Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC090617.3-201ENST00000573670 475 ntBASIC0.56□□□□□ -2.32
TREX1Q9NSU2 MIR3684-201ENST00000579779 74 ntBASIC0.56□□□□□ -2.32
TREX1Q9NSU2 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.56□□□□□ -2.32
TREX1Q9NSU2 AC012557.2-201ENST00000605919 418 ntBASIC0.56□□□□□ -2.32
TREX1Q9NSU2 AC004832.4-201ENST00000608952 331 ntBASIC0.56□□□□□ -2.32
TREX1Q9NSU2 MIR6513-201ENST00000621188 64 ntBASIC0.56□□□□□ -2.32
TREX1Q9NSU2 AC127459.3-201ENST00000624328 466 ntBASIC0.56□□□□□ -2.32
TREX1Q9NSU2 MTND5P16-201ENST00000460269 1703 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
TREX1Q9NSU2 RNU6-451P-201ENST00000362921 107 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 RNU6-1059P-201ENST00000363752 98 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 RNY3P3-201ENST00000363816 102 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 RNU4-41P-201ENST00000364426 143 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 RNU6-1264P-201ENST00000383891 107 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 RNU6-163P-201ENST00000384396 106 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 MIR526A1-201ENST00000384897 85 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.55□□□□□ -2.32
TREX1Q9NSU2 Z98949.2-201ENST00000440996 144 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 RNU7-87P-201ENST00000459343 62 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.55□□□□□ -2.32
TREX1Q9NSU2 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 AC026407.1-201ENST00000518369 204 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.55□□□□□ -2.32
TREX1Q9NSU2 AC005730.3-201ENST00000583067 366 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 MIR3942-201ENST00000585264 109 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 AL391903.3-201ENST00000612158 163 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
TREX1Q9NSU2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
TREX1Q9NSU2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.54□□□□□ -2.32
TREX1Q9NSU2 RNA5SP499-201ENST00000363982 119 ntBASIC0.54□□□□□ -2.32
TREX1Q9NSU2 Y_RNA.498-201ENST00000384460 102 ntBASIC0.54□□□□□ -2.32
TREX1Q9NSU2 MIR216A-201ENST00000385063 110 ntBASIC0.54□□□□□ -2.32
TREX1Q9NSU2 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.54□□□□□ -2.32
TREX1Q9NSU2 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.54□□□□□ -2.32
TREX1Q9NSU2 PIGPP3-201ENST00000425307 415 ntBASIC0.54□□□□□ -2.32
TREX1Q9NSU2 AL137792.2-201ENST00000443484 235 ntBASIC0.54□□□□□ -2.32
TREX1Q9NSU2 RNU6-1096P-201ENST00000517089 102 ntBASIC0.54□□□□□ -2.32
TREX1Q9NSU2 RNU1-54P-201ENST00000517181 120 ntBASIC0.54□□□□□ -2.32
TREX1Q9NSU2 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.54□□□□□ -2.32
TREX1Q9NSU2 AC023827.1-201ENST00000569247 97 ntBASIC0.54□□□□□ -2.32
TREX1Q9NSU2 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.54□□□□□ -2.32
TREX1Q9NSU2 MIR3192-201ENST00000584920 77 ntBASIC0.54□□□□□ -2.32
TREX1Q9NSU2 MIR1321-201ENST00000637766 79 ntBASIC0.54□□□□□ -2.32
TREX1Q9NSU2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.53□□□□□ -2.32
TREX1Q9NSU2 SNORD68-201ENST00000363214 84 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 RNU6-833P-201ENST00000363486 107 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 RNU6-596P-201ENST00000365395 98 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 Y_RNA.490-201ENST00000384413 102 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 Y_RNA.621-201ENST00000411065 96 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 ELOCP21-201ENST00000412558 336 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 USP9YP30-201ENST00000430729 455 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 AL035398.1-201ENST00000430869 322 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 MTND1P1-201ENST00000445453 368 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 RPS20P10-201ENST00000451209 253 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 PCNPP5-201ENST00000452246 481 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 RNU6-314P-201ENST00000516574 104 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 AL512605.2-201ENST00000592972 256 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 AL353765.1-201ENST00000605514 183 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
TREX1Q9NSU2 MIR6128-201ENST00000615528 109 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.53□□□□□ -2.32
TREX1Q9NSU2 AL589743.1-201ENST00000551932 2712 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 Y_RNA.51-201ENST00000362725 102 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 RNA5SP264-201ENST00000363115 107 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 RNU6-879P-201ENST00000364328 108 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 MIR329-1-201ENST00000385028 80 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 MIR520G-201ENST00000385064 90 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 RNA5SP475-201ENST00000410568 110 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.52□□□□□ -2.33
TREX1Q9NSU2 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.52□□□□□ -2.33
TREX1Q9NSU2 snoU13.25-201ENST00000458945 104 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 COX6CP6-201ENST00000490840 228 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.52□□□□□ -2.33
TREX1Q9NSU2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.52□□□□□ -2.33
TREX1Q9NSU2 RNA5SP436-201ENST00000516020 115 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 RNU6-63P-201ENST00000516690 95 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 AC022868.1-201ENST00000517767 391 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 AC120024.3-201ENST00000603167 156 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 AL357075.2-201ENST00000614906 189 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 AC104260.1-201ENST00000616660 539 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 MIR6779-201ENST00000617283 64 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 AC022079.1-201ENST00000621546 602 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 U6.115-201ENST00000636045 103 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 AC024614.3-201ENST00000637860 256 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 RNA5SP347-201ENST00000362445 119 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 RNU6-1090P-201ENST00000364065 94 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 Y_RNA.336-201ENST00000365307 109 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 RNU6-1335P-201ENST00000365426 107 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 SNORD89-201ENST00000390981 114 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 MIR873-201ENST00000401120 77 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 RNU5A-5P-201ENST00000411054 116 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.51□□□□□ -2.33
TREX1Q9NSU2 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 CYCTP-201ENST00000504253 315 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 SNORA70.12-201ENST00000516084 153 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 RNU4-54P-201ENST00000516428 129 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 AC018448.1-201ENST00000552843 316 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 AC125232.2-201ENST00000592457 143 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 AC245008.1-201ENST00000608123 476 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms