Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AL121890.5-201ENST00000620848 304 ntBASIC1.19□□□□□ -2.22
NXF3Q9H4D5 MIR3674-201ENST00000636576 68 ntBASIC1.19□□□□□ -2.22
NXF3Q9H4D5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
NXF3Q9H4D5 Y_RNA.252-201ENST00000364556 101 ntBASIC1.18□□□□□ -2.22
NXF3Q9H4D5 RNU6-867P-201ENST00000364956 107 ntBASIC1.18□□□□□ -2.22
NXF3Q9H4D5 RNU6-1080P-201ENST00000383982 107 ntBASIC1.18□□□□□ -2.22
NXF3Q9H4D5 RNU6-1310P-201ENST00000384153 107 ntBASIC1.18□□□□□ -2.22
NXF3Q9H4D5 RNU6-708P-201ENST00000384217 107 ntBASIC1.18□□□□□ -2.22
NXF3Q9H4D5 RNU6-939P-201ENST00000384634 107 ntBASIC1.18□□□□□ -2.22
NXF3Q9H4D5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
NXF3Q9H4D5 RNA5SP475-201ENST00000410568 110 ntBASIC1.18□□□□□ -2.22
NXF3Q9H4D5 AC022028.1-201ENST00000412054 408 ntBASIC1.18□□□□□ -2.22
NXF3Q9H4D5 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.18□□□□□ -2.22
NXF3Q9H4D5 CHEK2P4-201ENST00000450340 246 ntBASIC1.18□□□□□ -2.22
NXF3Q9H4D5 RPS26P45-201ENST00000471748 340 ntBASIC1.18□□□□□ -2.22
NXF3Q9H4D5 AL163195.1-201ENST00000496941 348 ntBASIC1.18□□□□□ -2.22
NXF3Q9H4D5 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.18□□□□□ -2.22
NXF3Q9H4D5 RNU6-976P-201ENST00000516086 111 ntBASIC1.18□□□□□ -2.22
NXF3Q9H4D5 RNU7-99P-201ENST00000516271 62 ntBASIC1.18□□□□□ -2.22
NXF3Q9H4D5 RNU7-128P-201ENST00000517247 62 ntBASIC1.18□□□□□ -2.22
NXF3Q9H4D5 MIR4452-201ENST00000583004 71 ntBASIC1.18□□□□□ -2.22
NXF3Q9H4D5 VN1R91P-201ENST00000594377 169 ntBASIC1.18□□□□□ -2.22
NXF3Q9H4D5 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
NXF3Q9H4D5 MIR302D-201ENST00000362275 68 ntBASIC1.17□□□□□ -2.22
NXF3Q9H4D5 Y_RNA.5-201ENST00000362334 102 ntBASIC1.17□□□□□ -2.22
NXF3Q9H4D5 RNU6-454P-201ENST00000364292 107 ntBASIC1.17□□□□□ -2.22
NXF3Q9H4D5 RNU1-93P-201ENST00000364704 169 ntBASIC1.17□□□□□ -2.22
NXF3Q9H4D5 Y_RNA.315-201ENST00000365117 102 ntBASIC1.17□□□□□ -2.22
NXF3Q9H4D5 RNU1-115P-201ENST00000365329 160 ntBASIC1.17□□□□□ -2.22
NXF3Q9H4D5 SNORA20B-201ENST00000384220 132 ntBASIC1.17□□□□□ -2.22
NXF3Q9H4D5 Y_RNA.496-201ENST00000384444 101 ntBASIC1.17□□□□□ -2.22
NXF3Q9H4D5 Y_RNA.579-201ENST00000390939 94 ntBASIC1.17□□□□□ -2.22
NXF3Q9H4D5 RNA5SP323-201ENST00000391094 133 ntBASIC1.17□□□□□ -2.22
NXF3Q9H4D5 AL355796.1-201ENST00000406706 323 ntBASIC1.17□□□□□ -2.22
NXF3Q9H4D5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.17□□□□□ -2.22
NXF3Q9H4D5 AC005002.2-201ENST00000438228 269 ntBASIC1.17□□□□□ -2.22
NXF3Q9H4D5 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.17□□□□□ -2.22
NXF3Q9H4D5 AC073910.1-201ENST00000445047 438 ntBASIC1.17□□□□□ -2.22
NXF3Q9H4D5 FCF1P4-201ENST00000448326 183 ntBASIC1.17□□□□□ -2.22
NXF3Q9H4D5 MRPS10P1-201ENST00000448483 130 ntBASIC1.17□□□□□ -2.22
NXF3Q9H4D5 RNU6-408P-201ENST00000515910 100 ntBASIC1.17□□□□□ -2.22
NXF3Q9H4D5 RNU6-1012P-201ENST00000516606 109 ntBASIC1.17□□□□□ -2.22
NXF3Q9H4D5 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.17□□□□□ -2.22
NXF3Q9H4D5 C8orf59P2-201ENST00000603441 271 ntBASIC1.17□□□□□ -2.22
NXF3Q9H4D5 AL133255.1-201ENST00000606374 441 ntBASIC1.17□□□□□ -2.22
NXF3Q9H4D5 AC005828.6-201ENST00000606610 232 ntBASIC1.17□□□□□ -2.22
NXF3Q9H4D5 AC104985.2-201ENST00000620598 500 ntBASIC1.17□□□□□ -2.22
NXF3Q9H4D5 MIR4272-201ENST00000635924 64 ntBASIC1.17□□□□□ -2.22
NXF3Q9H4D5 Y_RNA.27-201ENST00000362540 103 ntBASIC1.16□□□□□ -2.22
NXF3Q9H4D5 RNU6-271P-201ENST00000363858 105 ntBASIC1.16□□□□□ -2.22
NXF3Q9H4D5 RNU6-961P-201ENST00000363893 105 ntBASIC1.16□□□□□ -2.22
NXF3Q9H4D5 Y_RNA.197-201ENST00000364004 102 ntBASIC1.16□□□□□ -2.22
NXF3Q9H4D5 RNU5E-4P-201ENST00000364931 120 ntBASIC1.16□□□□□ -2.22
NXF3Q9H4D5 RNU6-926P-201ENST00000384075 107 ntBASIC1.16□□□□□ -2.22
NXF3Q9H4D5 Y_RNA.509-201ENST00000384506 99 ntBASIC1.16□□□□□ -2.22
NXF3Q9H4D5 RNU6-1065P-201ENST00000384513 106 ntBASIC1.16□□□□□ -2.22
NXF3Q9H4D5 MIR628-201ENST00000385229 95 ntBASIC1.16□□□□□ -2.22
NXF3Q9H4D5 SNORD78.2-201ENST00000391076 69 ntBASIC1.16□□□□□ -2.22
NXF3Q9H4D5 MRPL35P1-201ENST00000404272 572 ntBASIC1.16□□□□□ -2.22
NXF3Q9H4D5 AC018865.2-201ENST00000423631 129 ntBASIC1.16□□□□□ -2.22
NXF3Q9H4D5 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.16□□□□□ -2.22
NXF3Q9H4D5 AL606517.2-201ENST00000442855 241 ntBASIC1.16□□□□□ -2.22
NXF3Q9H4D5 RPS27P1-201ENST00000450552 247 ntBASIC1.16□□□□□ -2.22
NXF3Q9H4D5 SUMO1P2-201ENST00000452524 304 ntBASIC1.16□□□□□ -2.22
NXF3Q9H4D5 snoU13.27-201ENST00000459278 104 ntBASIC1.16□□□□□ -2.22
NXF3Q9H4D5 AC010469.2-201ENST00000496412 480 ntBASIC1.16□□□□□ -2.22
NXF3Q9H4D5 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.16□□□□□ -2.22
NXF3Q9H4D5 MIR4438-201ENST00000585271 93 ntBASIC1.16□□□□□ -2.22
NXF3Q9H4D5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
NXF3Q9H4D5 U6.115-201ENST00000636045 103 ntBASIC1.16□□□□□ -2.22
NXF3Q9H4D5 SNORD114-7-201ENST00000362520 77 ntBASIC1.15□□□□□ -2.23
NXF3Q9H4D5 SNORA27.1-201ENST00000362604 124 ntBASIC1.15□□□□□ -2.23
NXF3Q9H4D5 Y_RNA.116-201ENST00000363292 103 ntBASIC1.15□□□□□ -2.23
NXF3Q9H4D5 Y_RNA.243-201ENST00000364481 109 ntBASIC1.15□□□□□ -2.23
NXF3Q9H4D5 SNORA4.2-201ENST00000365313 147 ntBASIC1.15□□□□□ -2.23
NXF3Q9H4D5 Y_RNA.431-201ENST00000384086 102 ntBASIC1.15□□□□□ -2.23
NXF3Q9H4D5 RNU6-1186P-201ENST00000410429 97 ntBASIC1.15□□□□□ -2.23
NXF3Q9H4D5 MTCO3P19-201ENST00000415864 321 ntBASIC1.15□□□□□ -2.23
NXF3Q9H4D5 AC027119.1-201ENST00000440877 241 ntBASIC1.15□□□□□ -2.23
NXF3Q9H4D5 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.15□□□□□ -2.23
NXF3Q9H4D5 AC079140.2-201ENST00000506193 142 ntBASIC1.15□□□□□ -2.23
NXF3Q9H4D5 AC023157.2-201ENST00000540596 141 ntBASIC1.15□□□□□ -2.23
NXF3Q9H4D5 AC055872.1-201ENST00000570978 278 ntBASIC1.15□□□□□ -2.23
NXF3Q9H4D5 AC022217.4-201ENST00000604389 163 ntBASIC1.15□□□□□ -2.23
NXF3Q9H4D5 AL080274.1-201ENST00000605565 220 ntBASIC1.15□□□□□ -2.23
NXF3Q9H4D5 SNORD114-21-201ENST00000606412 72 ntBASIC1.15□□□□□ -2.23
NXF3Q9H4D5 AL138825.1-201ENST00000618587 192 ntBASIC1.15□□□□□ -2.23
NXF3Q9H4D5 MIR8063-201ENST00000621930 81 ntBASIC1.15□□□□□ -2.23
NXF3Q9H4D5 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
NXF3Q9H4D5 AC100821.1-201ENST00000523153 2479 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
NXF3Q9H4D5 Y_RNA.112-201ENST00000363250 102 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 SNORD1A-201ENST00000364968 72 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 Y_RNA.361-201ENST00000365515 120 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 Y_RNA.395-201ENST00000383945 109 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 Y_RNA.419-201ENST00000384041 102 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 RNU6-950P-201ENST00000384651 107 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 MIR222-201ENST00000384992 110 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 MIR618-201ENST00000385287 98 ntBASIC1.14□□□□□ -2.23
NXF3Q9H4D5 RNA5SP109-201ENST00000391010 116 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms