Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.67□□□□□ -2.52
VPS25Q9BRG1 MIR802-201ENST00000390235 94 ntBASIC-0.67□□□□□ -2.52
VPS25Q9BRG1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.67□□□□□ -2.52
VPS25Q9BRG1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.67□□□□□ -2.52
VPS25Q9BRG1 RNU7-138P-201ENST00000459479 64 ntBASIC-0.67□□□□□ -2.52
VPS25Q9BRG1 RNU6-329P-201ENST00000459618 107 ntBASIC-0.67□□□□□ -2.52
VPS25Q9BRG1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.67□□□□□ -2.52
VPS25Q9BRG1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.67□□□□□ -2.52
VPS25Q9BRG1 MIR4264-201ENST00000583520 66 ntBASIC-0.67□□□□□ -2.52
VPS25Q9BRG1 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.67□□□□□ -2.52
VPS25Q9BRG1 AC006380.1-201ENST00000603598 186 ntBASIC-0.67□□□□□ -2.52
VPS25Q9BRG1 Z84480.1-201ENST00000605131 311 ntBASIC-0.67□□□□□ -2.52
VPS25Q9BRG1 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.67□□□□□ -2.52
VPS25Q9BRG1 MIR548AZ-201ENST00000616567 95 ntBASIC-0.67□□□□□ -2.52
VPS25Q9BRG1 FTX_2.1-201ENST00000618816 94 ntBASIC-0.67□□□□□ -2.52
VPS25Q9BRG1 AL158209.2-201ENST00000619266 216 ntBASIC-0.67□□□□□ -2.52
VPS25Q9BRG1 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.68□□□□□ -2.52
VPS25Q9BRG1 SNORA72.1-201ENST00000363485 129 ntBASIC-0.68□□□□□ -2.52
VPS25Q9BRG1 SNORD115-8-201ENST00000363856 82 ntBASIC-0.68□□□□□ -2.52
VPS25Q9BRG1 SNORD115-38-201ENST00000365037 82 ntBASIC-0.68□□□□□ -2.52
VPS25Q9BRG1 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.68□□□□□ -2.52
VPS25Q9BRG1 SNORA51.10-201ENST00000384418 136 ntBASIC-0.68□□□□□ -2.52
VPS25Q9BRG1 MIR522-201ENST00000385071 87 ntBASIC-0.68□□□□□ -2.52
VPS25Q9BRG1 MIR196A2-201ENST00000385189 110 ntBASIC-0.68□□□□□ -2.52
VPS25Q9BRG1 RNA5SP300-201ENST00000391197 107 ntBASIC-0.68□□□□□ -2.52
VPS25Q9BRG1 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.68□□□□□ -2.52
VPS25Q9BRG1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.68□□□□□ -2.52
VPS25Q9BRG1 U8.21-201ENST00000459536 136 ntBASIC-0.68□□□□□ -2.52
VPS25Q9BRG1 HMGN1P10-201ENST00000474557 553 ntBASIC-0.68□□□□□ -2.52
VPS25Q9BRG1 Vault.3-201ENST00000516676 95 ntBASIC-0.68□□□□□ -2.52
VPS25Q9BRG1 IGLVI-20-201ENST00000519296 130 ntBASIC-0.68□□□□□ -2.52
VPS25Q9BRG1 MIR6740-201ENST00000618268 113 ntBASIC-0.68□□□□□ -2.52
VPS25Q9BRG1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.68□□□□□ -2.52
VPS25Q9BRG1 SNORD50B-201ENST00000364995 70 ntBASIC-0.69□□□□□ -2.52
VPS25Q9BRG1 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.69□□□□□ -2.52
VPS25Q9BRG1 MIR521-1-201ENST00000384902 87 ntBASIC-0.69□□□□□ -2.52
VPS25Q9BRG1 MIR501-201ENST00000390204 84 ntBASIC-0.69□□□□□ -2.52
VPS25Q9BRG1 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.69□□□□□ -2.52
VPS25Q9BRG1 AL358934.1-201ENST00000432346 324 ntBASIC-0.69□□□□□ -2.52
VPS25Q9BRG1 GPR143P-201ENST00000434155 205 ntBASIC-0.69□□□□□ -2.52
VPS25Q9BRG1 AL512286.1-201ENST00000439244 400 ntBASIC-0.69□□□□□ -2.52
VPS25Q9BRG1 RNU7-185P-201ENST00000459215 60 ntBASIC-0.69□□□□□ -2.52
VPS25Q9BRG1 Y_RNA.638-201ENST00000459374 113 ntBASIC-0.69□□□□□ -2.52
VPS25Q9BRG1 RNU6-469P-201ENST00000516253 101 ntBASIC-0.69□□□□□ -2.52
VPS25Q9BRG1 AC018714.1-201ENST00000605028 208 ntBASIC-0.69□□□□□ -2.52
VPS25Q9BRG1 AL136370.1-201ENST00000608166 691 ntBASIC-0.69□□□□□ -2.52
VPS25Q9BRG1 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.69□□□□□ -2.52
VPS25Q9BRG1 RNU4-92P-201ENST00000363783 136 ntBASIC-0.7□□□□□ -2.52
VPS25Q9BRG1 RNU6-501P-201ENST00000364072 100 ntBASIC-0.7□□□□□ -2.52
VPS25Q9BRG1 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.7□□□□□ -2.52
VPS25Q9BRG1 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.7□□□□□ -2.52
VPS25Q9BRG1 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.7□□□□□ -2.52
VPS25Q9BRG1 AL354751.2-201ENST00000415471 210 ntBASIC-0.7□□□□□ -2.52
VPS25Q9BRG1 RPL30P16-201ENST00000419341 429 ntBASIC-0.7□□□□□ -2.52
VPS25Q9BRG1 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.7□□□□□ -2.52
VPS25Q9BRG1 USP9YP12-201ENST00000450481 570 ntBASIC-0.7□□□□□ -2.52
VPS25Q9BRG1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.7□□□□□ -2.52
VPS25Q9BRG1 AC079140.5-201ENST00000507882 310 ntBASIC-0.7□□□□□ -2.52
VPS25Q9BRG1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.7□□□□□ -2.52
VPS25Q9BRG1 MIR3152-201ENST00000579801 74 ntBASIC-0.7□□□□□ -2.52
VPS25Q9BRG1 U2.17-201ENST00000611454 95 ntBASIC-0.7□□□□□ -2.52
VPS25Q9BRG1 AC016597.2-201ENST00000613256 341 ntBASIC-0.7□□□□□ -2.52
VPS25Q9BRG1 MIR6828-201ENST00000636181 60 ntBASIC-0.7□□□□□ -2.52
VPS25Q9BRG1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.71□□□□□ -2.52
VPS25Q9BRG1 RNY1-201ENST00000364228 113 ntBASIC-0.71□□□□□ -2.52
VPS25Q9BRG1 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.71□□□□□ -2.52
VPS25Q9BRG1 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.71□□□□□ -2.52
VPS25Q9BRG1 RNU6-784P-201ENST00000384330 106 ntBASIC-0.71□□□□□ -2.52
VPS25Q9BRG1 RNU6-83P-201ENST00000384568 112 ntBASIC-0.71□□□□□ -2.52
VPS25Q9BRG1 RNU6-606P-201ENST00000384721 111 ntBASIC-0.71□□□□□ -2.52
VPS25Q9BRG1 MIR329-2-201ENST00000385029 84 ntBASIC-0.71□□□□□ -2.52
VPS25Q9BRG1 MIR1257-201ENST00000408490 117 ntBASIC-0.71□□□□□ -2.52
VPS25Q9BRG1 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.71□□□□□ -2.52
VPS25Q9BRG1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.71□□□□□ -2.52
VPS25Q9BRG1 RNU6-180P-201ENST00000516697 61 ntBASIC-0.71□□□□□ -2.52
VPS25Q9BRG1 SCOCP1-201ENST00000554676 349 ntBASIC-0.71□□□□□ -2.52
VPS25Q9BRG1 MIR3666-201ENST00000607845 111 ntBASIC-0.71□□□□□ -2.52
VPS25Q9BRG1 AL442067.1-201ENST00000613261 223 ntBASIC-0.71□□□□□ -2.52
VPS25Q9BRG1 FAM157A-202ENST00000615155 405 ntBASIC-0.71□□□□□ -2.52
VPS25Q9BRG1 uc_338.4-201ENST00000616635 176 ntBASIC-0.71□□□□□ -2.52
VPS25Q9BRG1 uc_338.22-201ENST00000622722 187 ntBASIC-0.71□□□□□ -2.52
VPS25Q9BRG1 AC106754.1-201ENST00000562632 1513 ntBASIC-0.71□□□□□ -2.52
VPS25Q9BRG1 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.72□□□□□ -2.52
VPS25Q9BRG1 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.72□□□□□ -2.52
VPS25Q9BRG1 AL590002.1-201ENST00000406554 418 ntBASIC-0.72□□□□□ -2.52
VPS25Q9BRG1 RNU6-325P-201ENST00000411132 105 ntBASIC-0.72□□□□□ -2.52
VPS25Q9BRG1 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.72□□□□□ -2.52
VPS25Q9BRG1 AC092447.3-201ENST00000426027 686 ntBASIC-0.72□□□□□ -2.52
VPS25Q9BRG1 HMGN2P22-201ENST00000427588 175 ntBASIC-0.72□□□□□ -2.52
VPS25Q9BRG1 TRBVB-201ENST00000477100 408 ntBASIC-0.72□□□□□ -2.52
VPS25Q9BRG1 AC092436.3-201ENST00000511788 257 ntBASIC-0.72□□□□□ -2.52
VPS25Q9BRG1 SNORA25.10-201ENST00000515926 124 ntBASIC-0.72□□□□□ -2.52
VPS25Q9BRG1 RNU6-848P-201ENST00000515948 107 ntBASIC-0.72□□□□□ -2.52
VPS25Q9BRG1 RNU6-617P-201ENST00000516147 107 ntBASIC-0.72□□□□□ -2.52
VPS25Q9BRG1 RNU6-473P-201ENST00000516164 107 ntBASIC-0.72□□□□□ -2.52
VPS25Q9BRG1 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.72□□□□□ -2.52
VPS25Q9BRG1 AC022878.1-201ENST00000530684 149 ntBASIC-0.72□□□□□ -2.52
VPS25Q9BRG1 AC011712.1-201ENST00000588959 234 ntBASIC-0.72□□□□□ -2.52
VPS25Q9BRG1 MIR4791-201ENST00000607666 84 ntBASIC-0.72□□□□□ -2.52
VPS25Q9BRG1 AC009248.2-201ENST00000619826 254 ntBASIC-0.72□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms