Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC106754.1-201ENST00000562632 1513 ntBASIC-0.05□□□□□ -2.42
UPF3BQ9BZI7 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.06□□□□□ -2.42
UPF3BQ9BZI7 SNORA20B-201ENST00000384220 132 ntBASIC-0.06□□□□□ -2.42
UPF3BQ9BZI7 RNU5A-2P-201ENST00000384337 116 ntBASIC-0.06□□□□□ -2.42
UPF3BQ9BZI7 MIR136-201ENST00000385207 82 ntBASIC-0.06□□□□□ -2.42
UPF3BQ9BZI7 RNU6-700P-201ENST00000391043 107 ntBASIC-0.06□□□□□ -2.42
UPF3BQ9BZI7 RNU6-159P-201ENST00000391080 106 ntBASIC-0.06□□□□□ -2.42
UPF3BQ9BZI7 MIR1302-7-201ENST00000408841 72 ntBASIC-0.06□□□□□ -2.42
UPF3BQ9BZI7 SNORA40.8-201ENST00000411034 126 ntBASIC-0.06□□□□□ -2.42
UPF3BQ9BZI7 BX295541.1-201ENST00000417774 250 ntBASIC-0.06□□□□□ -2.42
UPF3BQ9BZI7 PIGPP3-201ENST00000425307 415 ntBASIC-0.06□□□□□ -2.42
UPF3BQ9BZI7 MRPS36P3-201ENST00000519284 130 ntBASIC-0.06□□□□□ -2.42
UPF3BQ9BZI7 MTND2P38-201ENST00000522536 667 ntBASIC-0.06□□□□□ -2.42
UPF3BQ9BZI7 RPL23AP91-201ENST00000569211 455 ntBASIC-0.06□□□□□ -2.42
UPF3BQ9BZI7 U8.5-201ENST00000364528 136 ntBASIC-0.07□□□□□ -2.42
UPF3BQ9BZI7 RNU6-46P-201ENST00000383860 107 ntBASIC-0.07□□□□□ -2.42
UPF3BQ9BZI7 RNU6-933P-201ENST00000384424 107 ntBASIC-0.07□□□□□ -2.42
UPF3BQ9BZI7 SNORA2B-201ENST00000384583 137 ntBASIC-0.07□□□□□ -2.42
UPF3BQ9BZI7 RNU6-376P-201ENST00000384731 106 ntBASIC-0.07□□□□□ -2.42
UPF3BQ9BZI7 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.07□□□□□ -2.42
UPF3BQ9BZI7 RNU6-248P-201ENST00000410720 107 ntBASIC-0.07□□□□□ -2.42
UPF3BQ9BZI7 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.07□□□□□ -2.42
UPF3BQ9BZI7 MTATP6P18-201ENST00000417994 673 ntBASIC-0.07□□□□□ -2.42
UPF3BQ9BZI7 AC243428.1-201ENST00000421099 264 ntBASIC-0.07□□□□□ -2.42
UPF3BQ9BZI7 AC073415.1-201ENST00000449240 153 ntBASIC-0.07□□□□□ -2.42
UPF3BQ9BZI7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.07□□□□□ -2.42
UPF3BQ9BZI7 RNA5SP20-201ENST00000515976 84 ntBASIC-0.07□□□□□ -2.42
UPF3BQ9BZI7 SNORA25.12-201ENST00000516202 82 ntBASIC-0.07□□□□□ -2.42
UPF3BQ9BZI7 AC069113.3-201ENST00000521019 150 ntBASIC-0.07□□□□□ -2.42
UPF3BQ9BZI7 MIR3612-201ENST00000579753 87 ntBASIC-0.07□□□□□ -2.42
UPF3BQ9BZI7 AC090616.2-202ENST00000584248 222 ntBASIC-0.07□□□□□ -2.42
UPF3BQ9BZI7 MIR4762-201ENST00000585261 75 ntBASIC-0.07□□□□□ -2.42
UPF3BQ9BZI7 SNORD50.1-201ENST00000362987 71 ntBASIC-0.08□□□□□ -2.42
UPF3BQ9BZI7 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.08□□□□□ -2.42
UPF3BQ9BZI7 RNU6-996P-201ENST00000365438 107 ntBASIC-0.08□□□□□ -2.42
UPF3BQ9BZI7 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.08□□□□□ -2.42
UPF3BQ9BZI7 RNU6-214P-201ENST00000384130 107 ntBASIC-0.08□□□□□ -2.42
UPF3BQ9BZI7 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.08□□□□□ -2.42
UPF3BQ9BZI7 SNORD71-201ENST00000411292 86 ntBASIC-0.08□□□□□ -2.42
UPF3BQ9BZI7 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.08□□□□□ -2.42
UPF3BQ9BZI7 AC079354.2-201ENST00000453523 154 ntBASIC-0.08□□□□□ -2.42
UPF3BQ9BZI7 RPS3AP17-201ENST00000472594 777 ntBASIC-0.08□□□□□ -2.42
UPF3BQ9BZI7 AC114811.1-201ENST00000507207 168 ntBASIC-0.08□□□□□ -2.42
UPF3BQ9BZI7 AC091144.1-201ENST00000519573 138 ntBASIC-0.08□□□□□ -2.42
UPF3BQ9BZI7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.08□□□□□ -2.42
UPF3BQ9BZI7 AC141557.1-201ENST00000540982 400 ntBASIC-0.08□□□□□ -2.42
UPF3BQ9BZI7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.08□□□□□ -2.42
UPF3BQ9BZI7 MIR4645-201ENST00000583158 77 ntBASIC-0.08□□□□□ -2.42
UPF3BQ9BZI7 AL133215.3-201ENST00000609801 448 ntBASIC-0.08□□□□□ -2.42
UPF3BQ9BZI7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
UPF3BQ9BZI7 SNORA9.1-201ENST00000362412 131 ntBASIC-0.09□□□□□ -2.42
UPF3BQ9BZI7 SNORA27.1-201ENST00000362604 124 ntBASIC-0.09□□□□□ -2.42
UPF3BQ9BZI7 RNA5SP517-201ENST00000364724 117 ntBASIC-0.09□□□□□ -2.42
UPF3BQ9BZI7 RNU6-815P-201ENST00000384080 113 ntBASIC-0.09□□□□□ -2.42
UPF3BQ9BZI7 RNU6-297P-201ENST00000384636 107 ntBASIC-0.09□□□□□ -2.42
UPF3BQ9BZI7 RN7SKP142-201ENST00000411236 328 ntBASIC-0.09□□□□□ -2.42
UPF3BQ9BZI7 MTCYBP8-201ENST00000422855 651 ntBASIC-0.09□□□□□ -2.42
UPF3BQ9BZI7 AL137792.2-201ENST00000443484 235 ntBASIC-0.09□□□□□ -2.42
UPF3BQ9BZI7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.09□□□□□ -2.42
UPF3BQ9BZI7 RNA5SP227-201ENST00000516184 113 ntBASIC-0.09□□□□□ -2.42
UPF3BQ9BZI7 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.09□□□□□ -2.42
UPF3BQ9BZI7 AC093027.1-201ENST00000546698 429 ntBASIC-0.09□□□□□ -2.42
UPF3BQ9BZI7 RBM11P1-201ENST00000604951 799 ntBASIC-0.09□□□□□ -2.42
UPF3BQ9BZI7 AC008536.2-201ENST00000607284 349 ntBASIC-0.09□□□□□ -2.42
UPF3BQ9BZI7 AL355073.2-201ENST00000612106 557 ntBASIC-0.09□□□□□ -2.42
UPF3BQ9BZI7 uc_338.6-201ENST00000613544 171 ntBASIC-0.09□□□□□ -2.42
UPF3BQ9BZI7 AC006504.8-201ENST00000621046 635 ntBASIC-0.09□□□□□ -2.42
UPF3BQ9BZI7 SNORD114-5-201ENST00000362928 70 ntBASIC-0.1□□□□□ -2.43
UPF3BQ9BZI7 SNORD114-9-201ENST00000364370 72 ntBASIC-0.1□□□□□ -2.43
UPF3BQ9BZI7 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.1□□□□□ -2.43
UPF3BQ9BZI7 RNY3P9-201ENST00000384727 106 ntBASIC-0.1□□□□□ -2.43
UPF3BQ9BZI7 MIR520F-201ENST00000384824 87 ntBASIC-0.1□□□□□ -2.43
UPF3BQ9BZI7 MIR520H-201ENST00000385126 88 ntBASIC-0.1□□□□□ -2.43
UPF3BQ9BZI7 MIR516B2-201ENST00000385190 85 ntBASIC-0.1□□□□□ -2.43
UPF3BQ9BZI7 MIR214-201ENST00000385214 110 ntBASIC-0.1□□□□□ -2.43
UPF3BQ9BZI7 RNA5SP95-201ENST00000410319 137 ntBASIC-0.1□□□□□ -2.43
UPF3BQ9BZI7 SNORD83.1-201ENST00000411362 77 ntBASIC-0.1□□□□□ -2.43
UPF3BQ9BZI7 MTCO2P11-201ENST00000431069 680 ntBASIC-0.1□□□□□ -2.43
UPF3BQ9BZI7 TPTE2P5-203ENST00000458118 728 ntBASIC-0.1□□□□□ -2.43
UPF3BQ9BZI7 RNU7-63P-201ENST00000459054 62 ntBASIC-0.1□□□□□ -2.43
UPF3BQ9BZI7 snoU13.11-201ENST00000459219 104 ntBASIC-0.1□□□□□ -2.43
UPF3BQ9BZI7 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.1□□□□□ -2.43
UPF3BQ9BZI7 AC091885.1-201ENST00000506658 268 ntBASIC-0.1□□□□□ -2.43
UPF3BQ9BZI7 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.1□□□□□ -2.43
UPF3BQ9BZI7 MIR5692C1-201ENST00000585309 91 ntBASIC-0.1□□□□□ -2.43
UPF3BQ9BZI7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.1□□□□□ -2.43
UPF3BQ9BZI7 MIR409-201ENST00000362237 79 ntBASIC-0.11□□□□□ -2.43
UPF3BQ9BZI7 SNORD114-7-201ENST00000362520 77 ntBASIC-0.11□□□□□ -2.43
UPF3BQ9BZI7 RNU6-117P-201ENST00000365415 107 ntBASIC-0.11□□□□□ -2.43
UPF3BQ9BZI7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.11□□□□□ -2.43
UPF3BQ9BZI7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
UPF3BQ9BZI7 AL606923.1-201ENST00000406616 190 ntBASIC-0.11□□□□□ -2.43
UPF3BQ9BZI7 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.11□□□□□ -2.43
UPF3BQ9BZI7 AC018865.2-201ENST00000423631 129 ntBASIC-0.11□□□□□ -2.43
UPF3BQ9BZI7 AC073261.1-201ENST00000429409 121 ntBASIC-0.11□□□□□ -2.43
UPF3BQ9BZI7 Z82188.1-201ENST00000436709 154 ntBASIC-0.11□□□□□ -2.43
UPF3BQ9BZI7 MIR2115-201ENST00000516657 100 ntBASIC-0.11□□□□□ -2.43
UPF3BQ9BZI7 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.11□□□□□ -2.43
UPF3BQ9BZI7 MIR3678-201ENST00000578455 94 ntBASIC-0.11□□□□□ -2.43
UPF3BQ9BZI7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 152.7 ms