Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 SNORD81.1-201ENST00000363064 77 ntBASIC1.58□□□□□ -2.16
NDE1Q9NXR1 Y_RNA.140-201ENST00000363474 103 ntBASIC1.58□□□□□ -2.16
NDE1Q9NXR1 SNORD63-201ENST00000384262 68 ntBASIC1.58□□□□□ -2.16
NDE1Q9NXR1 Y_RNA.462-201ENST00000384268 102 ntBASIC1.58□□□□□ -2.16
NDE1Q9NXR1 SNORD115-46-201ENST00000390982 71 ntBASIC1.58□□□□□ -2.16
NDE1Q9NXR1 AL031003.1-201ENST00000404229 172 ntBASIC1.58□□□□□ -2.16
NDE1Q9NXR1 MIR548F4-201ENST00000408515 105 ntBASIC1.58□□□□□ -2.16
NDE1Q9NXR1 RNU6-1186P-201ENST00000410429 97 ntBASIC1.58□□□□□ -2.16
NDE1Q9NXR1 RNA5SP247-201ENST00000411181 105 ntBASIC1.58□□□□□ -2.16
NDE1Q9NXR1 AL603825.1-201ENST00000438481 80 ntBASIC1.58□□□□□ -2.16
NDE1Q9NXR1 AC010409.1-201ENST00000487382 476 ntBASIC1.58□□□□□ -2.16
NDE1Q9NXR1 RNU6-1045P-201ENST00000516321 107 ntBASIC1.58□□□□□ -2.16
NDE1Q9NXR1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.58□□□□□ -2.16
NDE1Q9NXR1 AC005786.1-201ENST00000588553 154 ntBASIC1.58□□□□□ -2.16
NDE1Q9NXR1 AC006380.1-201ENST00000603598 186 ntBASIC1.58□□□□□ -2.16
NDE1Q9NXR1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.58□□□□□ -2.16
NDE1Q9NXR1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
NDE1Q9NXR1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.57□□□□□ -2.16
NDE1Q9NXR1 SNORA27.1-201ENST00000362604 124 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 snoU2_19.2-201ENST00000363024 80 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 Y_RNA.152-201ENST00000363578 100 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 Y_RNA.238-201ENST00000364441 102 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 Y_RNA.243-201ENST00000364481 109 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 Y_RNA.329-201ENST00000365209 107 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 Y_RNA.338-201ENST00000365320 114 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 RNU6-1105P-201ENST00000384774 107 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 MIR9-3-201ENST00000385084 90 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
NDE1Q9NXR1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
NDE1Q9NXR1 RNU6-1109P-201ENST00000391187 107 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.57□□□□□ -2.16
NDE1Q9NXR1 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.57□□□□□ -2.16
NDE1Q9NXR1 MRPS10P1-201ENST00000448483 130 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 AC005042.3-201ENST00000453230 174 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 HSPE1P25-201ENST00000455484 251 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 RPS29P11-201ENST00000496507 171 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 AC010598.1-201ENST00000510378 103 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 RNU6-436P-201ENST00000516171 114 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 RNU6-970P-201ENST00000516312 107 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 RNU6-570P-201ENST00000517051 105 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.57□□□□□ -2.16
NDE1Q9NXR1 AP003733.2-201ENST00000529409 171 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 MIR4438-201ENST00000585271 93 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 DEFB117-201ENST00000602356 141 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 AC005828.6-201ENST00000606610 232 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 AL353149.1-201ENST00000610667 244 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.57□□□□□ -2.16
NDE1Q9NXR1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
NDE1Q9NXR1 AC010615.1-201ENST00000594254 1764 ntBASIC1.57□□□□□ -2.16
NDE1Q9NXR1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
NDE1Q9NXR1 MIR126-201ENST00000362291 85 ntBASIC1.56□□□□□ -2.16
NDE1Q9NXR1 Y_RNA.276-201ENST00000364732 109 ntBASIC1.56□□□□□ -2.16
NDE1Q9NXR1 RNU6-505P-201ENST00000384427 107 ntBASIC1.56□□□□□ -2.16
NDE1Q9NXR1 SNORA48.1-201ENST00000390879 135 ntBASIC1.56□□□□□ -2.16
NDE1Q9NXR1 RNU6-955P-201ENST00000410497 104 ntBASIC1.56□□□□□ -2.16
NDE1Q9NXR1 RN7SKP101-201ENST00000411376 320 ntBASIC1.56□□□□□ -2.16
NDE1Q9NXR1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.56□□□□□ -2.16
NDE1Q9NXR1 AL358176.2-201ENST00000425769 204 ntBASIC1.56□□□□□ -2.16
NDE1Q9NXR1 AC025465.3-201ENST00000510570 311 ntBASIC1.56□□□□□ -2.16
NDE1Q9NXR1 RNA5SP20-201ENST00000515976 84 ntBASIC1.56□□□□□ -2.16
NDE1Q9NXR1 RNU6-496P-201ENST00000516145 99 ntBASIC1.56□□□□□ -2.16
NDE1Q9NXR1 RNU6-63P-201ENST00000516690 95 ntBASIC1.56□□□□□ -2.16
NDE1Q9NXR1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.56□□□□□ -2.16
NDE1Q9NXR1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.56□□□□□ -2.16
NDE1Q9NXR1 AL117187.1-201ENST00000555482 181 ntBASIC1.56□□□□□ -2.16
NDE1Q9NXR1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.56□□□□□ -2.16
NDE1Q9NXR1 Y_RNA.16-201ENST00000362421 102 ntBASIC1.55□□□□□ -2.16
NDE1Q9NXR1 Y_RNA.164-201ENST00000363709 102 ntBASIC1.55□□□□□ -2.16
NDE1Q9NXR1 Y_RNA.172-201ENST00000363765 102 ntBASIC1.55□□□□□ -2.16
NDE1Q9NXR1 Y_RNA.383-201ENST00000383855 97 ntBASIC1.55□□□□□ -2.16
NDE1Q9NXR1 SNORA8-201ENST00000384574 139 ntBASIC1.55□□□□□ -2.16
NDE1Q9NXR1 Y_RNA.541-201ENST00000384640 113 ntBASIC1.55□□□□□ -2.16
NDE1Q9NXR1 Y_RNA.574-201ENST00000384766 95 ntBASIC1.55□□□□□ -2.16
NDE1Q9NXR1 RNA5SP323-201ENST00000391094 133 ntBASIC1.55□□□□□ -2.16
NDE1Q9NXR1 MIR873-201ENST00000401120 77 ntBASIC1.55□□□□□ -2.16
NDE1Q9NXR1 RPL23AP36-201ENST00000413895 458 ntBASIC1.55□□□□□ -2.16
NDE1Q9NXR1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.55□□□□□ -2.16
NDE1Q9NXR1 AC245047.4-201ENST00000433189 144 ntBASIC1.55□□□□□ -2.16
NDE1Q9NXR1 AC003989.2-201ENST00000440224 169 ntBASIC1.55□□□□□ -2.16
NDE1Q9NXR1 AL731563.1-201ENST00000442202 214 ntBASIC1.55□□□□□ -2.16
NDE1Q9NXR1 RNA5SP57-201ENST00000459463 123 ntBASIC1.55□□□□□ -2.16
NDE1Q9NXR1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.55□□□□□ -2.16
NDE1Q9NXR1 RNU6-1146P-201ENST00000516282 102 ntBASIC1.55□□□□□ -2.16
NDE1Q9NXR1 RNU7-128P-201ENST00000517247 62 ntBASIC1.55□□□□□ -2.16
NDE1Q9NXR1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.55□□□□□ -2.16
NDE1Q9NXR1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.55□□□□□ -2.16
NDE1Q9NXR1 AL137100.2-201ENST00000555786 315 ntBASIC1.55□□□□□ -2.16
NDE1Q9NXR1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.55□□□□□ -2.16
NDE1Q9NXR1 U6.108-201ENST00000637764 58 ntBASIC1.55□□□□□ -2.16
NDE1Q9NXR1 AL356292.1-201ENST00000283110 373 ntBASIC1.54□□□□□ -2.16
NDE1Q9NXR1 Y_RNA.47-201ENST00000362697 108 ntBASIC1.54□□□□□ -2.16
NDE1Q9NXR1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.54□□□□□ -2.16
NDE1Q9NXR1 RNU6-136P-201ENST00000384663 107 ntBASIC1.54□□□□□ -2.16
NDE1Q9NXR1 MIR320A-201ENST00000385302 82 ntBASIC1.54□□□□□ -2.16
NDE1Q9NXR1 Y_RNA.581-201ENST00000391017 97 ntBASIC1.54□□□□□ -2.16
NDE1Q9NXR1 EBAG9P1-201ENST00000418955 543 ntBASIC1.54□□□□□ -2.16
NDE1Q9NXR1 CST2P1-201ENST00000425770 87 ntBASIC1.54□□□□□ -2.16
NDE1Q9NXR1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.54□□□□□ -2.16
NDE1Q9NXR1 POLR2KP2-201ENST00000438155 177 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms