Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 AC073413.2-201ENST00000604332 360 ntBASIC2.8□□□□□ -1.96
CCDC113Q9H0I3 MIR3670-4-201ENST00000612260 65 ntBASIC2.8□□□□□ -1.96
CCDC113Q9H0I3 MIR548AY-201ENST00000617669 107 ntBASIC2.8□□□□□ -1.96
CCDC113Q9H0I3 AL365265.1-201ENST00000621045 234 ntBASIC2.8□□□□□ -1.96
CCDC113Q9H0I3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC113Q9H0I3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC113Q9H0I3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC113Q9H0I3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CCDC113Q9H0I3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CCDC113Q9H0I3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC113Q9H0I3 RNU6-117P-201ENST00000365415 107 ntBASIC2.79□□□□□ -1.96
CCDC113Q9H0I3 DEFA7P-201ENST00000382676 285 ntBASIC2.79□□□□□ -1.96
CCDC113Q9H0I3 RNU1-138P-201ENST00000384093 164 ntBASIC2.79□□□□□ -1.96
CCDC113Q9H0I3 MIR27B-201ENST00000385129 97 ntBASIC2.79□□□□□ -1.96
CCDC113Q9H0I3 AC007064.1-201ENST00000412238 351 ntBASIC2.79□□□□□ -1.96
CCDC113Q9H0I3 HMGB3P3-201ENST00000510526 400 ntBASIC2.79□□□□□ -1.96
CCDC113Q9H0I3 RNU7-115P-201ENST00000516433 55 ntBASIC2.79□□□□□ -1.96
CCDC113Q9H0I3 AC015720.1-201ENST00000565251 277 ntBASIC2.79□□□□□ -1.96
CCDC113Q9H0I3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC113Q9H0I3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC113Q9H0I3 AC080100.1-201ENST00000624239 5356 ntBASIC2.78□□□□□ -1.96
CCDC113Q9H0I3 RNU6-1323P-201ENST00000384025 107 ntBASIC2.78□□□□□ -1.96
CCDC113Q9H0I3 MIR597-201ENST00000384968 97 ntBASIC2.78□□□□□ -1.96
CCDC113Q9H0I3 RNU6-907P-201ENST00000390924 102 ntBASIC2.78□□□□□ -1.96
CCDC113Q9H0I3 RNA5SP210-201ENST00000391034 120 ntBASIC2.78□□□□□ -1.96
CCDC113Q9H0I3 RNA5SP465-201ENST00000391195 109 ntBASIC2.78□□□□□ -1.96
CCDC113Q9H0I3 AL117342.1-201ENST00000404861 406 ntBASIC2.78□□□□□ -1.96
CCDC113Q9H0I3 HMGN2P3-201ENST00000433603 273 ntBASIC2.78□□□□□ -1.96
CCDC113Q9H0I3 HMGN2P5-201ENST00000436882 273 ntBASIC2.78□□□□□ -1.96
CCDC113Q9H0I3 RPL23AP54-201ENST00000495129 419 ntBASIC2.78□□□□□ -1.96
CCDC113Q9H0I3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC113Q9H0I3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC113Q9H0I3 AC024995.1-201ENST00000523014 93 ntBASIC2.78□□□□□ -1.96
CCDC113Q9H0I3 AC024405.2-202ENST00000532731 184 ntBASIC2.78□□□□□ -1.96
CCDC113Q9H0I3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC113Q9H0I3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC113Q9H0I3 FO624990.1-201ENST00000636373 85 ntBASIC2.78□□□□□ -1.96
CCDC113Q9H0I3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC113Q9H0I3 RNU4-82P-201ENST00000362443 140 ntBASIC2.77□□□□□ -1.97
CCDC113Q9H0I3 Y_RNA.274-201ENST00000364714 101 ntBASIC2.77□□□□□ -1.97
CCDC113Q9H0I3 Y_RNA.304-201ENST00000365011 112 ntBASIC2.77□□□□□ -1.97
CCDC113Q9H0I3 Y_RNA.308-201ENST00000365043 101 ntBASIC2.77□□□□□ -1.97
CCDC113Q9H0I3 RNU6-144P-201ENST00000383951 107 ntBASIC2.77□□□□□ -1.97
CCDC113Q9H0I3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CCDC113Q9H0I3 AL355497.1-201ENST00000406262 551 ntBASIC2.77□□□□□ -1.97
CCDC113Q9H0I3 Y_RNA.793-201ENST00000411222 111 ntBASIC2.77□□□□□ -1.97
CCDC113Q9H0I3 Z98949.2-201ENST00000440996 144 ntBASIC2.77□□□□□ -1.97
CCDC113Q9H0I3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC113Q9H0I3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC113Q9H0I3 Y_RNA.700-201ENST00000516806 100 ntBASIC2.77□□□□□ -1.97
CCDC113Q9H0I3 RNU6-182P-201ENST00000516970 105 ntBASIC2.77□□□□□ -1.97
CCDC113Q9H0I3 MIR4513-201ENST00000581077 86 ntBASIC2.77□□□□□ -1.97
CCDC113Q9H0I3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.77□□□□□ -1.97
CCDC113Q9H0I3 AP003357.1-201ENST00000604497 148 ntBASIC2.77□□□□□ -1.97
CCDC113Q9H0I3 AL049779.4-201ENST00000604500 156 ntBASIC2.77□□□□□ -1.97
CCDC113Q9H0I3 AC010297.1-201ENST00000623948 149 ntBASIC2.77□□□□□ -1.97
CCDC113Q9H0I3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CCDC113Q9H0I3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC113Q9H0I3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC113Q9H0I3 MIR411-201ENST00000362239 96 ntBASIC2.76□□□□□ -1.97
CCDC113Q9H0I3 Y_RNA.29-201ENST00000362570 113 ntBASIC2.76□□□□□ -1.97
CCDC113Q9H0I3 SNORA3A-201ENST00000364113 130 ntBASIC2.76□□□□□ -1.97
CCDC113Q9H0I3 MIR520G-201ENST00000385064 90 ntBASIC2.76□□□□□ -1.97
CCDC113Q9H0I3 SNORA36B-201ENST00000410438 131 ntBASIC2.76□□□□□ -1.97
CCDC113Q9H0I3 Y_RNA.621-201ENST00000411065 96 ntBASIC2.76□□□□□ -1.97
CCDC113Q9H0I3 AL513328.1-201ENST00000446460 224 ntBASIC2.76□□□□□ -1.97
CCDC113Q9H0I3 MIR4446-201ENST00000578505 67 ntBASIC2.76□□□□□ -1.97
CCDC113Q9H0I3 Z83818.1-201ENST00000603584 150 ntBASIC2.76□□□□□ -1.97
CCDC113Q9H0I3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC113Q9H0I3 SNORA8.3-201ENST00000384679 139 ntBASIC2.75□□□□□ -1.97
CCDC113Q9H0I3 MIR524-201ENST00000385242 87 ntBASIC2.75□□□□□ -1.97
CCDC113Q9H0I3 AC099677.2-201ENST00000436385 175 ntBASIC2.75□□□□□ -1.97
CCDC113Q9H0I3 AC233266.1-201ENST00000454518 96 ntBASIC2.75□□□□□ -1.97
CCDC113Q9H0I3 Y_RNA.644-201ENST00000459006 113 ntBASIC2.75□□□□□ -1.97
CCDC113Q9H0I3 RNU7-94P-201ENST00000459576 63 ntBASIC2.75□□□□□ -1.97
CCDC113Q9H0I3 AL163195.1-201ENST00000496941 348 ntBASIC2.75□□□□□ -1.97
CCDC113Q9H0I3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC113Q9H0I3 Y_RNA.674-201ENST00000516362 113 ntBASIC2.75□□□□□ -1.97
CCDC113Q9H0I3 SNORA81.3-201ENST00000517283 198 ntBASIC2.75□□□□□ -1.97
CCDC113Q9H0I3 AC011921.3-201ENST00000605540 361 ntBASIC2.75□□□□□ -1.97
CCDC113Q9H0I3 AC242852.1-201ENST00000612151 96 ntBASIC2.75□□□□□ -1.97
CCDC113Q9H0I3 Y_RNA.802-201ENST00000614892 130 ntBASIC2.75□□□□□ -1.97
CCDC113Q9H0I3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.75□□□□□ -1.97
CCDC113Q9H0I3 U4.3-201ENST00000621047 82 ntBASIC2.75□□□□□ -1.97
CCDC113Q9H0I3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC113Q9H0I3 AC244015.1-201ENST00000622301 99 ntBASIC2.75□□□□□ -1.97
CCDC113Q9H0I3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC113Q9H0I3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC113Q9H0I3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC113Q9H0I3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CCDC113Q9H0I3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC113Q9H0I3 RNU6-923P-201ENST00000364753 107 ntBASIC2.74□□□□□ -1.97
CCDC113Q9H0I3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CCDC113Q9H0I3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC113Q9H0I3 RNY3P16-201ENST00000516338 101 ntBASIC2.74□□□□□ -1.97
CCDC113Q9H0I3 RNU6-1096P-201ENST00000517089 102 ntBASIC2.74□□□□□ -1.97
CCDC113Q9H0I3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC113Q9H0I3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC113Q9H0I3 MIR4529-201ENST00000578110 78 ntBASIC2.74□□□□□ -1.97
CCDC113Q9H0I3 MIR5094-201ENST00000578766 85 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 194.4 ms