Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LIN7CQ9NUP9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
LIN7CQ9NUP9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
LIN7CQ9NUP9 AC131280.1-202ENST00000624067 4211 ntBASIC1.96□□□□□ -2.1
LIN7CQ9NUP9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LIN7CQ9NUP9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LIN7CQ9NUP9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
LIN7CQ9NUP9 Y_RNA.144-201ENST00000363521 113 ntBASIC1.95□□□□□ -2.1
LIN7CQ9NUP9 SNORA4.2-201ENST00000365313 147 ntBASIC1.95□□□□□ -2.1
LIN7CQ9NUP9 MIR518C-201ENST00000384822 101 ntBASIC1.95□□□□□ -2.1
LIN7CQ9NUP9 MIR520G-201ENST00000385064 90 ntBASIC1.95□□□□□ -2.1
LIN7CQ9NUP9 HSPE1P21-201ENST00000438283 308 ntBASIC1.95□□□□□ -2.1
LIN7CQ9NUP9 HSPE1P9-201ENST00000440046 311 ntBASIC1.95□□□□□ -2.1
LIN7CQ9NUP9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.95□□□□□ -2.1
LIN7CQ9NUP9 RNU6-1096P-201ENST00000517089 102 ntBASIC1.95□□□□□ -2.1
LIN7CQ9NUP9 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.95□□□□□ -2.1
LIN7CQ9NUP9 AC005972.2-201ENST00000604690 348 ntBASIC1.95□□□□□ -2.1
LIN7CQ9NUP9 MIR6852-201ENST00000621699 66 ntBASIC1.95□□□□□ -2.1
LIN7CQ9NUP9 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.95□□□□□ -2.1
LIN7CQ9NUP9 MIR1291-201ENST00000627649 87 ntBASIC1.95□□□□□ -2.1
LIN7CQ9NUP9 AC068647.2-201ENST00000637380 353 ntBASIC1.95□□□□□ -2.1
LIN7CQ9NUP9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LIN7CQ9NUP9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.94□□□□□ -2.1
LIN7CQ9NUP9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LIN7CQ9NUP9 RNU6-801P-201ENST00000364087 105 ntBASIC1.94□□□□□ -2.1
LIN7CQ9NUP9 RNU6-463P-201ENST00000384340 107 ntBASIC1.94□□□□□ -2.1
LIN7CQ9NUP9 Y_RNA.500-201ENST00000384466 111 ntBASIC1.94□□□□□ -2.1
LIN7CQ9NUP9 Y_RNA.556-201ENST00000384677 113 ntBASIC1.94□□□□□ -2.1
LIN7CQ9NUP9 AL135786.1-201ENST00000415892 214 ntBASIC1.94□□□□□ -2.1
LIN7CQ9NUP9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.94□□□□□ -2.1
LIN7CQ9NUP9 RPS4XP11-201ENST00000446897 772 ntBASIC1.94□□□□□ -2.1
LIN7CQ9NUP9 RPS27P21-201ENST00000486977 252 ntBASIC1.94□□□□□ -2.1
LIN7CQ9NUP9 RPL36AP21-201ENST00000490372 323 ntBASIC1.94□□□□□ -2.1
LIN7CQ9NUP9 RNU6-1291P-201ENST00000516591 104 ntBASIC1.94□□□□□ -2.1
LIN7CQ9NUP9 AC136628.3-201ENST00000521868 290 ntBASIC1.94□□□□□ -2.1
LIN7CQ9NUP9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.94□□□□□ -2.1
LIN7CQ9NUP9 U4.1-201ENST00000620349 87 ntBASIC1.94□□□□□ -2.1
LIN7CQ9NUP9 7SK.10-201ENST00000621414 298 ntBASIC1.94□□□□□ -2.1
LIN7CQ9NUP9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LIN7CQ9NUP9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 AC016717.2-201ENST00000609089 5141 ntBASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 AC005336.3-201ENST00000623833 2679 ntBASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 MIR335-201ENST00000362173 94 ntBASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 RNU6-1048P-201ENST00000364054 107 ntBASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 Y_RNA.288-201ENST00000364854 92 ntBASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 RNU6-662P-201ENST00000384253 104 ntBASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 RNU2-38P-201ENST00000410856 79 ntBASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 RNU2-14P-201ENST00000411053 191 ntBASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 AC233266.1-201ENST00000454518 96 ntBASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 UBE2DNL-203ENST00000474922 222 ntBASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 SNORA27.4-201ENST00000516650 95 ntBASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 RNU6-341P-201ENST00000516973 96 ntBASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 AC121758.2-201ENST00000553271 193 ntBASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 AC022254.1-201ENST00000567857 235 ntBASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 AC242852.1-201ENST00000612151 96 ntBASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 MIR8054-201ENST00000620877 86 ntBASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 AC244015.1-201ENST00000622301 99 ntBASIC1.93□□□□□ -2.1
LIN7CQ9NUP9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LIN7CQ9NUP9 Y_RNA.518-201ENST00000384552 113 ntBASIC1.92□□□□□ -2.1
LIN7CQ9NUP9 SNORA26.5-201ENST00000391215 123 ntBASIC1.92□□□□□ -2.1
LIN7CQ9NUP9 SNORD127-201ENST00000458892 86 ntBASIC1.92□□□□□ -2.1
LIN7CQ9NUP9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.92□□□□□ -2.1
LIN7CQ9NUP9 AC117454.1-201ENST00000491120 168 ntBASIC1.92□□□□□ -2.1
LIN7CQ9NUP9 AC234781.5-201ENST00000508429 271 ntBASIC1.92□□□□□ -2.1
LIN7CQ9NUP9 SNORA31.10-201ENST00000516482 106 ntBASIC1.92□□□□□ -2.1
LIN7CQ9NUP9 RNA5SP481-201ENST00000516814 122 ntBASIC1.92□□□□□ -2.1
LIN7CQ9NUP9 MIR4713-201ENST00000582691 75 ntBASIC1.92□□□□□ -2.1
LIN7CQ9NUP9 MIR3149-201ENST00000584629 83 ntBASIC1.92□□□□□ -2.1
LIN7CQ9NUP9 AC012433.1-201ENST00000588916 398 ntBASIC1.92□□□□□ -2.1
LIN7CQ9NUP9 MIR6840-201ENST00000611937 71 ntBASIC1.92□□□□□ -2.1
LIN7CQ9NUP9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LIN7CQ9NUP9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.92□□□□□ -2.1
LIN7CQ9NUP9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LIN7CQ9NUP9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
LIN7CQ9NUP9 U8.7-201ENST00000364940 136 ntBASIC1.91□□□□□ -2.1
LIN7CQ9NUP9 RNU6-702P-201ENST00000364982 107 ntBASIC1.91□□□□□ -2.1
LIN7CQ9NUP9 SNORA72.4-201ENST00000384174 132 ntBASIC1.91□□□□□ -2.1
LIN7CQ9NUP9 Y_RNA.452-201ENST00000384202 108 ntBASIC1.91□□□□□ -2.1
LIN7CQ9NUP9 RNU6-763P-201ENST00000390865 106 ntBASIC1.91□□□□□ -2.1
LIN7CQ9NUP9 RNU6-440P-201ENST00000390882 105 ntBASIC1.91□□□□□ -2.1
LIN7CQ9NUP9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.91□□□□□ -2.1
LIN7CQ9NUP9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.91□□□□□ -2.1
LIN7CQ9NUP9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.91□□□□□ -2.1
LIN7CQ9NUP9 AC104332.1-201ENST00000440471 797 ntBASIC1.91□□□□□ -2.1
LIN7CQ9NUP9 SNORA59A-201ENST00000459326 152 ntBASIC1.91□□□□□ -2.1
LIN7CQ9NUP9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.91□□□□□ -2.1
LIN7CQ9NUP9 Y_RNA.668-201ENST00000516233 93 ntBASIC1.91□□□□□ -2.1
LIN7CQ9NUP9 AC021269.2-201ENST00000532318 330 ntBASIC1.91□□□□□ -2.1
LIN7CQ9NUP9 AL929325.1-201ENST00000603096 117 ntBASIC1.91□□□□□ -2.1
LIN7CQ9NUP9 AC103810.6-201ENST00000606708 136 ntBASIC1.91□□□□□ -2.1
LIN7CQ9NUP9 AL627230.6-201ENST00000611129 280 ntBASIC1.91□□□□□ -2.1
LIN7CQ9NUP9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.91□□□□□ -2.1
LIN7CQ9NUP9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.91□□□□□ -2.1
LIN7CQ9NUP9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.91□□□□□ -2.1
LIN7CQ9NUP9 AC134026.1-201ENST00000623249 2239 ntBASIC1.9□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms