Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RPS27P1-201ENST00000450552 247 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 MTCO3P10-201ENST00000455912 772 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.92□□□□□ -2.26
COL21A1Q96P44 AL133373.1-201ENST00000497098 94 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 Y_RNA.702-201ENST00000516843 96 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 Y_RNA.706-201ENST00000516933 99 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 RNU1-117P-201ENST00000517041 158 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 AC134698.4-201ENST00000523451 826 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 FRG2DP-202ENST00000566967 323 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 AL929325.1-201ENST00000603096 117 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 7SK.7-201ENST00000603504 247 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 AC100812.1-201ENST00000607622 580 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 AC012676.2-201ENST00000619258 186 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 MTND4LP32-201ENST00000636111 270 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 MIR6767-201ENST00000637302 66 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 MIR1302-1-201ENST00000637932 143 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
COL21A1Q96P44 Y_RNA.70-201ENST00000362886 110 ntBASIC0.91□□□□□ -2.26
COL21A1Q96P44 RNU6-890P-201ENST00000384121 107 ntBASIC0.91□□□□□ -2.26
COL21A1Q96P44 SNORA25-201ENST00000384384 134 ntBASIC0.91□□□□□ -2.26
COL21A1Q96P44 SNORD116-29-201ENST00000384516 83 ntBASIC0.91□□□□□ -2.26
COL21A1Q96P44 Y_RNA.529-201ENST00000384586 119 ntBASIC0.91□□□□□ -2.26
COL21A1Q96P44 MIR222-201ENST00000384992 110 ntBASIC0.91□□□□□ -2.26
COL21A1Q96P44 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
COL21A1Q96P44 RNU6-1009P-201ENST00000390996 107 ntBASIC0.91□□□□□ -2.26
COL21A1Q96P44 RNA5SP109-201ENST00000391010 116 ntBASIC0.91□□□□□ -2.26
COL21A1Q96P44 MIR190B-201ENST00000401119 79 ntBASIC0.91□□□□□ -2.26
COL21A1Q96P44 MRPL42P3-201ENST00000401492 326 ntBASIC0.91□□□□□ -2.26
COL21A1Q96P44 MIR1185-2-201ENST00000408687 86 ntBASIC0.91□□□□□ -2.26
COL21A1Q96P44 RPL23AP50-201ENST00000434149 455 ntBASIC0.91□□□□□ -2.26
COL21A1Q96P44 U8.22-201ENST00000459141 133 ntBASIC0.91□□□□□ -2.26
COL21A1Q96P44 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.91□□□□□ -2.26
COL21A1Q96P44 RNU7-99P-201ENST00000516271 62 ntBASIC0.91□□□□□ -2.26
COL21A1Q96P44 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.91□□□□□ -2.26
COL21A1Q96P44 SNORA25.14-201ENST00000516481 132 ntBASIC0.91□□□□□ -2.26
COL21A1Q96P44 AC093027.1-201ENST00000546698 429 ntBASIC0.91□□□□□ -2.26
COL21A1Q96P44 AK6P2-201ENST00000549020 471 ntBASIC0.91□□□□□ -2.26
COL21A1Q96P44 AL355375.2-201ENST00000574825 175 ntBASIC0.91□□□□□ -2.26
COL21A1Q96P44 MIR5695-201ENST00000579717 85 ntBASIC0.91□□□□□ -2.26
COL21A1Q96P44 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
COL21A1Q96P44 AL513534.2-201ENST00000603836 250 ntBASIC0.91□□□□□ -2.26
COL21A1Q96P44 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.91□□□□□ -2.26
COL21A1Q96P44 AC112487.2-201ENST00000637950 304 ntBASIC0.91□□□□□ -2.26
COL21A1Q96P44 AL391516.1-201ENST00000554380 2449 ntBASIC0.9□□□□□ -2.26
COL21A1Q96P44 MTND5P16-201ENST00000460269 1703 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 RNU6-727P-201ENST00000363592 107 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 Y_RNA.263-201ENST00000364659 114 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 RNU6-99P-201ENST00000364721 107 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 SNORD87-201ENST00000364849 89 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 Y_RNA.356-201ENST00000365475 113 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 Y_RNA.387-201ENST00000383918 102 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 RNU6-1297P-201ENST00000384415 104 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 RNU6-700P-201ENST00000391043 107 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 SNORA75.6-201ENST00000391318 127 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 MTND4LP11-201ENST00000422184 280 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 USP9YP16-201ENST00000430287 407 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 AC093019.1-201ENST00000443135 252 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 USP9YP23-201ENST00000455085 407 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 RPL30P15-201ENST00000457129 321 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 RNU7-87P-201ENST00000459343 62 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 AC091179.3-201ENST00000474761 144 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 RPL17P19-201ENST00000489069 552 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 FGF7P4-201ENST00000509595 295 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 RNU6-1114P-201ENST00000516022 107 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 RNA5SP404-201ENST00000517118 132 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.9□□□□□ -2.27
COL21A1Q96P44 MIR5690-201ENST00000583739 73 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 AC005899.2-201ENST00000584353 90 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 AC125232.2-201ENST00000592457 143 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 SNORA28-201ENST00000606769 126 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 MIR1244-1-201ENST00000612829 85 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 AC025253.1-201ENST00000613623 543 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 Y_RNA.804-201ENST00000615262 101 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 MIR8054-201ENST00000620877 86 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 AC027335.2-201ENST00000624030 375 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 MIR1244-3-201ENST00000635744 85 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 MIR1244-2-201ENST00000636449 85 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 MIR1244-4-202ENST00000636813 85 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 U6.108-201ENST00000637764 58 ntBASIC0.9□□□□□ -2.27
COL21A1Q96P44 Y_RNA.58-201ENST00000362807 102 ntBASIC0.89□□□□□ -2.27
COL21A1Q96P44 Y_RNA.154-201ENST00000363624 102 ntBASIC0.89□□□□□ -2.27
COL21A1Q96P44 Y_RNA.259-201ENST00000364619 101 ntBASIC0.89□□□□□ -2.27
COL21A1Q96P44 RNY3P1-201ENST00000365085 102 ntBASIC0.89□□□□□ -2.27
COL21A1Q96P44 RNY3-201ENST00000365484 102 ntBASIC0.89□□□□□ -2.27
COL21A1Q96P44 Y_RNA.358-201ENST00000365491 99 ntBASIC0.89□□□□□ -2.27
COL21A1Q96P44 Y_RNA.364-201ENST00000365532 101 ntBASIC0.89□□□□□ -2.27
COL21A1Q96P44 Y_RNA.415-201ENST00000384012 112 ntBASIC0.89□□□□□ -2.27
COL21A1Q96P44 RNU6-281P-201ENST00000384212 103 ntBASIC0.89□□□□□ -2.27
COL21A1Q96P44 RNU6-793P-201ENST00000384233 104 ntBASIC0.89□□□□□ -2.27
COL21A1Q96P44 Y_RNA.557-201ENST00000384680 107 ntBASIC0.89□□□□□ -2.27
COL21A1Q96P44 MIR562-201ENST00000384894 95 ntBASIC0.89□□□□□ -2.27
COL21A1Q96P44 RNY4P36-201ENST00000391116 96 ntBASIC0.89□□□□□ -2.27
COL21A1Q96P44 RNU6-1001P-201ENST00000411265 100 ntBASIC0.89□□□□□ -2.27
COL21A1Q96P44 MTCYBP10-201ENST00000424905 650 ntBASIC0.89□□□□□ -2.27
COL21A1Q96P44 EIF1P2-201ENST00000428233 350 ntBASIC0.89□□□□□ -2.27
COL21A1Q96P44 AC245047.3-201ENST00000429428 127 ntBASIC0.89□□□□□ -2.27
COL21A1Q96P44 AC092423.1-201ENST00000430165 186 ntBASIC0.89□□□□□ -2.27
COL21A1Q96P44 DYNLT3P2-201ENST00000442517 295 ntBASIC0.89□□□□□ -2.27
COL21A1Q96P44 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.89□□□□□ -2.27
COL21A1Q96P44 ELOCP24-201ENST00000456370 334 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 182.6 ms