Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
EBF4Q9BQW3 RNU1-96P-201ENST00000364163 162 ntBASIC1.33□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.376-201ENST00000365638 108 ntBASIC1.33□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.380-201ENST00000365663 111 ntBASIC1.33□□□□□ -2.2
EBF4Q9BQW3 AC117470.1-201ENST00000381974 330 ntBASIC1.33□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.439-201ENST00000384119 94 ntBASIC1.33□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.446-201ENST00000384178 104 ntBASIC1.33□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.483-201ENST00000384380 101 ntBASIC1.33□□□□□ -2.2
EBF4Q9BQW3 RNU6-505P-201ENST00000384427 107 ntBASIC1.33□□□□□ -2.2
EBF4Q9BQW3 SNORD115-46-201ENST00000390982 71 ntBASIC1.33□□□□□ -2.2
EBF4Q9BQW3 MRPL35P1-201ENST00000404272 572 ntBASIC1.33□□□□□ -2.2
EBF4Q9BQW3 MIR320B2-201ENST00000408479 138 ntBASIC1.33□□□□□ -2.2
EBF4Q9BQW3 HMGN2P34-201ENST00000437647 269 ntBASIC1.33□□□□□ -2.2
EBF4Q9BQW3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.33□□□□□ -2.2
EBF4Q9BQW3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.33□□□□□ -2.2
EBF4Q9BQW3 HMGN2P23-201ENST00000456759 269 ntBASIC1.33□□□□□ -2.2
EBF4Q9BQW3 RNU2-34P-201ENST00000516534 121 ntBASIC1.33□□□□□ -2.2
EBF4Q9BQW3 SNORA31.24-201ENST00000517232 57 ntBASIC1.33□□□□□ -2.2
EBF4Q9BQW3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.33□□□□□ -2.2
EBF4Q9BQW3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.33□□□□□ -2.2
EBF4Q9BQW3 MIR3145-201ENST00000580727 82 ntBASIC1.33□□□□□ -2.2
EBF4Q9BQW3 MIR3683-201ENST00000580847 82 ntBASIC1.33□□□□□ -2.2
EBF4Q9BQW3 MIR4423-201ENST00000580922 80 ntBASIC1.33□□□□□ -2.2
EBF4Q9BQW3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.33□□□□□ -2.2
EBF4Q9BQW3 AL353149.1-201ENST00000610667 244 ntBASIC1.33□□□□□ -2.2
EBF4Q9BQW3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.33□□□□□ -2.2
EBF4Q9BQW3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.33□□□□□ -2.2
EBF4Q9BQW3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.33□□□□□ -2.2
EBF4Q9BQW3 AL161722.3-201ENST00000605789 2983 ntBASIC1.33□□□□□ -2.2
EBF4Q9BQW3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 SNORD113-8-201ENST00000363497 74 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.183-201ENST00000363882 113 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 RNU6-60P-201ENST00000364792 103 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.287-201ENST00000364853 94 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 RNU6-1175P-201ENST00000365200 107 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.541-201ENST00000384640 113 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.570-201ENST00000384750 101 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.574-201ENST00000384766 95 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 MIR758-201ENST00000390227 88 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 AL355796.1-201ENST00000406706 323 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 MIR1185-2-201ENST00000408687 86 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 MTCYBP9-201ENST00000431021 303 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 HSPE1P25-201ENST00000455484 251 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 AC005908.1-201ENST00000468701 347 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 AC114982.1-201ENST00000469402 321 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 RNU6-295P-201ENST00000516901 104 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 AC027419.1-201ENST00000522976 328 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 AC084364.2-201ENST00000546924 395 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 AL161670.1-201ENST00000554348 137 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.32□□□□□ -2.2
EBF4Q9BQW3 MIR3945-201ENST00000581853 98 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 AL645939.4-201ENST00000604495 135 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 AC069114.2-201ENST00000604699 304 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 AL138825.1-201ENST00000618587 192 ntBASIC1.32□□□□□ -2.2
EBF4Q9BQW3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
EBF4Q9BQW3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
EBF4Q9BQW3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
EBF4Q9BQW3 snoU2-30.2-201ENST00000362805 70 ntBASIC1.31□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.84-201ENST00000363011 104 ntBASIC1.31□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.124-201ENST00000363339 93 ntBASIC1.31□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.172-201ENST00000363765 102 ntBASIC1.31□□□□□ -2.2
EBF4Q9BQW3 SNORA67.6-201ENST00000391093 99 ntBASIC1.31□□□□□ -2.2
EBF4Q9BQW3 CYCSP49-201ENST00000420810 319 ntBASIC1.31□□□□□ -2.2
EBF4Q9BQW3 AC025465.3-201ENST00000510570 311 ntBASIC1.31□□□□□ -2.2
EBF4Q9BQW3 MTCO2P24-201ENST00000515611 426 ntBASIC1.31□□□□□ -2.2
EBF4Q9BQW3 RNU6-496P-201ENST00000516145 99 ntBASIC1.31□□□□□ -2.2
EBF4Q9BQW3 RNU1-41P-201ENST00000516161 162 ntBASIC1.31□□□□□ -2.2
EBF4Q9BQW3 RNU1-48P-201ENST00000516400 162 ntBASIC1.31□□□□□ -2.2
EBF4Q9BQW3 AC025647.1-201ENST00000517879 253 ntBASIC1.31□□□□□ -2.2
EBF4Q9BQW3 AP003733.2-201ENST00000529409 171 ntBASIC1.31□□□□□ -2.2
EBF4Q9BQW3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.31□□□□□ -2.2
EBF4Q9BQW3 SNORD53B-201ENST00000577887 78 ntBASIC1.31□□□□□ -2.2
EBF4Q9BQW3 AC005176.2-201ENST00000596933 147 ntBASIC1.31□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.772-201ENST00000606692 102 ntBASIC1.31□□□□□ -2.2
EBF4Q9BQW3 MIR376A1-201ENST00000616574 68 ntBASIC1.31□□□□□ -2.2
EBF4Q9BQW3 snoZ196.1-201ENST00000625269 89 ntBASIC1.31□□□□□ -2.2
EBF4Q9BQW3 MIR3674-201ENST00000636576 68 ntBASIC1.31□□□□□ -2.2
EBF4Q9BQW3 AC010615.1-201ENST00000594254 1764 ntBASIC1.3□□□□□ -2.2
EBF4Q9BQW3 MIR424-201ENST00000362227 98 ntBASIC1.3□□□□□ -2.2
EBF4Q9BQW3 U3.8-201ENST00000363675 217 ntBASIC1.3□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.193-201ENST00000363979 102 ntBASIC1.3□□□□□ -2.2
EBF4Q9BQW3 SNORA63D-201ENST00000364359 132 ntBASIC1.3□□□□□ -2.2
EBF4Q9BQW3 RNU6-417P-201ENST00000384712 107 ntBASIC1.3□□□□□ -2.2
EBF4Q9BQW3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
EBF4Q9BQW3 AL135790.2-201ENST00000437701 267 ntBASIC1.3□□□□□ -2.2
EBF4Q9BQW3 AL731563.1-201ENST00000442202 214 ntBASIC1.3□□□□□ -2.2
EBF4Q9BQW3 RNU6-221P-201ENST00000459541 99 ntBASIC1.3□□□□□ -2.2
EBF4Q9BQW3 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.3□□□□□ -2.2
EBF4Q9BQW3 MTND1P19-201ENST00000511780 315 ntBASIC1.3□□□□□ -2.2
EBF4Q9BQW3 AC074133.1-201ENST00000515696 183 ntBASIC1.3□□□□□ -2.2
EBF4Q9BQW3 Y_RNA.680-201ENST00000516441 93 ntBASIC1.3□□□□□ -2.2
EBF4Q9BQW3 RNU2-12P-201ENST00000517216 168 ntBASIC1.3□□□□□ -2.2
EBF4Q9BQW3 AC022441.3-201ENST00000605737 136 ntBASIC1.3□□□□□ -2.2
EBF4Q9BQW3 AP001282.2-201ENST00000616149 309 ntBASIC1.3□□□□□ -2.2
EBF4Q9BQW3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.3□□□□□ -2.2
EBF4Q9BQW3 AC068700.1-201ENST00000565862 3754 ntBASIC1.3□□□□□ -2.2
EBF4Q9BQW3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
EBF4Q9BQW3 WWP1P1-201ENST00000466609 2769 ntBASIC1.29□□□□□ -2.2
EBF4Q9BQW3 MIR410-201ENST00000362222 80 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms