Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 SNORA3.2-201ENST00000408221 125 ntBASIC2.64□□□□□ -1.99
SALL3Q9BXA9 AC112771.1-201ENST00000463581 102 ntBASIC2.64□□□□□ -1.99
SALL3Q9BXA9 RNU6-919P-201ENST00000516731 104 ntBASIC2.64□□□□□ -1.99
SALL3Q9BXA9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.64□□□□□ -1.99
SALL3Q9BXA9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.64□□□□□ -1.99
SALL3Q9BXA9 AL356280.1-201ENST00000603614 379 ntBASIC2.64□□□□□ -1.99
SALL3Q9BXA9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SALL3Q9BXA9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
SALL3Q9BXA9 Y_RNA.218-201ENST00000364218 104 ntBASIC2.63□□□□□ -1.99
SALL3Q9BXA9 SNORD32B-201ENST00000364460 84 ntBASIC2.63□□□□□ -1.99
SALL3Q9BXA9 SNORD87-201ENST00000364849 89 ntBASIC2.63□□□□□ -1.99
SALL3Q9BXA9 Y_RNA.368-201ENST00000365547 113 ntBASIC2.63□□□□□ -1.99
SALL3Q9BXA9 MIR586-201ENST00000385035 97 ntBASIC2.63□□□□□ -1.99
SALL3Q9BXA9 RNU6-763P-201ENST00000390865 106 ntBASIC2.63□□□□□ -1.99
SALL3Q9BXA9 AL023284.1-201ENST00000403956 276 ntBASIC2.63□□□□□ -1.99
SALL3Q9BXA9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.63□□□□□ -1.99
SALL3Q9BXA9 RNU5E-9P-201ENST00000411164 104 ntBASIC2.63□□□□□ -1.99
SALL3Q9BXA9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.63□□□□□ -1.99
SALL3Q9BXA9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.63□□□□□ -1.99
SALL3Q9BXA9 RNU6-991P-201ENST00000516168 107 ntBASIC2.63□□□□□ -1.99
SALL3Q9BXA9 SNORA31.11-201ENST00000516528 139 ntBASIC2.63□□□□□ -1.99
SALL3Q9BXA9 MIR3616-201ENST00000584070 92 ntBASIC2.63□□□□□ -1.99
SALL3Q9BXA9 AC025754.2-201ENST00000606491 432 ntBASIC2.63□□□□□ -1.99
SALL3Q9BXA9 AC013791.1-201ENST00000616619 62 ntBASIC2.63□□□□□ -1.99
SALL3Q9BXA9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SALL3Q9BXA9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SALL3Q9BXA9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
SALL3Q9BXA9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SALL3Q9BXA9 RNU6-1325P-201ENST00000364905 105 ntBASIC2.62□□□□□ -1.99
SALL3Q9BXA9 U8.7-201ENST00000364940 136 ntBASIC2.62□□□□□ -1.99
SALL3Q9BXA9 RNU4-17P-201ENST00000365598 141 ntBASIC2.62□□□□□ -1.99
SALL3Q9BXA9 RNU6-1083P-201ENST00000384022 107 ntBASIC2.62□□□□□ -1.99
SALL3Q9BXA9 Y_RNA.456-201ENST00000384232 111 ntBASIC2.62□□□□□ -1.99
SALL3Q9BXA9 MIR29B2-201ENST00000385055 81 ntBASIC2.62□□□□□ -1.99
SALL3Q9BXA9 EIF4EP4-201ENST00000424916 578 ntBASIC2.62□□□□□ -1.99
SALL3Q9BXA9 AL591806.2-201ENST00000433122 173 ntBASIC2.62□□□□□ -1.99
SALL3Q9BXA9 RNA5SP458-201ENST00000516188 119 ntBASIC2.62□□□□□ -1.99
SALL3Q9BXA9 HSPE1P18-201ENST00000517602 280 ntBASIC2.62□□□□□ -1.99
SALL3Q9BXA9 AC100767.1-201ENST00000528178 123 ntBASIC2.62□□□□□ -1.99
SALL3Q9BXA9 AC010329.5-201ENST00000623497 2174 ntBASIC2.62□□□□□ -1.99
SALL3Q9BXA9 U6.115-201ENST00000636045 103 ntBASIC2.62□□□□□ -1.99
SALL3Q9BXA9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
SALL3Q9BXA9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.61□□□□□ -1.99
SALL3Q9BXA9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
SALL3Q9BXA9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
SALL3Q9BXA9 MTND5P32-201ENST00000560711 1802 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 RNU6-103P-201ENST00000363686 107 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 Y_RNA.287-201ENST00000364853 94 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 Y_RNA.357-201ENST00000365487 109 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 Y_RNA.568-201ENST00000384742 113 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 AL355497.1-201ENST00000406262 551 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 RNU2-2P-201ENST00000410396 191 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.61□□□□□ -1.99
SALL3Q9BXA9 U8.19-201ENST00000459095 133 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 RPS29P21-201ENST00000496272 170 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 RNU6-62P-201ENST00000516526 102 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.61□□□□□ -1.99
SALL3Q9BXA9 MIR4648-201ENST00000580107 72 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 U2.15-201ENST00000611544 191 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 U2.16-201ENST00000613119 191 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 U2.12-201ENST00000613778 191 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 U2.20-201ENST00000613956 192 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 U2.9-201ENST00000615427 191 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 U2.11-201ENST00000616345 191 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 U2.2-201ENST00000616535 191 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 U2.3-201ENST00000617785 191 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 U2.19-201ENST00000618602 191 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 RNU2-1-201ENST00000618664 191 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 U2.6-201ENST00000619225 191 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 U2.5-201ENST00000619465 191 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 U2.10-201ENST00000620268 191 ntBASIC2.61□□□□□ -1.99
SALL3Q9BXA9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.61□□□□□ -1.99
SALL3Q9BXA9 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SALL3Q9BXA9 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SALL3Q9BXA9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SALL3Q9BXA9 RNU6-899P-201ENST00000363947 107 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 RNU4-84P-201ENST00000364200 139 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 Y_RNA.273-201ENST00000364703 102 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 RNU6-449P-201ENST00000383914 107 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 SNORA72.4-201ENST00000384174 132 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 RNU6-429P-201ENST00000384582 108 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 MIR626-201ENST00000385032 94 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 MIR548B-201ENST00000385247 97 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 RNU6-257P-201ENST00000410238 98 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 RN7SKP223-201ENST00000410582 62 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 AC007064.1-201ENST00000412238 351 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 EBAG9P1-201ENST00000418955 543 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 MICF-203ENST00000432679 129 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 RPS20P10-201ENST00000451209 253 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 AC016925.1-201ENST00000458303 298 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 RNU7-26P-201ENST00000458980 63 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 SNORA70.12-201ENST00000516084 153 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 RN7SKP164-201ENST00000516138 266 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 RNU1-117P-201ENST00000517041 158 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 PRELID2P1-201ENST00000552837 301 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 MIR3613-201ENST00000579844 87 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 MIR5194-201ENST00000582634 120 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 AL159152.1-201ENST00000635019 2587 ntBASIC2.6□□□□□ -1.99
SALL3Q9BXA9 Z82195.2-201ENST00000612348 18351 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms