Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 SNORA42.1-201ENST00000363515 137 ntBASIC-0.03□□□□□ -2.41
CISHQ9NSE2 RNU6-1103P-201ENST00000384150 107 ntBASIC-0.03□□□□□ -2.41
CISHQ9NSE2 RNU6-541P-201ENST00000384709 110 ntBASIC-0.03□□□□□ -2.41
CISHQ9NSE2 RNY3P10-201ENST00000384764 102 ntBASIC-0.03□□□□□ -2.41
CISHQ9NSE2 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.03□□□□□ -2.41
CISHQ9NSE2 SNORD71-201ENST00000411292 86 ntBASIC-0.03□□□□□ -2.41
CISHQ9NSE2 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.03□□□□□ -2.41
CISHQ9NSE2 ELOCP24-201ENST00000456370 334 ntBASIC-0.03□□□□□ -2.41
CISHQ9NSE2 SNORD123-201ENST00000459473 70 ntBASIC-0.03□□□□□ -2.41
CISHQ9NSE2 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.03□□□□□ -2.41
CISHQ9NSE2 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.03□□□□□ -2.41
CISHQ9NSE2 MTCO2P30-201ENST00000503662 364 ntBASIC-0.03□□□□□ -2.41
CISHQ9NSE2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.03□□□□□ -2.41
CISHQ9NSE2 AC046134.1-201ENST00000514454 666 ntBASIC-0.03□□□□□ -2.41
CISHQ9NSE2 SNORA40.12-201ENST00000516329 111 ntBASIC-0.03□□□□□ -2.41
CISHQ9NSE2 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.03□□□□□ -2.41
CISHQ9NSE2 MTCO2P4-201ENST00000517968 247 ntBASIC-0.03□□□□□ -2.41
CISHQ9NSE2 AC069113.3-201ENST00000521019 150 ntBASIC-0.03□□□□□ -2.41
CISHQ9NSE2 AC245884.10-201ENST00000597355 337 ntBASIC-0.03□□□□□ -2.41
CISHQ9NSE2 AC005828.6-201ENST00000606610 232 ntBASIC-0.03□□□□□ -2.41
CISHQ9NSE2 AF250324.2-201ENST00000608299 610 ntBASIC-0.03□□□□□ -2.41
CISHQ9NSE2 AC092807.2-201ENST00000609367 243 ntBASIC-0.03□□□□□ -2.41
CISHQ9NSE2 AL591926.4-201ENST00000616895 298 ntBASIC-0.03□□□□□ -2.41
CISHQ9NSE2 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.03□□□□□ -2.41
CISHQ9NSE2 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.03□□□□□ -2.41
CISHQ9NSE2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.03□□□□□ -2.42
CISHQ9NSE2 SNORD68-201ENST00000363214 84 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 SNORD118-201ENST00000363593 134 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 SNORD114-9-201ENST00000364370 72 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 RNU6-580P-201ENST00000365159 107 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 RNU6-136P-201ENST00000384663 107 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 MIR520F-201ENST00000384824 87 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 MT-TH-201ENST00000387441 69 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 SNORA40.8-201ENST00000411034 126 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 ELOCP21-201ENST00000412558 336 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.04□□□□□ -2.42
CISHQ9NSE2 AC073464.1-201ENST00000429823 534 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 AC005534.2-201ENST00000431047 433 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 AL606489.2-201ENST00000433886 234 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.04□□□□□ -2.42
CISHQ9NSE2 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 RNU6-107P-201ENST00000516643 102 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 MTND2P38-201ENST00000522536 667 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.04□□□□□ -2.42
CISHQ9NSE2 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 MIR4768-201ENST00000585270 74 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 AL355073.2-201ENST00000612106 557 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 AC072046.2-201ENST00000618366 268 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 AC073534.2-201ENST00000620377 381 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 AC127459.3-201ENST00000624328 466 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 AC007494.3-201ENST00000624660 743 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.04□□□□□ -2.42
CISHQ9NSE2 MIR4251-201ENST00000635819 61 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 U6.115-201ENST00000636045 103 ntBASIC-0.04□□□□□ -2.42
CISHQ9NSE2 SNORD114-26-201ENST00000363543 72 ntBASIC-0.05□□□□□ -2.42
CISHQ9NSE2 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.05□□□□□ -2.42
CISHQ9NSE2 SNORD45.3-201ENST00000363836 72 ntBASIC-0.05□□□□□ -2.42
CISHQ9NSE2 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.05□□□□□ -2.42
CISHQ9NSE2 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.05□□□□□ -2.42
CISHQ9NSE2 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.05□□□□□ -2.42
CISHQ9NSE2 RNU6-281P-201ENST00000384212 103 ntBASIC-0.05□□□□□ -2.42
CISHQ9NSE2 RNU5A-2P-201ENST00000384337 116 ntBASIC-0.05□□□□□ -2.42
CISHQ9NSE2 SNORA26.8-201ENST00000391306 124 ntBASIC-0.05□□□□□ -2.42
CISHQ9NSE2 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.05□□□□□ -2.42
CISHQ9NSE2 AL353572.1-201ENST00000442490 417 ntBASIC-0.05□□□□□ -2.42
CISHQ9NSE2 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.05□□□□□ -2.42
CISHQ9NSE2 SNORA25.12-201ENST00000516202 82 ntBASIC-0.05□□□□□ -2.42
CISHQ9NSE2 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.05□□□□□ -2.42
CISHQ9NSE2 RNU6-63P-201ENST00000516690 95 ntBASIC-0.05□□□□□ -2.42
CISHQ9NSE2 SCARNA1-201ENST00000517138 166 ntBASIC-0.05□□□□□ -2.42
CISHQ9NSE2 AL355375.2-201ENST00000574825 175 ntBASIC-0.05□□□□□ -2.42
CISHQ9NSE2 AC109347.2-201ENST00000610220 349 ntBASIC-0.05□□□□□ -2.42
CISHQ9NSE2 MIR8087-201ENST00000612745 78 ntBASIC-0.05□□□□□ -2.42
CISHQ9NSE2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.05□□□□□ -2.42
CISHQ9NSE2 MIR371B-201ENST00000638082 66 ntBASIC-0.05□□□□□ -2.42
CISHQ9NSE2 RNA5SP214-201ENST00000363378 118 ntBASIC-0.06□□□□□ -2.42
CISHQ9NSE2 RNU6-522P-201ENST00000364497 107 ntBASIC-0.06□□□□□ -2.42
CISHQ9NSE2 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.06□□□□□ -2.42
CISHQ9NSE2 SNORD28B-201ENST00000390993 75 ntBASIC-0.06□□□□□ -2.42
CISHQ9NSE2 MIR873-201ENST00000401120 77 ntBASIC-0.06□□□□□ -2.42
CISHQ9NSE2 AL390729.2-201ENST00000416137 156 ntBASIC-0.06□□□□□ -2.42
CISHQ9NSE2 AC015818.7-201ENST00000428754 109 ntBASIC-0.06□□□□□ -2.42
CISHQ9NSE2 AC073261.1-201ENST00000429409 121 ntBASIC-0.06□□□□□ -2.42
CISHQ9NSE2 AC087499.7-201ENST00000441958 109 ntBASIC-0.06□□□□□ -2.42
CISHQ9NSE2 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.06□□□□□ -2.42
CISHQ9NSE2 MIR2115-201ENST00000516657 100 ntBASIC-0.06□□□□□ -2.42
CISHQ9NSE2 RNA5SP480-201ENST00000516840 109 ntBASIC-0.06□□□□□ -2.42
CISHQ9NSE2 RNA5SP94-201ENST00000516917 108 ntBASIC-0.06□□□□□ -2.42
CISHQ9NSE2 AC026371.1-201ENST00000551867 419 ntBASIC-0.06□□□□□ -2.42
CISHQ9NSE2 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-0.06□□□□□ -2.42
CISHQ9NSE2 POLR3GP2-201ENST00000588366 668 ntBASIC-0.06□□□□□ -2.42
CISHQ9NSE2 AC012433.1-201ENST00000588916 398 ntBASIC-0.06□□□□□ -2.42
CISHQ9NSE2 SNORA25.18-201ENST00000607153 114 ntBASIC-0.06□□□□□ -2.42
CISHQ9NSE2 AL357075.2-201ENST00000614906 189 ntBASIC-0.06□□□□□ -2.42
CISHQ9NSE2 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.06□□□□□ -2.42
CISHQ9NSE2 AC104260.1-201ENST00000616660 539 ntBASIC-0.06□□□□□ -2.42
CISHQ9NSE2 MIR411-201ENST00000362239 96 ntBASIC-0.07□□□□□ -2.42
CISHQ9NSE2 RNU6-454P-201ENST00000364292 107 ntBASIC-0.07□□□□□ -2.42
CISHQ9NSE2 RNU4-66P-201ENST00000365199 138 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 194.6 ms