Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.12□□□□□ -2.39
VCX3BQ9H321 MIR410-201ENST00000362222 80 ntBASIC0.12□□□□□ -2.39
VCX3BQ9H321 Y_RNA.338-201ENST00000365320 114 ntBASIC0.12□□□□□ -2.39
VCX3BQ9H321 VTRNA1-3-201ENST00000365645 89 ntBASIC0.12□□□□□ -2.39
VCX3BQ9H321 Y_RNA.490-201ENST00000384413 102 ntBASIC0.12□□□□□ -2.39
VCX3BQ9H321 SNORA2B-201ENST00000384583 137 ntBASIC0.12□□□□□ -2.39
VCX3BQ9H321 RNU6-613P-201ENST00000410412 108 ntBASIC0.12□□□□□ -2.39
VCX3BQ9H321 RNU6-1068P-201ENST00000410958 103 ntBASIC0.12□□□□□ -2.39
VCX3BQ9H321 AL354751.2-201ENST00000415471 210 ntBASIC0.12□□□□□ -2.39
VCX3BQ9H321 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.12□□□□□ -2.39
VCX3BQ9H321 SUMO1P2-201ENST00000452524 304 ntBASIC0.12□□□□□ -2.39
VCX3BQ9H321 ELOCP24-201ENST00000456370 334 ntBASIC0.12□□□□□ -2.39
VCX3BQ9H321 RPS29P1-201ENST00000465274 159 ntBASIC0.12□□□□□ -2.39
VCX3BQ9H321 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.12□□□□□ -2.39
VCX3BQ9H321 AC093027.1-201ENST00000546698 429 ntBASIC0.12□□□□□ -2.39
VCX3BQ9H321 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.12□□□□□ -2.39
VCX3BQ9H321 AL158211.1-201ENST00000566763 763 ntBASIC0.12□□□□□ -2.39
VCX3BQ9H321 MIR5000-201ENST00000577717 103 ntBASIC0.12□□□□□ -2.39
VCX3BQ9H321 AC092954.2-201ENST00000609103 430 ntBASIC0.12□□□□□ -2.39
VCX3BQ9H321 AC019193.3-201ENST00000609144 554 ntBASIC0.12□□□□□ -2.39
VCX3BQ9H321 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.12□□□□□ -2.39
VCX3BQ9H321 RMST_2.1-201ENST00000617263 136 ntBASIC0.12□□□□□ -2.39
VCX3BQ9H321 ZNF299P-201ENST00000406845 1804 ntBASIC0.12□□□□□ -2.39
VCX3BQ9H321 MIR1-1-201ENST00000362147 71 ntBASIC0.11□□□□□ -2.39
VCX3BQ9H321 RNU6-454P-201ENST00000364292 107 ntBASIC0.11□□□□□ -2.39
VCX3BQ9H321 RNU6-306P-201ENST00000384617 107 ntBASIC0.11□□□□□ -2.39
VCX3BQ9H321 MIR329-1-201ENST00000385028 80 ntBASIC0.11□□□□□ -2.39
VCX3BQ9H321 AL390729.2-201ENST00000416137 156 ntBASIC0.11□□□□□ -2.39
VCX3BQ9H321 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.11□□□□□ -2.39
VCX3BQ9H321 AC005534.2-201ENST00000431047 433 ntBASIC0.11□□□□□ -2.39
VCX3BQ9H321 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.11□□□□□ -2.39
VCX3BQ9H321 SNORD123-201ENST00000459473 70 ntBASIC0.11□□□□□ -2.39
VCX3BQ9H321 RNU6-496P-201ENST00000516145 99 ntBASIC0.11□□□□□ -2.39
VCX3BQ9H321 Y_RNA.706-201ENST00000516933 99 ntBASIC0.11□□□□□ -2.39
VCX3BQ9H321 LRRC34P1-201ENST00000542742 915 ntBASIC0.11□□□□□ -2.39
VCX3BQ9H321 AC145350.1-201ENST00000567426 208 ntBASIC0.11□□□□□ -2.39
VCX3BQ9H321 MIR4769-201ENST00000584126 77 ntBASIC0.11□□□□□ -2.39
VCX3BQ9H321 AL355073.2-201ENST00000612106 557 ntBASIC0.11□□□□□ -2.39
VCX3BQ9H321 AC008133.2-201ENST00000624540 351 ntBASIC0.11□□□□□ -2.39
VCX3BQ9H321 MIR18A-201ENST00000362310 71 ntBASIC0.1□□□□□ -2.39
VCX3BQ9H321 SNORD114-7-201ENST00000362520 77 ntBASIC0.1□□□□□ -2.39
VCX3BQ9H321 RNU6-1085P-201ENST00000363576 107 ntBASIC0.1□□□□□ -2.39
VCX3BQ9H321 Y_RNA.168-201ENST00000363740 102 ntBASIC0.1□□□□□ -2.39
VCX3BQ9H321 RNU6-595P-201ENST00000363944 107 ntBASIC0.1□□□□□ -2.39
VCX3BQ9H321 RNU4-45P-201ENST00000365469 141 ntBASIC0.1□□□□□ -2.39
VCX3BQ9H321 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.1□□□□□ -2.39
VCX3BQ9H321 Y_RNA.615-201ENST00000410769 117 ntBASIC0.1□□□□□ -2.39
VCX3BQ9H321 EIF1P2-201ENST00000428233 350 ntBASIC0.1□□□□□ -2.39
VCX3BQ9H321 NDUFA4P2-201ENST00000489989 244 ntBASIC0.1□□□□□ -2.39
VCX3BQ9H321 AC074133.1-201ENST00000515696 183 ntBASIC0.1□□□□□ -2.39
VCX3BQ9H321 RNU6-256P-201ENST00000516747 97 ntBASIC0.1□□□□□ -2.39
VCX3BQ9H321 AC090617.3-201ENST00000573670 475 ntBASIC0.1□□□□□ -2.39
VCX3BQ9H321 AC104695.3-201ENST00000604052 296 ntBASIC0.1□□□□□ -2.39
VCX3BQ9H321 AC100812.1-201ENST00000607622 580 ntBASIC0.1□□□□□ -2.39
VCX3BQ9H321 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.1□□□□□ -2.39
VCX3BQ9H321 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.1□□□□□ -2.39
VCX3BQ9H321 MIR4251-201ENST00000635819 61 ntBASIC0.1□□□□□ -2.39
VCX3BQ9H321 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.09□□□□□ -2.39
VCX3BQ9H321 Y_RNA.106-201ENST00000363189 100 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 Y_RNA.212-201ENST00000364177 102 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 RNU6-596P-201ENST00000365395 98 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 SNORD114-22-201ENST00000365423 72 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 Y_RNA.361-201ENST00000365515 120 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 Y_RNA.530-201ENST00000384587 101 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 RNA5SP511-201ENST00000410487 115 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 Y_RNA.621-201ENST00000411065 96 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 DLGAP5P1-201ENST00000430307 464 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 SEPT14P3-201ENST00000439401 183 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 AL732372.2-207ENST00000445840 183 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 SEPT14P2-201ENST00000453405 183 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 snoU13.21-201ENST00000459368 105 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.09□□□□□ -2.4
VCX3BQ9H321 AC105313.1-201ENST00000509121 353 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 SEPT14P4-201ENST00000513445 186 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 MIR2115-201ENST00000516657 100 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 MTND2P38-201ENST00000522536 667 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 FO082796.1-201ENST00000523795 183 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.09□□□□□ -2.4
VCX3BQ9H321 AC018448.1-201ENST00000552843 316 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.09□□□□□ -2.4
VCX3BQ9H321 AC012433.1-201ENST00000588916 398 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 AC010525.2-201ENST00000590920 195 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 AC104260.1-201ENST00000616660 539 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 MIR6788-201ENST00000618842 66 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 AC015726.2-201ENST00000620112 122 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 MIR6513-201ENST00000621188 64 ntBASIC0.09□□□□□ -2.4
VCX3BQ9H321 Y_RNA.253-201ENST00000364562 112 ntBASIC0.08□□□□□ -2.4
VCX3BQ9H321 Y_RNA.359-201ENST00000365498 102 ntBASIC0.08□□□□□ -2.4
VCX3BQ9H321 Y_RNA.373-201ENST00000365600 103 ntBASIC0.08□□□□□ -2.4
VCX3BQ9H321 RNU6-1145P-201ENST00000384246 107 ntBASIC0.08□□□□□ -2.4
VCX3BQ9H321 MIR522-201ENST00000385071 87 ntBASIC0.08□□□□□ -2.4
VCX3BQ9H321 MIR520H-201ENST00000385126 88 ntBASIC0.08□□□□□ -2.4
VCX3BQ9H321 SNORD28B-201ENST00000390993 75 ntBASIC0.08□□□□□ -2.4
VCX3BQ9H321 MIR548J-201ENST00000408833 112 ntBASIC0.08□□□□□ -2.4
VCX3BQ9H321 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.08□□□□□ -2.4
VCX3BQ9H321 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.08□□□□□ -2.4
VCX3BQ9H321 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.08□□□□□ -2.4
VCX3BQ9H321 AC092634.7-201ENST00000621022 103 ntBASIC0.08□□□□□ -2.4
VCX3BQ9H321 AC023510.2-201ENST00000622162 746 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms