Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
AMBRA1Q9C0C7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
AMBRA1Q9C0C7 Y_RNA.99-201ENST00000363138 105 ntBASIC2.35□□□□□ -2.03
AMBRA1Q9C0C7 Y_RNA.293-201ENST00000364908 93 ntBASIC2.35□□□□□ -2.03
AMBRA1Q9C0C7 RNU6-144P-201ENST00000383951 107 ntBASIC2.35□□□□□ -2.03
AMBRA1Q9C0C7 MIR518C-201ENST00000384822 101 ntBASIC2.35□□□□□ -2.03
AMBRA1Q9C0C7 EDDM3CP-201ENST00000415977 425 ntBASIC2.35□□□□□ -2.03
AMBRA1Q9C0C7 AC104332.1-201ENST00000440471 797 ntBASIC2.35□□□□□ -2.03
AMBRA1Q9C0C7 RPL36AP21-201ENST00000490372 323 ntBASIC2.35□□□□□ -2.03
AMBRA1Q9C0C7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.35□□□□□ -2.03
AMBRA1Q9C0C7 AC005972.2-201ENST00000604690 348 ntBASIC2.35□□□□□ -2.03
AMBRA1Q9C0C7 AC068700.1-201ENST00000565862 3754 ntBASIC2.35□□□□□ -2.03
AMBRA1Q9C0C7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
AMBRA1Q9C0C7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
AMBRA1Q9C0C7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
AMBRA1Q9C0C7 RNU6-1205P-201ENST00000363625 106 ntBASIC2.34□□□□□ -2.03
AMBRA1Q9C0C7 RNU6-1323P-201ENST00000384025 107 ntBASIC2.34□□□□□ -2.03
AMBRA1Q9C0C7 Y_RNA.435-201ENST00000384095 112 ntBASIC2.34□□□□□ -2.03
AMBRA1Q9C0C7 SNORD116-13-201ENST00000384408 92 ntBASIC2.34□□□□□ -2.03
AMBRA1Q9C0C7 AC108938.1-201ENST00000451204 136 ntBASIC2.34□□□□□ -2.03
AMBRA1Q9C0C7 AC010409.1-201ENST00000487382 476 ntBASIC2.34□□□□□ -2.03
AMBRA1Q9C0C7 AC117454.1-201ENST00000491120 168 ntBASIC2.34□□□□□ -2.03
AMBRA1Q9C0C7 RNU6-1146P-201ENST00000516282 102 ntBASIC2.34□□□□□ -2.03
AMBRA1Q9C0C7 RNU7-115P-201ENST00000516433 55 ntBASIC2.34□□□□□ -2.03
AMBRA1Q9C0C7 SNORA31.11-201ENST00000516528 139 ntBASIC2.34□□□□□ -2.03
AMBRA1Q9C0C7 RNU6-63P-201ENST00000516690 95 ntBASIC2.34□□□□□ -2.03
AMBRA1Q9C0C7 SUMO2P18-201ENST00000518873 252 ntBASIC2.34□□□□□ -2.03
AMBRA1Q9C0C7 AC021269.2-201ENST00000532318 330 ntBASIC2.34□□□□□ -2.03
AMBRA1Q9C0C7 AL137100.2-201ENST00000555786 315 ntBASIC2.34□□□□□ -2.03
AMBRA1Q9C0C7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
AMBRA1Q9C0C7 Z82195.2-201ENST00000612348 18351 ntBASIC2.33□□□□□ -2.04
AMBRA1Q9C0C7 SNORD114-6-201ENST00000364393 72 ntBASIC2.33□□□□□ -2.04
AMBRA1Q9C0C7 SNORA8.3-201ENST00000384679 139 ntBASIC2.33□□□□□ -2.04
AMBRA1Q9C0C7 RNU6-1072P-201ENST00000384703 107 ntBASIC2.33□□□□□ -2.04
AMBRA1Q9C0C7 RNU6-443P-201ENST00000384780 107 ntBASIC2.33□□□□□ -2.04
AMBRA1Q9C0C7 MIR626-201ENST00000385032 94 ntBASIC2.33□□□□□ -2.04
AMBRA1Q9C0C7 PCNPP3-201ENST00000393579 471 ntBASIC2.33□□□□□ -2.04
AMBRA1Q9C0C7 RNA5SP511-201ENST00000410487 115 ntBASIC2.33□□□□□ -2.04
AMBRA1Q9C0C7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.33□□□□□ -2.04
AMBRA1Q9C0C7 AC011406.1-201ENST00000512440 370 ntBASIC2.33□□□□□ -2.04
AMBRA1Q9C0C7 Y_RNA.662-201ENST00000516028 97 ntBASIC2.33□□□□□ -2.04
AMBRA1Q9C0C7 Y_RNA.676-201ENST00000516393 96 ntBASIC2.33□□□□□ -2.04
AMBRA1Q9C0C7 CYCSP26-201ENST00000534107 320 ntBASIC2.33□□□□□ -2.04
AMBRA1Q9C0C7 SNORD53-201ENST00000579969 78 ntBASIC2.33□□□□□ -2.04
AMBRA1Q9C0C7 MIR5688-201ENST00000580619 83 ntBASIC2.33□□□□□ -2.04
AMBRA1Q9C0C7 MIR4438-201ENST00000585271 93 ntBASIC2.33□□□□□ -2.04
AMBRA1Q9C0C7 POLR3GP1-201ENST00000594073 261 ntBASIC2.33□□□□□ -2.04
AMBRA1Q9C0C7 AC004832.4-201ENST00000608952 331 ntBASIC2.33□□□□□ -2.04
AMBRA1Q9C0C7 Y_RNA.802-201ENST00000614892 130 ntBASIC2.33□□□□□ -2.04
AMBRA1Q9C0C7 U6.106-201ENST00000636360 105 ntBASIC2.33□□□□□ -2.04
AMBRA1Q9C0C7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.33□□□□□ -2.04
AMBRA1Q9C0C7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
AMBRA1Q9C0C7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
AMBRA1Q9C0C7 Y_RNA.7-201ENST00000362352 102 ntBASIC2.32□□□□□ -2.04
AMBRA1Q9C0C7 Y_RNA.238-201ENST00000364441 102 ntBASIC2.32□□□□□ -2.04
AMBRA1Q9C0C7 RNU6-117P-201ENST00000365415 107 ntBASIC2.32□□□□□ -2.04
AMBRA1Q9C0C7 Y_RNA.464-201ENST00000384282 110 ntBASIC2.32□□□□□ -2.04
AMBRA1Q9C0C7 RNU6-136P-201ENST00000384663 107 ntBASIC2.32□□□□□ -2.04
AMBRA1Q9C0C7 Y_RNA.571-201ENST00000384753 98 ntBASIC2.32□□□□□ -2.04
AMBRA1Q9C0C7 MIR1262-201ENST00000408276 93 ntBASIC2.32□□□□□ -2.04
AMBRA1Q9C0C7 SNORA36B-201ENST00000410438 131 ntBASIC2.32□□□□□ -2.04
AMBRA1Q9C0C7 RNU2-52P-201ENST00000410680 190 ntBASIC2.32□□□□□ -2.04
AMBRA1Q9C0C7 RN7SKP51-201ENST00000410781 304 ntBASIC2.32□□□□□ -2.04
AMBRA1Q9C0C7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.32□□□□□ -2.04
AMBRA1Q9C0C7 AC096725.1-201ENST00000514266 313 ntBASIC2.32□□□□□ -2.04
AMBRA1Q9C0C7 RNU7-116P-201ENST00000516940 62 ntBASIC2.32□□□□□ -2.04
AMBRA1Q9C0C7 RNU7-172P-201ENST00000517125 64 ntBASIC2.32□□□□□ -2.04
AMBRA1Q9C0C7 AC100767.1-201ENST00000528178 123 ntBASIC2.32□□□□□ -2.04
AMBRA1Q9C0C7 DEFB122-202ENST00000569013 197 ntBASIC2.32□□□□□ -2.04
AMBRA1Q9C0C7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.32□□□□□ -2.04
AMBRA1Q9C0C7 AL365434.2-201ENST00000607979 234 ntBASIC2.32□□□□□ -2.04
AMBRA1Q9C0C7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.32□□□□□ -2.04
AMBRA1Q9C0C7 U6.73-201ENST00000619194 103 ntBASIC2.32□□□□□ -2.04
AMBRA1Q9C0C7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
AMBRA1Q9C0C7 RNU1-22P-201ENST00000363334 158 ntBASIC2.31□□□□□ -2.04
AMBRA1Q9C0C7 RNA5SP456-201ENST00000364002 114 ntBASIC2.31□□□□□ -2.04
AMBRA1Q9C0C7 RNU4-10P-201ENST00000364383 140 ntBASIC2.31□□□□□ -2.04
AMBRA1Q9C0C7 Y_RNA.240-201ENST00000364469 95 ntBASIC2.31□□□□□ -2.04
AMBRA1Q9C0C7 RNU4-17P-201ENST00000365598 141 ntBASIC2.31□□□□□ -2.04
AMBRA1Q9C0C7 RNU6-160P-201ENST00000384591 107 ntBASIC2.31□□□□□ -2.04
AMBRA1Q9C0C7 RNU6-417P-201ENST00000384712 107 ntBASIC2.31□□□□□ -2.04
AMBRA1Q9C0C7 AL135786.1-201ENST00000415892 214 ntBASIC2.31□□□□□ -2.04
AMBRA1Q9C0C7 AL162725.1-201ENST00000435405 301 ntBASIC2.31□□□□□ -2.04
AMBRA1Q9C0C7 HMGN2P34-201ENST00000437647 269 ntBASIC2.31□□□□□ -2.04
AMBRA1Q9C0C7 AC245102.2-201ENST00000448956 180 ntBASIC2.31□□□□□ -2.04
AMBRA1Q9C0C7 RNU1-131P-201ENST00000458943 161 ntBASIC2.31□□□□□ -2.04
AMBRA1Q9C0C7 RNU7-26P-201ENST00000458980 63 ntBASIC2.31□□□□□ -2.04
AMBRA1Q9C0C7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.31□□□□□ -2.04
AMBRA1Q9C0C7 RNU6-1041P-201ENST00000516254 102 ntBASIC2.31□□□□□ -2.04
AMBRA1Q9C0C7 MRPS18CP4-201ENST00000535821 231 ntBASIC2.31□□□□□ -2.04
AMBRA1Q9C0C7 AC026271.5-201ENST00000577873 130 ntBASIC2.31□□□□□ -2.04
AMBRA1Q9C0C7 AP003357.1-201ENST00000604497 148 ntBASIC2.31□□□□□ -2.04
AMBRA1Q9C0C7 MIR548AY-201ENST00000617669 107 ntBASIC2.31□□□□□ -2.04
AMBRA1Q9C0C7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
AMBRA1Q9C0C7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
AMBRA1Q9C0C7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 MIR21-201ENST00000362134 72 ntBASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 Y_RNA.24-201ENST00000362508 103 ntBASIC2.3□□□□□ -2.04
AMBRA1Q9C0C7 snoU2-30.2-201ENST00000362805 70 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms