Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 MIR520G-201ENST00000385064 90 ntBASIC0.26□□□□□ -2.37
CDCA4Q9BXL8 RNU6-1001P-201ENST00000411265 100 ntBASIC0.26□□□□□ -2.37
CDCA4Q9BXL8 MTCO2P12-201ENST00000427426 682 ntBASIC0.26□□□□□ -2.37
CDCA4Q9BXL8 MTND3P23-201ENST00000431980 347 ntBASIC0.26□□□□□ -2.37
CDCA4Q9BXL8 ERLEC1P1-201ENST00000433806 578 ntBASIC0.26□□□□□ -2.37
CDCA4Q9BXL8 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.26□□□□□ -2.37
CDCA4Q9BXL8 MTATP6P13-201ENST00000438531 667 ntBASIC0.26□□□□□ -2.37
CDCA4Q9BXL8 RNU6-1114P-201ENST00000516022 107 ntBASIC0.26□□□□□ -2.37
CDCA4Q9BXL8 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
CDCA4Q9BXL8 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.26□□□□□ -2.37
CDCA4Q9BXL8 AL136317.1-201ENST00000612653 226 ntBASIC0.26□□□□□ -2.37
CDCA4Q9BXL8 AC027279.3-201ENST00000625055 122 ntBASIC0.26□□□□□ -2.37
CDCA4Q9BXL8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.26□□□□□ -2.37
CDCA4Q9BXL8 MTND5P16-201ENST00000460269 1703 ntBASIC0.26□□□□□ -2.37
CDCA4Q9BXL8 AC073544.1-201ENST00000600110 1595 ntBASIC0.25□□□□□ -2.37
CDCA4Q9BXL8 AC090625.1-201ENST00000357130 210 ntBASIC0.25□□□□□ -2.37
CDCA4Q9BXL8 MIR516B2-201ENST00000385190 85 ntBASIC0.25□□□□□ -2.37
CDCA4Q9BXL8 Y_RNA.582-201ENST00000391023 95 ntBASIC0.25□□□□□ -2.37
CDCA4Q9BXL8 RNU2-70P-201ENST00000410718 179 ntBASIC0.25□□□□□ -2.37
CDCA4Q9BXL8 RNU6-1068P-201ENST00000410958 103 ntBASIC0.25□□□□□ -2.37
CDCA4Q9BXL8 MRPS18CP6-201ENST00000423587 223 ntBASIC0.25□□□□□ -2.37
CDCA4Q9BXL8 AC114811.1-201ENST00000507207 168 ntBASIC0.25□□□□□ -2.37
CDCA4Q9BXL8 AC036111.3-201ENST00000526389 112 ntBASIC0.25□□□□□ -2.37
CDCA4Q9BXL8 AL358944.1-201ENST00000528537 144 ntBASIC0.25□□□□□ -2.37
CDCA4Q9BXL8 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.25□□□□□ -2.37
CDCA4Q9BXL8 AC093023.1-201ENST00000547375 507 ntBASIC0.25□□□□□ -2.37
CDCA4Q9BXL8 ZNF519P2-201ENST00000557032 169 ntBASIC0.25□□□□□ -2.37
CDCA4Q9BXL8 MIR5696-201ENST00000578474 85 ntBASIC0.25□□□□□ -2.37
CDCA4Q9BXL8 AC068137.3-201ENST00000639191 341 ntBASIC0.25□□□□□ -2.37
CDCA4Q9BXL8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
CDCA4Q9BXL8 SNORD68-201ENST00000363214 84 ntBASIC0.24□□□□□ -2.37
CDCA4Q9BXL8 SNORD14.1-201ENST00000365609 90 ntBASIC0.24□□□□□ -2.37
CDCA4Q9BXL8 Y_RNA.533-201ENST00000384596 114 ntBASIC0.24□□□□□ -2.37
CDCA4Q9BXL8 MIR520C-201ENST00000385005 87 ntBASIC0.24□□□□□ -2.37
CDCA4Q9BXL8 MIR1298-201ENST00000408783 112 ntBASIC0.24□□□□□ -2.37
CDCA4Q9BXL8 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.24□□□□□ -2.37
CDCA4Q9BXL8 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.24□□□□□ -2.37
CDCA4Q9BXL8 USP9YP16-201ENST00000430287 407 ntBASIC0.24□□□□□ -2.37
CDCA4Q9BXL8 AC005534.2-201ENST00000431047 433 ntBASIC0.24□□□□□ -2.37
CDCA4Q9BXL8 UQCRBP2-201ENST00000447827 297 ntBASIC0.24□□□□□ -2.37
CDCA4Q9BXL8 USP9YP23-201ENST00000455085 407 ntBASIC0.24□□□□□ -2.37
CDCA4Q9BXL8 RNU7-66P-201ENST00000459469 62 ntBASIC0.24□□□□□ -2.37
CDCA4Q9BXL8 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
CDCA4Q9BXL8 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.24□□□□□ -2.37
CDCA4Q9BXL8 SNORA74.3-201ENST00000517108 154 ntBASIC0.24□□□□□ -2.37
CDCA4Q9BXL8 AF235103.2-201ENST00000525753 346 ntBASIC0.24□□□□□ -2.37
CDCA4Q9BXL8 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.24□□□□□ -2.37
CDCA4Q9BXL8 MIR3684-201ENST00000579779 74 ntBASIC0.24□□□□□ -2.37
CDCA4Q9BXL8 AC125232.2-201ENST00000592457 143 ntBASIC0.24□□□□□ -2.37
CDCA4Q9BXL8 AL138726.1-201ENST00000614873 333 ntBASIC0.24□□□□□ -2.37
CDCA4Q9BXL8 AL357075.2-201ENST00000614906 189 ntBASIC0.24□□□□□ -2.37
CDCA4Q9BXL8 Y_RNA.135-201ENST00000363439 95 ntBASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 RNU6-654P-201ENST00000364373 107 ntBASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 Y_RNA.359-201ENST00000365498 102 ntBASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 Y_RNA.405-201ENST00000383979 100 ntBASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 Y_RNA.451-201ENST00000384200 100 ntBASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 RNU6-281P-201ENST00000384212 103 ntBASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 Y_RNA.524-201ENST00000384564 100 ntBASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 RNU6-306P-201ENST00000384617 107 ntBASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 Y_RNA.561-201ENST00000384694 100 ntBASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 MIR140-201ENST00000385282 100 ntBASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 SNORD105-201ENST00000386910 85 ntBASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 MIR873-201ENST00000401120 77 ntBASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 MTCYBP4-201ENST00000401524 249 ntBASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 MIR1827-201ENST00000408549 66 ntBASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 ELOCP21-201ENST00000412558 336 ntBASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 RNU7-175P-201ENST00000515915 61 ntBASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 RNU6-63P-201ENST00000516690 95 ntBASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 MIR4760-201ENST00000585040 80 ntBASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 AC124303.1-201ENST00000605703 360 ntBASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 AC091925.1-201ENST00000623204 462 ntBASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 AC127459.3-201ENST00000624328 466 ntBASIC0.23□□□□□ -2.37
CDCA4Q9BXL8 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
CDCA4Q9BXL8 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
CDCA4Q9BXL8 MIRLET7D-201ENST00000362263 87 ntBASIC0.22□□□□□ -2.37
CDCA4Q9BXL8 Y_RNA.481-201ENST00000384373 102 ntBASIC0.22□□□□□ -2.37
CDCA4Q9BXL8 RNU6-136P-201ENST00000384663 107 ntBASIC0.22□□□□□ -2.37
CDCA4Q9BXL8 Y_RNA.615-201ENST00000410769 117 ntBASIC0.22□□□□□ -2.37
CDCA4Q9BXL8 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.22□□□□□ -2.37
CDCA4Q9BXL8 AL358176.2-201ENST00000425769 204 ntBASIC0.22□□□□□ -2.37
CDCA4Q9BXL8 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.22□□□□□ -2.37
CDCA4Q9BXL8 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.22□□□□□ -2.37
CDCA4Q9BXL8 AL158211.1-201ENST00000566763 763 ntBASIC0.22□□□□□ -2.37
CDCA4Q9BXL8 MIR4764-201ENST00000580680 88 ntBASIC0.22□□□□□ -2.37
CDCA4Q9BXL8 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
CDCA4Q9BXL8 AC010525.2-201ENST00000590920 195 ntBASIC0.22□□□□□ -2.37
CDCA4Q9BXL8 AC019193.3-201ENST00000609144 554 ntBASIC0.22□□□□□ -2.37
CDCA4Q9BXL8 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.22□□□□□ -2.37
CDCA4Q9BXL8 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.22□□□□□ -2.37
CDCA4Q9BXL8 AL591926.4-201ENST00000616895 298 ntBASIC0.22□□□□□ -2.37
CDCA4Q9BXL8 AC023510.2-201ENST00000622162 746 ntBASIC0.22□□□□□ -2.37
CDCA4Q9BXL8 U6.115-201ENST00000636045 103 ntBASIC0.22□□□□□ -2.37
CDCA4Q9BXL8 MIR924-201ENST00000638017 53 ntBASIC0.22□□□□□ -2.37
CDCA4Q9BXL8 RNU6-1085P-201ENST00000363576 107 ntBASIC0.21□□□□□ -2.38
CDCA4Q9BXL8 U8.5-201ENST00000364528 136 ntBASIC0.21□□□□□ -2.38
CDCA4Q9BXL8 Y_RNA.373-201ENST00000365600 103 ntBASIC0.21□□□□□ -2.38
CDCA4Q9BXL8 Y_RNA.553-201ENST00000384670 102 ntBASIC0.21□□□□□ -2.38
CDCA4Q9BXL8 SNORD111-201ENST00000408139 94 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms