Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 RNU6-1013P-201ENST00000384180 107 ntBASIC0.69□□□□□ -2.3
PCDH11XQ9BZA7 MIR181A1-201ENST00000385026 110 ntBASIC0.69□□□□□ -2.3
PCDH11XQ9BZA7 MIR100-201ENST00000385259 80 ntBASIC0.69□□□□□ -2.3
PCDH11XQ9BZA7 AL355796.1-201ENST00000406706 323 ntBASIC0.69□□□□□ -2.3
PCDH11XQ9BZA7 CALM2P4-201ENST00000430810 426 ntBASIC0.69□□□□□ -2.3
PCDH11XQ9BZA7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.69□□□□□ -2.3
PCDH11XQ9BZA7 RNU6-864P-201ENST00000516256 108 ntBASIC0.69□□□□□ -2.3
PCDH11XQ9BZA7 RNU6-947P-201ENST00000516264 106 ntBASIC0.69□□□□□ -2.3
PCDH11XQ9BZA7 RNU11-2P-201ENST00000516898 142 ntBASIC0.69□□□□□ -2.3
PCDH11XQ9BZA7 MTND2P38-201ENST00000522536 667 ntBASIC0.69□□□□□ -2.3
PCDH11XQ9BZA7 AL358944.1-201ENST00000528537 144 ntBASIC0.69□□□□□ -2.3
PCDH11XQ9BZA7 AC024614.3-201ENST00000637860 256 ntBASIC0.69□□□□□ -2.3
PCDH11XQ9BZA7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
PCDH11XQ9BZA7 Y_RNA.402-201ENST00000383972 102 ntBASIC0.68□□□□□ -2.3
PCDH11XQ9BZA7 AC006461.1-201ENST00000412637 326 ntBASIC0.68□□□□□ -2.3
PCDH11XQ9BZA7 AC091021.1-201ENST00000468051 388 ntBASIC0.68□□□□□ -2.3
PCDH11XQ9BZA7 AC074133.1-201ENST00000515696 183 ntBASIC0.68□□□□□ -2.3
PCDH11XQ9BZA7 RNU7-12P-201ENST00000516030 62 ntBASIC0.68□□□□□ -2.3
PCDH11XQ9BZA7 RNU6-1278P-201ENST00000516130 107 ntBASIC0.68□□□□□ -2.3
PCDH11XQ9BZA7 ACA64.5-201ENST00000516207 127 ntBASIC0.68□□□□□ -2.3
PCDH11XQ9BZA7 AC093023.1-201ENST00000547375 507 ntBASIC0.68□□□□□ -2.3
PCDH11XQ9BZA7 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.68□□□□□ -2.3
PCDH11XQ9BZA7 MIR3942-201ENST00000585264 109 ntBASIC0.68□□□□□ -2.3
PCDH11XQ9BZA7 AC080078.2-201ENST00000603766 501 ntBASIC0.68□□□□□ -2.3
PCDH11XQ9BZA7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
PCDH11XQ9BZA7 MIR410-201ENST00000362222 80 ntBASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 SNORA27.1-201ENST00000362604 124 ntBASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 Y_RNA.124-201ENST00000363339 93 ntBASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 Y_RNA.363-201ENST00000365529 113 ntBASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 RNU6-35P-201ENST00000384530 107 ntBASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 RNU6-306P-201ENST00000384617 107 ntBASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 Y_RNA.559-201ENST00000384686 107 ntBASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 MIR92A1-201ENST00000385233 78 ntBASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 RNA5SP118-201ENST00000410385 109 ntBASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 AC009161.1-201ENST00000417306 376 ntBASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 AC114482.1-201ENST00000418010 247 ntBASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 SUMO1P2-201ENST00000452524 304 ntBASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 LINC01399-202ENST00000458450 244 ntBASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 SNORD5.1-201ENST00000458800 75 ntBASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 PDCD5P2-201ENST00000507570 312 ntBASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 RNA5SP20-201ENST00000515976 84 ntBASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 RNU6-314P-201ENST00000516574 104 ntBASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 RNU1-54P-201ENST00000517181 120 ntBASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 AP003484.1-201ENST00000530974 250 ntBASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 AC004817.2-201ENST00000561794 651 ntBASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 AC068790.6-201ENST00000602558 258 ntBASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 MIR5087-201ENST00000635826 76 ntBASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.67□□□□□ -2.3
PCDH11XQ9BZA7 SNORA1B-201ENST00000362535 133 ntBASIC0.66□□□□□ -2.3
PCDH11XQ9BZA7 Y_RNA.194-201ENST00000363985 102 ntBASIC0.66□□□□□ -2.3
PCDH11XQ9BZA7 Y_RNA.267-201ENST00000364679 109 ntBASIC0.66□□□□□ -2.3
PCDH11XQ9BZA7 RNU6-1145P-201ENST00000384246 107 ntBASIC0.66□□□□□ -2.3
PCDH11XQ9BZA7 SNORD116-2-201ENST00000384274 95 ntBASIC0.66□□□□□ -2.3
PCDH11XQ9BZA7 SNORD116-6-201ENST00000384711 96 ntBASIC0.66□□□□□ -2.3
PCDH11XQ9BZA7 RNU6-376P-201ENST00000384731 106 ntBASIC0.66□□□□□ -2.3
PCDH11XQ9BZA7 MIR329-1-201ENST00000385028 80 ntBASIC0.66□□□□□ -2.3
PCDH11XQ9BZA7 AC018865.2-201ENST00000423631 129 ntBASIC0.66□□□□□ -2.3
PCDH11XQ9BZA7 EIF1P2-201ENST00000428233 350 ntBASIC0.66□□□□□ -2.3
PCDH11XQ9BZA7 UQCRBP2-201ENST00000447827 297 ntBASIC0.66□□□□□ -2.3
PCDH11XQ9BZA7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.66□□□□□ -2.3
PCDH11XQ9BZA7 SNORD124-201ENST00000459577 104 ntBASIC0.66□□□□□ -2.3
PCDH11XQ9BZA7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.66□□□□□ -2.3
PCDH11XQ9BZA7 AP002001.1-203ENST00000534002 267 ntBASIC0.66□□□□□ -2.3
PCDH11XQ9BZA7 PRELID3BP2-201ENST00000605362 201 ntBASIC0.66□□□□□ -2.3
PCDH11XQ9BZA7 AC004832.4-201ENST00000608952 331 ntBASIC0.66□□□□□ -2.3
PCDH11XQ9BZA7 AC073544.1-201ENST00000600110 1595 ntBASIC0.66□□□□□ -2.3
PCDH11XQ9BZA7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.66□□□□□ -2.3
PCDH11XQ9BZA7 MIRLET7C-201ENST00000362160 84 ntBASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 Y_RNA.9-201ENST00000362354 101 ntBASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 SNORD114-7-201ENST00000362520 77 ntBASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 Y_RNA.106-201ENST00000363189 100 ntBASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 RNY4P14-201ENST00000363656 96 ntBASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 MIR520G-201ENST00000385064 90 ntBASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 RNU5A-5P-201ENST00000411054 116 ntBASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 ELOCP21-201ENST00000412558 336 ntBASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 AL137792.2-201ENST00000443484 235 ntBASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 UBE2V1P7-201ENST00000446395 340 ntBASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 MTND1P17-201ENST00000448961 204 ntBASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 RPS26P48-201ENST00000491713 339 ntBASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 AC018710.1-201ENST00000506509 158 ntBASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 PSMC1P5-201ENST00000512850 177 ntBASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 RNU6-566P-201ENST00000516790 107 ntBASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 RNU6-1314P-201ENST00000517139 104 ntBASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 AC245505.1-201ENST00000556398 224 ntBASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 AC243829.6-201ENST00000612652 106 ntBASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 AC090617.10-201ENST00000624308 134 ntBASIC0.65□□□□□ -2.3
PCDH11XQ9BZA7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
PCDH11XQ9BZA7 AC005592.1-201ENST00000566527 1640 ntBASIC0.65□□□□□ -2.31
PCDH11XQ9BZA7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.65□□□□□ -2.31
PCDH11XQ9BZA7 MTND5P16-201ENST00000460269 1703 ntBASIC0.65□□□□□ -2.31
PCDH11XQ9BZA7 RNU6-833P-201ENST00000363486 107 ntBASIC0.64□□□□□ -2.31
PCDH11XQ9BZA7 Y_RNA.157-201ENST00000363638 102 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms