Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.23□□□□□ -2.45
LYSMD1Q96S90 AL593851.1-201ENST00000426171 157 ntBASIC-0.23□□□□□ -2.45
LYSMD1Q96S90 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-0.23□□□□□ -2.45
LYSMD1Q96S90 RPL23AP54-201ENST00000495129 419 ntBASIC-0.23□□□□□ -2.45
LYSMD1Q96S90 MTCO1P29-201ENST00000496868 288 ntBASIC-0.23□□□□□ -2.45
LYSMD1Q96S90 RNU6-189P-201ENST00000516120 101 ntBASIC-0.23□□□□□ -2.45
LYSMD1Q96S90 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-0.23□□□□□ -2.45
LYSMD1Q96S90 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.23□□□□□ -2.45
LYSMD1Q96S90 MTND2P38-201ENST00000522536 667 ntBASIC-0.23□□□□□ -2.45
LYSMD1Q96S90 AC092747.3-201ENST00000603769 301 ntBASIC-0.23□□□□□ -2.45
LYSMD1Q96S90 SNORD50.1-201ENST00000362987 71 ntBASIC-0.24□□□□□ -2.45
LYSMD1Q96S90 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.24□□□□□ -2.45
LYSMD1Q96S90 SNORD45.3-201ENST00000363836 72 ntBASIC-0.24□□□□□ -2.45
LYSMD1Q96S90 RNU6-280P-201ENST00000364145 104 ntBASIC-0.24□□□□□ -2.45
LYSMD1Q96S90 RNU4-9P-201ENST00000364951 139 ntBASIC-0.24□□□□□ -2.45
LYSMD1Q96S90 AC117470.1-201ENST00000381974 330 ntBASIC-0.24□□□□□ -2.45
LYSMD1Q96S90 MIR644A-201ENST00000385262 94 ntBASIC-0.24□□□□□ -2.45
LYSMD1Q96S90 SNORD28B-201ENST00000390993 75 ntBASIC-0.24□□□□□ -2.45
LYSMD1Q96S90 MTCO2P33-201ENST00000402100 465 ntBASIC-0.24□□□□□ -2.45
LYSMD1Q96S90 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.24□□□□□ -2.45
LYSMD1Q96S90 AC073464.1-201ENST00000429823 534 ntBASIC-0.24□□□□□ -2.45
LYSMD1Q96S90 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.24□□□□□ -2.45
LYSMD1Q96S90 AL033528.1-201ENST00000453780 140 ntBASIC-0.24□□□□□ -2.45
LYSMD1Q96S90 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.24□□□□□ -2.45
LYSMD1Q96S90 AC093303.1-201ENST00000514549 295 ntBASIC-0.24□□□□□ -2.45
LYSMD1Q96S90 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.24□□□□□ -2.45
LYSMD1Q96S90 MTND1P8-201ENST00000571424 950 ntBASIC-0.24□□□□□ -2.45
LYSMD1Q96S90 AC020891.4-201ENST00000605745 93 ntBASIC-0.24□□□□□ -2.45
LYSMD1Q96S90 AF250324.2-201ENST00000608299 610 ntBASIC-0.24□□□□□ -2.45
LYSMD1Q96S90 AC022306.3-201ENST00000619930 550 ntBASIC-0.24□□□□□ -2.45
LYSMD1Q96S90 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.24□□□□□ -2.45
LYSMD1Q96S90 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.25□□□□□ -2.45
LYSMD1Q96S90 RNA5SP257-201ENST00000363023 116 ntBASIC-0.25□□□□□ -2.45
LYSMD1Q96S90 SNORD115-32-201ENST00000364079 82 ntBASIC-0.25□□□□□ -2.45
LYSMD1Q96S90 MIR145-201ENST00000384967 88 ntBASIC-0.25□□□□□ -2.45
LYSMD1Q96S90 RNU6-159P-201ENST00000391080 106 ntBASIC-0.25□□□□□ -2.45
LYSMD1Q96S90 RNU2-54P-201ENST00000410299 190 ntBASIC-0.25□□□□□ -2.45
LYSMD1Q96S90 RNU2-59P-201ENST00000410482 191 ntBASIC-0.25□□□□□ -2.45
LYSMD1Q96S90 MTCO2P16-201ENST00000436962 677 ntBASIC-0.25□□□□□ -2.45
LYSMD1Q96S90 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.25□□□□□ -2.45
LYSMD1Q96S90 SUMO1P2-201ENST00000452524 304 ntBASIC-0.25□□□□□ -2.45
LYSMD1Q96S90 AC079354.2-201ENST00000453523 154 ntBASIC-0.25□□□□□ -2.45
LYSMD1Q96S90 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.25□□□□□ -2.45
LYSMD1Q96S90 TPTE2P5-203ENST00000458118 728 ntBASIC-0.25□□□□□ -2.45
LYSMD1Q96S90 RNU7-56P-201ENST00000458744 62 ntBASIC-0.25□□□□□ -2.45
LYSMD1Q96S90 RNU7-63P-201ENST00000459054 62 ntBASIC-0.25□□□□□ -2.45
LYSMD1Q96S90 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.25□□□□□ -2.45
LYSMD1Q96S90 SNORA40.12-201ENST00000516329 111 ntBASIC-0.25□□□□□ -2.45
LYSMD1Q96S90 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.25□□□□□ -2.45
LYSMD1Q96S90 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-0.25□□□□□ -2.45
LYSMD1Q96S90 AC141557.1-201ENST00000540982 400 ntBASIC-0.25□□□□□ -2.45
LYSMD1Q96S90 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-0.25□□□□□ -2.45
LYSMD1Q96S90 CPDP1-201ENST00000579660 283 ntBASIC-0.25□□□□□ -2.45
LYSMD1Q96S90 U8.5-201ENST00000364528 136 ntBASIC-0.26□□□□□ -2.45
LYSMD1Q96S90 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.26□□□□□ -2.45
LYSMD1Q96S90 RNU6-514P-201ENST00000384208 107 ntBASIC-0.26□□□□□ -2.45
LYSMD1Q96S90 RNU6-929P-201ENST00000384429 107 ntBASIC-0.26□□□□□ -2.45
LYSMD1Q96S90 RNU6-790P-201ENST00000384479 105 ntBASIC-0.26□□□□□ -2.45
LYSMD1Q96S90 RNY3P9-201ENST00000384727 106 ntBASIC-0.26□□□□□ -2.45
LYSMD1Q96S90 MTCYBP4-201ENST00000401524 249 ntBASIC-0.26□□□□□ -2.45
LYSMD1Q96S90 AL353572.1-201ENST00000442490 417 ntBASIC-0.26□□□□□ -2.45
LYSMD1Q96S90 RPL30P10-201ENST00000488148 337 ntBASIC-0.26□□□□□ -2.45
LYSMD1Q96S90 SNORD45.4-201ENST00000516629 73 ntBASIC-0.26□□□□□ -2.45
LYSMD1Q96S90 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.26□□□□□ -2.45
LYSMD1Q96S90 AL355375.2-201ENST00000574825 175 ntBASIC-0.26□□□□□ -2.45
LYSMD1Q96S90 MIR548AR-201ENST00000582191 57 ntBASIC-0.26□□□□□ -2.45
LYSMD1Q96S90 MIR5692C1-201ENST00000585309 91 ntBASIC-0.26□□□□□ -2.45
LYSMD1Q96S90 AC004223.4-201ENST00000612426 332 ntBASIC-0.26□□□□□ -2.45
LYSMD1Q96S90 AC072046.2-201ENST00000618366 268 ntBASIC-0.26□□□□□ -2.45
LYSMD1Q96S90 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.26□□□□□ -2.45
LYSMD1Q96S90 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.27□□□□□ -2.45
LYSMD1Q96S90 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.27□□□□□ -2.45
LYSMD1Q96S90 RNU6-117P-201ENST00000365415 107 ntBASIC-0.27□□□□□ -2.45
LYSMD1Q96S90 RNU6-996P-201ENST00000365438 107 ntBASIC-0.27□□□□□ -2.45
LYSMD1Q96S90 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.27□□□□□ -2.45
LYSMD1Q96S90 RNU6-214P-201ENST00000384130 107 ntBASIC-0.27□□□□□ -2.45
LYSMD1Q96S90 RNU6-297P-201ENST00000384636 107 ntBASIC-0.27□□□□□ -2.45
LYSMD1Q96S90 Y_RNA.560-201ENST00000384689 102 ntBASIC-0.27□□□□□ -2.45
LYSMD1Q96S90 RNU6-127P-201ENST00000390897 107 ntBASIC-0.27□□□□□ -2.45
LYSMD1Q96S90 MIR938-201ENST00000401216 83 ntBASIC-0.27□□□□□ -2.45
LYSMD1Q96S90 SNORD100-201ENST00000408573 76 ntBASIC-0.27□□□□□ -2.45
LYSMD1Q96S90 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.27□□□□□ -2.45
LYSMD1Q96S90 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.27□□□□□ -2.45
LYSMD1Q96S90 MTCO2P11-201ENST00000431069 680 ntBASIC-0.27□□□□□ -2.45
LYSMD1Q96S90 AL356010.1-201ENST00000456364 102 ntBASIC-0.27□□□□□ -2.45
LYSMD1Q96S90 SNORA19.2-201ENST00000516013 114 ntBASIC-0.27□□□□□ -2.45
LYSMD1Q96S90 AC133485.4-201ENST00000561835 220 ntBASIC-0.27□□□□□ -2.45
LYSMD1Q96S90 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.27□□□□□ -2.45
LYSMD1Q96S90 AC008608.1-201ENST00000603910 127 ntBASIC-0.27□□□□□ -2.45
LYSMD1Q96S90 AP000753.3-201ENST00000604083 169 ntBASIC-0.27□□□□□ -2.45
LYSMD1Q96S90 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.27□□□□□ -2.45
LYSMD1Q96S90 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.27□□□□□ -2.45
LYSMD1Q96S90 MIR620-201ENST00000385232 95 ntBASIC-0.28□□□□□ -2.45
LYSMD1Q96S90 SNORD37.1-201ENST00000390968 65 ntBASIC-0.28□□□□□ -2.45
LYSMD1Q96S90 AL354751.2-201ENST00000415471 210 ntBASIC-0.28□□□□□ -2.45
LYSMD1Q96S90 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.28□□□□□ -2.45
LYSMD1Q96S90 MTATP6P18-201ENST00000417994 673 ntBASIC-0.28□□□□□ -2.45
LYSMD1Q96S90 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.28□□□□□ -2.45
LYSMD1Q96S90 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.28□□□□□ -2.45
LYSMD1Q96S90 AL358934.1-201ENST00000432346 324 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms