43
PHRF1Q9P1Y6 RNU6-407P-201ENST00000365280 104 ntBASIC-0.16□□□□□ -2.43
PHRF1Q9P1Y6 SNORA20B-201ENST00000384220 132 ntBASIC-0.16□□□□□ -2.43
PHRF1Q9P1Y6 RNY3P9-201ENST00000384727 106 ntBASIC-0.16□□□□□ -2.43
PHRF1Q9P1Y6 MIR643-201ENST00000385267 97 ntBASIC-0.16□□□□□ -2.43
PHRF1Q9P1Y6 MIR892B-201ENST00000401279 77 ntBASIC-0.16□□□□□ -2.43
PHRF1Q9P1Y6 AL606923.1-201ENST00000406616 190 ntBASIC-0.16□□□□□ -2.43
PHRF1Q9P1Y6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.16□□□□□ -2.43
PHRF1Q9P1Y6 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.16□□□□□ -2.43
PHRF1Q9P1Y6 MTND4P32-201ENST00000437189 1237 ntBASIC-0.16□□□□□ -2.43
PHRF1Q9P1Y6 MTND2P38-201ENST00000522536 667 ntBASIC-0.16□□□□□ -2.43
PHRF1Q9P1Y6 AC120024.3-201ENST00000603167 156 ntBASIC-0.16□□□□□ -2.43
PHRF1Q9P1Y6 AC103705.1-201ENST00000619013 241 ntBASIC-0.16□□□□□ -2.43
PHRF1Q9P1Y6 SNORA27.1-201ENST00000362604 124 ntBASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 RNU6-654P-201ENST00000364373 107 ntBASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 SNORA32.1-201ENST00000364514 115 ntBASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 RNA5SP517-201ENST00000364724 117 ntBASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 RNU6V-201ENST00000384105 107 ntBASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 Y_RNA.560-201ENST00000384689 102 ntBASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 RNA5SP475-201ENST00000410568 110 ntBASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 SSR1P2-201ENST00000415208 787 ntBASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 ZNF114P1-201ENST00000453500 292 ntBASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 RN7SKP287-201ENST00000516546 266 ntBASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 AP002963.1-201ENST00000530590 184 ntBASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 MIR5696-201ENST00000578474 85 ntBASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 MIR548AX-201ENST00000580117 73 ntBASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 AC090897.1-201ENST00000580909 226 ntBASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 AL022161.1-201ENST00000604390 213 ntBASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 AC008536.2-201ENST00000607284 349 ntBASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 AL136370.1-201ENST00000608166 691 ntBASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 AC127459.3-201ENST00000624328 466 ntBASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.16□□□□□ -2.44
PHRF1Q9P1Y6 SNORA72.1-201ENST00000363485 129 ntBASIC-0.17□□□□□ -2.44
PHRF1Q9P1Y6 RNU6-996P-201ENST00000365438 107 ntBASIC-0.17□□□□□ -2.44
PHRF1Q9P1Y6 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.17□□□□□ -2.44
PHRF1Q9P1Y6 RNU6-281P-201ENST00000384212 103 ntBASIC-0.17□□□□□ -2.44
PHRF1Q9P1Y6 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.17□□□□□ -2.44
PHRF1Q9P1Y6 MIR487A-201ENST00000385009 80 ntBASIC-0.17□□□□□ -2.44
PHRF1Q9P1Y6 MIR516B2-201ENST00000385190 85 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms