Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 Y_RNA.100-201ENST00000363141 102 ntBASIC-2.32□□□□□ -2.78
SMCO4Q9NRQ5 MTND2P9-201ENST00000422293 931 ntBASIC-2.32□□□□□ -2.78
SMCO4Q9NRQ5 ZNF736P7Y-201ENST00000425158 820 ntBASIC-2.32□□□□□ -2.78
SMCO4Q9NRQ5 SNAP23P1-201ENST00000433229 246 ntBASIC-2.32□□□□□ -2.78
SMCO4Q9NRQ5 MTCO3P8-201ENST00000453691 755 ntBASIC-2.32□□□□□ -2.78
SMCO4Q9NRQ5 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-2.32□□□□□ -2.78
SMCO4Q9NRQ5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-2.32□□□□□ -2.78
SMCO4Q9NRQ5 RNU6-150P-201ENST00000516237 95 ntBASIC-2.32□□□□□ -2.78
SMCO4Q9NRQ5 SNORD38.3-201ENST00000516599 73 ntBASIC-2.32□□□□□ -2.78
SMCO4Q9NRQ5 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-2.32□□□□□ -2.78
SMCO4Q9NRQ5 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-2.32□□□□□ -2.78
SMCO4Q9NRQ5 MIR548AR-201ENST00000582191 57 ntBASIC-2.32□□□□□ -2.78
SMCO4Q9NRQ5 AC138207.3-201ENST00000585289 166 ntBASIC-2.32□□□□□ -2.78
SMCO4Q9NRQ5 AP000811.1-201ENST00000603803 651 ntBASIC-2.32□□□□□ -2.78
SMCO4Q9NRQ5 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-2.32□□□□□ -2.78
SMCO4Q9NRQ5 MTND5P18-201ENST00000445624 1801 ntBASIC-2.33□□□□□ -2.78
SMCO4Q9NRQ5 RNU6-289P-201ENST00000364093 107 ntBASIC-2.33□□□□□ -2.78
SMCO4Q9NRQ5 SNORD28B-201ENST00000390993 75 ntBASIC-2.33□□□□□ -2.78
SMCO4Q9NRQ5 AC068587.4-201ENST00000533893 186 ntBASIC-2.33□□□□□ -2.78
SMCO4Q9NRQ5 AL157687.1-201ENST00000554853 619 ntBASIC-2.33□□□□□ -2.78
SMCO4Q9NRQ5 AL157770.1-201ENST00000623049 439 ntBASIC-2.33□□□□□ -2.78
SMCO4Q9NRQ5 Y_RNA.42-201ENST00000362660 108 ntBASIC-2.34□□□□□ -2.78
SMCO4Q9NRQ5 RNU6-1336P-201ENST00000383886 109 ntBASIC-2.34□□□□□ -2.78
SMCO4Q9NRQ5 SNORD65.1-201ENST00000390889 71 ntBASIC-2.34□□□□□ -2.78
SMCO4Q9NRQ5 AL390729.2-201ENST00000416137 156 ntBASIC-2.34□□□□□ -2.78
SMCO4Q9NRQ5 AC026414.1-201ENST00000504046 698 ntBASIC-2.34□□□□□ -2.78
SMCO4Q9NRQ5 AL358944.1-201ENST00000528537 144 ntBASIC-2.34□□□□□ -2.78
SMCO4Q9NRQ5 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-2.34□□□□□ -2.78
SMCO4Q9NRQ5 MIR3179-1-201ENST00000578940 84 ntBASIC-2.34□□□□□ -2.78
SMCO4Q9NRQ5 MIR3179-2-201ENST00000579107 84 ntBASIC-2.34□□□□□ -2.78
SMCO4Q9NRQ5 MIR3179-3-201ENST00000579566 84 ntBASIC-2.34□□□□□ -2.78
SMCO4Q9NRQ5 MIR3179-4-201ENST00000617599 84 ntBASIC-2.34□□□□□ -2.78
SMCO4Q9NRQ5 SNORA43.4-201ENST00000629559 138 ntBASIC-2.34□□□□□ -2.78
SMCO4Q9NRQ5 Y_RNA.295-201ENST00000364918 102 ntBASIC-2.35□□□□□ -2.79
SMCO4Q9NRQ5 Y_RNA.452-201ENST00000384202 108 ntBASIC-2.35□□□□□ -2.79
SMCO4Q9NRQ5 Y_RNA.498-201ENST00000384460 102 ntBASIC-2.35□□□□□ -2.79
SMCO4Q9NRQ5 SNORD56B-201ENST00000384713 71 ntBASIC-2.35□□□□□ -2.79
SMCO4Q9NRQ5 MIR9-2-201ENST00000384838 87 ntBASIC-2.35□□□□□ -2.79
SMCO4Q9NRQ5 AL031779.1-201ENST00000415663 330 ntBASIC-2.35□□□□□ -2.79
SMCO4Q9NRQ5 MTCO3P19-201ENST00000415864 321 ntBASIC-2.35□□□□□ -2.79
SMCO4Q9NRQ5 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-2.35□□□□□ -2.79
SMCO4Q9NRQ5 RNU7-172P-201ENST00000517125 64 ntBASIC-2.35□□□□□ -2.79
SMCO4Q9NRQ5 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-2.35□□□□□ -2.79
SMCO4Q9NRQ5 AC107905.1-201ENST00000616204 426 ntBASIC-2.35□□□□□ -2.79
SMCO4Q9NRQ5 AC091948.2-201ENST00000636510 279 ntBASIC-2.35□□□□□ -2.79
SMCO4Q9NRQ5 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-2.36□□□□□ -2.79
SMCO4Q9NRQ5 SNORD115-44-201ENST00000365391 82 ntBASIC-2.36□□□□□ -2.79
SMCO4Q9NRQ5 SNORD51.1-201ENST00000365405 77 ntBASIC-2.36□□□□□ -2.79
SMCO4Q9NRQ5 RNU2-42P-201ENST00000410697 113 ntBASIC-2.36□□□□□ -2.79
SMCO4Q9NRQ5 AC092447.3-201ENST00000426027 686 ntBASIC-2.36□□□□□ -2.79
SMCO4Q9NRQ5 AL358934.1-201ENST00000432346 324 ntBASIC-2.36□□□□□ -2.79
SMCO4Q9NRQ5 ZNF736P8Y-201ENST00000451913 669 ntBASIC-2.36□□□□□ -2.79
SMCO4Q9NRQ5 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-2.36□□□□□ -2.79
SMCO4Q9NRQ5 RNU6-1265P-201ENST00000516342 103 ntBASIC-2.36□□□□□ -2.79
SMCO4Q9NRQ5 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-2.36□□□□□ -2.79
SMCO4Q9NRQ5 AP000907.4-201ENST00000604143 237 ntBASIC-2.36□□□□□ -2.79
SMCO4Q9NRQ5 AC069431.2-201ENST00000604149 1099 ntBASIC-2.36□□□□□ -2.79
SMCO4Q9NRQ5 AF250324.2-201ENST00000608299 610 ntBASIC-2.36□□□□□ -2.79
SMCO4Q9NRQ5 RNU5E-6P-201ENST00000365574 115 ntBASIC-2.37□□□□□ -2.79
SMCO4Q9NRQ5 SNORA51.10-201ENST00000384418 136 ntBASIC-2.37□□□□□ -2.79
SMCO4Q9NRQ5 MIR516B1-201ENST00000385211 90 ntBASIC-2.37□□□□□ -2.79
SMCO4Q9NRQ5 SNORD64-201ENST00000386683 67 ntBASIC-2.37□□□□□ -2.79
SMCO4Q9NRQ5 AP000542.1-201ENST00000448473 371 ntBASIC-2.37□□□□□ -2.79
SMCO4Q9NRQ5 AL031274.1-201ENST00000450334 232 ntBASIC-2.37□□□□□ -2.79
SMCO4Q9NRQ5 RNU7-182P-201ENST00000459009 62 ntBASIC-2.37□□□□□ -2.79
SMCO4Q9NRQ5 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-2.37□□□□□ -2.79
SMCO4Q9NRQ5 MIR8066-201ENST00000617280 78 ntBASIC-2.37□□□□□ -2.79
SMCO4Q9NRQ5 AC006435.5-201ENST00000624486 112 ntBASIC-2.37□□□□□ -2.79
SMCO4Q9NRQ5 MIR382-201ENST00000637119 76 ntBASIC-2.37□□□□□ -2.79
SMCO4Q9NRQ5 SNORD115-42-201ENST00000364273 82 ntBASIC-2.38□□□□□ -2.79
SMCO4Q9NRQ5 RNU4-66P-201ENST00000365199 138 ntBASIC-2.38□□□□□ -2.79
SMCO4Q9NRQ5 RNU6-431P-201ENST00000383874 107 ntBASIC-2.38□□□□□ -2.79
SMCO4Q9NRQ5 SNORA75.4-201ENST00000391278 119 ntBASIC-2.38□□□□□ -2.79
SMCO4Q9NRQ5 SNORD57-201ENST00000448188 72 ntBASIC-2.38□□□□□ -2.79
SMCO4Q9NRQ5 AC091959.1-201ENST00000495857 238 ntBASIC-2.38□□□□□ -2.79
SMCO4Q9NRQ5 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-2.38□□□□□ -2.79
SMCO4Q9NRQ5 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-2.38□□□□□ -2.79
SMCO4Q9NRQ5 AC012467.1-201ENST00000607740 256 ntBASIC-2.38□□□□□ -2.79
SMCO4Q9NRQ5 AC072039.2-201ENST00000608883 439 ntBASIC-2.38□□□□□ -2.79
SMCO4Q9NRQ5 AC073869.9-201ENST00000641610 120 ntBASIC-2.38□□□□□ -2.79
SMCO4Q9NRQ5 SNORD68-201ENST00000363214 84 ntBASIC-2.39□□□□□ -2.79
SMCO4Q9NRQ5 RNU6-960P-201ENST00000364056 120 ntBASIC-2.39□□□□□ -2.79
SMCO4Q9NRQ5 SSR1P2-201ENST00000415208 787 ntBASIC-2.39□□□□□ -2.79
SMCO4Q9NRQ5 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-2.39□□□□□ -2.79
SMCO4Q9NRQ5 SNRPGP10-201ENST00000432323 225 ntBASIC-2.39□□□□□ -2.79
SMCO4Q9NRQ5 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-2.39□□□□□ -2.79
SMCO4Q9NRQ5 MIR6740-201ENST00000618268 113 ntBASIC-2.39□□□□□ -2.79
SMCO4Q9NRQ5 AL445523.1-201ENST00000451184 1362 ntBASIC-2.39□□□□□ -2.79
SMCO4Q9NRQ5 RNU6-1175P-201ENST00000365200 107 ntBASIC-2.4□□□□□ -2.79
SMCO4Q9NRQ5 MIR570-201ENST00000384917 97 ntBASIC-2.4□□□□□ -2.79
SMCO4Q9NRQ5 MIR517B-201ENST00000385102 67 ntBASIC-2.4□□□□□ -2.79
SMCO4Q9NRQ5 snoU13.6-201ENST00000458785 104 ntBASIC-2.4□□□□□ -2.79
SMCO4Q9NRQ5 AC011352.1-201ENST00000512300 793 ntBASIC-2.4□□□□□ -2.79
SMCO4Q9NRQ5 Y_RNA.167-201ENST00000363735 109 ntBASIC-2.41□□□□□ -2.8
SMCO4Q9NRQ5 Y_RNA.374-201ENST00000365606 101 ntBASIC-2.41□□□□□ -2.8
SMCO4Q9NRQ5 RPS29P13-201ENST00000402041 169 ntBASIC-2.41□□□□□ -2.8
SMCO4Q9NRQ5 AC244505.6-201ENST00000452829 130 ntBASIC-2.41□□□□□ -2.8
SMCO4Q9NRQ5 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-2.41□□□□□ -2.8
SMCO4Q9NRQ5 AC004223.4-201ENST00000612426 332 ntBASIC-2.41□□□□□ -2.8
SMCO4Q9NRQ5 MTND1P7-201ENST00000632801 297 ntBASIC-2.41□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms