Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 AC011476.5-201ENST00000615594 130 ntBASIC1.47□□□□□ -2.17
CCDC68Q9H2F9 AL353997.5-201ENST00000618886 171 ntBASIC1.47□□□□□ -2.17
CCDC68Q9H2F9 AC005592.1-201ENST00000566527 1640 ntBASIC1.47□□□□□ -2.17
CCDC68Q9H2F9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.17
CCDC68Q9H2F9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
CCDC68Q9H2F9 RNU6-626P-201ENST00000363354 107 ntBASIC1.46□□□□□ -2.18
CCDC68Q9H2F9 Y_RNA.428-201ENST00000384078 102 ntBASIC1.46□□□□□ -2.18
CCDC68Q9H2F9 RNU6-20P-201ENST00000384106 107 ntBASIC1.46□□□□□ -2.18
CCDC68Q9H2F9 RNU6-424P-201ENST00000384367 105 ntBASIC1.46□□□□□ -2.18
CCDC68Q9H2F9 MIR320A-201ENST00000385302 82 ntBASIC1.46□□□□□ -2.18
CCDC68Q9H2F9 RNA5SP482-201ENST00000391269 118 ntBASIC1.46□□□□□ -2.18
CCDC68Q9H2F9 AL354695.1-201ENST00000427935 228 ntBASIC1.46□□□□□ -2.18
CCDC68Q9H2F9 AL049830.1-201ENST00000468034 425 ntBASIC1.46□□□□□ -2.18
CCDC68Q9H2F9 RNU6-875P-201ENST00000516488 106 ntBASIC1.46□□□□□ -2.18
CCDC68Q9H2F9 RNU6-911P-201ENST00000516523 104 ntBASIC1.46□□□□□ -2.18
CCDC68Q9H2F9 RNU6-922P-201ENST00000516753 99 ntBASIC1.46□□□□□ -2.18
CCDC68Q9H2F9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.46□□□□□ -2.18
CCDC68Q9H2F9 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.46□□□□□ -2.18
CCDC68Q9H2F9 MIR4659A-201ENST00000580269 81 ntBASIC1.46□□□□□ -2.18
CCDC68Q9H2F9 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CCDC68Q9H2F9 Y_RNA.70-201ENST00000362886 110 ntBASIC1.45□□□□□ -2.18
CCDC68Q9H2F9 RNU6-199P-201ENST00000362954 107 ntBASIC1.45□□□□□ -2.18
CCDC68Q9H2F9 Y_RNA.101-201ENST00000363154 102 ntBASIC1.45□□□□□ -2.18
CCDC68Q9H2F9 RNU1-42P-201ENST00000364033 160 ntBASIC1.45□□□□□ -2.18
CCDC68Q9H2F9 Y_RNA.356-201ENST00000365475 113 ntBASIC1.45□□□□□ -2.18
CCDC68Q9H2F9 RNU6-1009P-201ENST00000390996 107 ntBASIC1.45□□□□□ -2.18
CCDC68Q9H2F9 SNORA67.5-201ENST00000391036 107 ntBASIC1.45□□□□□ -2.18
CCDC68Q9H2F9 RNU5A-5P-201ENST00000411054 116 ntBASIC1.45□□□□□ -2.18
CCDC68Q9H2F9 SNRPGP13-201ENST00000442212 177 ntBASIC1.45□□□□□ -2.18
CCDC68Q9H2F9 Y_RNA.632-201ENST00000459189 102 ntBASIC1.45□□□□□ -2.18
CCDC68Q9H2F9 RNU7-12P-201ENST00000516030 62 ntBASIC1.45□□□□□ -2.18
CCDC68Q9H2F9 RNU6-1012P-201ENST00000516606 109 ntBASIC1.45□□□□□ -2.18
CCDC68Q9H2F9 SNORD116.3-201ENST00000517176 78 ntBASIC1.45□□□□□ -2.18
CCDC68Q9H2F9 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.45□□□□□ -2.18
CCDC68Q9H2F9 AC015720.1-201ENST00000565251 277 ntBASIC1.45□□□□□ -2.18
CCDC68Q9H2F9 MIR4769-201ENST00000584126 77 ntBASIC1.45□□□□□ -2.18
CCDC68Q9H2F9 AL513534.2-201ENST00000603836 250 ntBASIC1.45□□□□□ -2.18
CCDC68Q9H2F9 AC240442.1-201ENST00000616055 283 ntBASIC1.45□□□□□ -2.18
CCDC68Q9H2F9 RNA5SP327-201ENST00000362494 101 ntBASIC1.44□□□□□ -2.18
CCDC68Q9H2F9 Y_RNA.187-201ENST00000363918 113 ntBASIC1.44□□□□□ -2.18
CCDC68Q9H2F9 RNU6-324P-201ENST00000363957 106 ntBASIC1.44□□□□□ -2.18
CCDC68Q9H2F9 RNU6-60P-201ENST00000364792 103 ntBASIC1.44□□□□□ -2.18
CCDC68Q9H2F9 MIR764-201ENST00000390811 85 ntBASIC1.44□□□□□ -2.18
CCDC68Q9H2F9 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.44□□□□□ -2.18
CCDC68Q9H2F9 AL031003.1-201ENST00000404229 172 ntBASIC1.44□□□□□ -2.18
CCDC68Q9H2F9 RNU2-54P-201ENST00000410299 190 ntBASIC1.44□□□□□ -2.18
CCDC68Q9H2F9 RNA5SP511-201ENST00000410487 115 ntBASIC1.44□□□□□ -2.18
CCDC68Q9H2F9 RNU6-1337P-201ENST00000516525 95 ntBASIC1.44□□□□□ -2.18
CCDC68Q9H2F9 AC006600.1-201ENST00000572529 153 ntBASIC1.44□□□□□ -2.18
CCDC68Q9H2F9 MIR4801-201ENST00000582704 82 ntBASIC1.44□□□□□ -2.18
CCDC68Q9H2F9 VN1R91P-201ENST00000594377 169 ntBASIC1.44□□□□□ -2.18
CCDC68Q9H2F9 AC138305.3-201ENST00000624988 240 ntBASIC1.44□□□□□ -2.18
CCDC68Q9H2F9 AC068647.2-201ENST00000637380 353 ntBASIC1.44□□□□□ -2.18
CCDC68Q9H2F9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CCDC68Q9H2F9 Y_RNA.27-201ENST00000362540 103 ntBASIC1.43□□□□□ -2.18
CCDC68Q9H2F9 RNU6-457P-201ENST00000363999 107 ntBASIC1.43□□□□□ -2.18
CCDC68Q9H2F9 SNORA25.8-201ENST00000364831 128 ntBASIC1.43□□□□□ -2.18
CCDC68Q9H2F9 RNU6-708P-201ENST00000384217 107 ntBASIC1.43□□□□□ -2.18
CCDC68Q9H2F9 Y_RNA.463-201ENST00000384271 102 ntBASIC1.43□□□□□ -2.18
CCDC68Q9H2F9 Y_RNA.621-201ENST00000411065 96 ntBASIC1.43□□□□□ -2.18
CCDC68Q9H2F9 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.43□□□□□ -2.18
CCDC68Q9H2F9 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.43□□□□□ -2.18
CCDC68Q9H2F9 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.43□□□□□ -2.18
CCDC68Q9H2F9 DYNLT3P2-201ENST00000442517 295 ntBASIC1.43□□□□□ -2.18
CCDC68Q9H2F9 AC093850.1-201ENST00000454121 251 ntBASIC1.43□□□□□ -2.18
CCDC68Q9H2F9 FGF7P4-201ENST00000509595 295 ntBASIC1.43□□□□□ -2.18
CCDC68Q9H2F9 RNU6-155P-201ENST00000516347 100 ntBASIC1.43□□□□□ -2.18
CCDC68Q9H2F9 AL358944.1-201ENST00000528537 144 ntBASIC1.43□□□□□ -2.18
CCDC68Q9H2F9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CCDC68Q9H2F9 Y_RNA.146-201ENST00000363549 102 ntBASIC1.42□□□□□ -2.18
CCDC68Q9H2F9 RNU4-13P-201ENST00000364019 141 ntBASIC1.42□□□□□ -2.18
CCDC68Q9H2F9 Y_RNA.361-201ENST00000365515 120 ntBASIC1.42□□□□□ -2.18
CCDC68Q9H2F9 Y_RNA.529-201ENST00000384586 119 ntBASIC1.42□□□□□ -2.18
CCDC68Q9H2F9 AL354751.2-201ENST00000415471 210 ntBASIC1.42□□□□□ -2.18
CCDC68Q9H2F9 AC236972.2-201ENST00000434979 310 ntBASIC1.42□□□□□ -2.18
CCDC68Q9H2F9 RPEP5-201ENST00000441137 268 ntBASIC1.42□□□□□ -2.18
CCDC68Q9H2F9 MTND5P20-201ENST00000448677 143 ntBASIC1.42□□□□□ -2.18
CCDC68Q9H2F9 HSPE1P13-201ENST00000451143 297 ntBASIC1.42□□□□□ -2.18
CCDC68Q9H2F9 SNORD19B-201ENST00000459623 84 ntBASIC1.42□□□□□ -2.18
CCDC68Q9H2F9 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.42□□□□□ -2.18
CCDC68Q9H2F9 MIR548S-201ENST00000581352 82 ntBASIC1.42□□□□□ -2.18
CCDC68Q9H2F9 U6.92-201ENST00000636464 89 ntBASIC1.42□□□□□ -2.18
CCDC68Q9H2F9 U8.1-201ENST00000362843 134 ntBASIC1.41□□□□□ -2.18
CCDC68Q9H2F9 RNU4-41P-201ENST00000364426 143 ntBASIC1.41□□□□□ -2.18
CCDC68Q9H2F9 Y_RNA.263-201ENST00000364659 114 ntBASIC1.41□□□□□ -2.18
CCDC68Q9H2F9 Y_RNA.446-201ENST00000384178 104 ntBASIC1.41□□□□□ -2.18
CCDC68Q9H2F9 RNU6-939P-201ENST00000384634 107 ntBASIC1.41□□□□□ -2.18
CCDC68Q9H2F9 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC68Q9H2F9 AL162725.1-201ENST00000435405 301 ntBASIC1.41□□□□□ -2.18
CCDC68Q9H2F9 AL163540.1-201ENST00000485382 386 ntBASIC1.41□□□□□ -2.18
CCDC68Q9H2F9 Y_RNA.661-201ENST00000516003 99 ntBASIC1.41□□□□□ -2.18
CCDC68Q9H2F9 RNU6-322P-201ENST00000516010 103 ntBASIC1.41□□□□□ -2.18
CCDC68Q9H2F9 RNU6-507P-201ENST00000516045 100 ntBASIC1.41□□□□□ -2.18
CCDC68Q9H2F9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.41□□□□□ -2.18
CCDC68Q9H2F9 Z98949.2-201ENST00000440996 144 ntBASIC1.4□□□□□ -2.19
CCDC68Q9H2F9 CHEK2P4-201ENST00000450340 246 ntBASIC1.4□□□□□ -2.19
CCDC68Q9H2F9 Y_RNA.702-201ENST00000516843 96 ntBASIC1.4□□□□□ -2.19
CCDC68Q9H2F9 GHRLOS.1-201ENST00000610995 70 ntBASIC1.4□□□□□ -2.19
CCDC68Q9H2F9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CCDC68Q9H2F9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms