Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RNU6-205P-201ENST00000390858 107 ntBASIC-1.56□□□□□ -2.66
CFAP54Q96N23 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.56□□□□□ -2.66
CFAP54Q96N23 RNU6-1098P-201ENST00000516772 96 ntBASIC-1.56□□□□□ -2.66
CFAP54Q96N23 ZNF971P-201ENST00000562068 1249 ntBASIC-1.56□□□□□ -2.66
CFAP54Q96N23 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-1.56□□□□□ -2.66
CFAP54Q96N23 U6.108-201ENST00000637764 58 ntBASIC-1.56□□□□□ -2.66
CFAP54Q96N23 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.56□□□□□ -2.66
CFAP54Q96N23 RNU6-622P-201ENST00000384272 103 ntBASIC-1.56□□□□□ -2.66
CFAP54Q96N23 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.56□□□□□ -2.66
CFAP54Q96N23 AL138752.1-201ENST00000452964 351 ntBASIC-1.56□□□□□ -2.66
CFAP54Q96N23 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-1.56□□□□□ -2.66
CFAP54Q96N23 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.57□□□□□ -2.66
CFAP54Q96N23 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.57□□□□□ -2.66
CFAP54Q96N23 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-1.57□□□□□ -2.66
CFAP54Q96N23 AC104073.1-201ENST00000451988 151 ntBASIC-1.57□□□□□ -2.66
CFAP54Q96N23 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-1.57□□□□□ -2.66
CFAP54Q96N23 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-1.57□□□□□ -2.66
CFAP54Q96N23 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.57□□□□□ -2.66
CFAP54Q96N23 RNU6-932P-201ENST00000391108 106 ntBASIC-1.57□□□□□ -2.66
CFAP54Q96N23 RNU1-142P-201ENST00000516682 145 ntBASIC-1.57□□□□□ -2.66
CFAP54Q96N23 MTND2P38-201ENST00000522536 667 ntBASIC-1.57□□□□□ -2.66
CFAP54Q96N23 AP001372.4-201ENST00000524889 472 ntBASIC-1.57□□□□□ -2.66
CFAP54Q96N23 AC099785.1-201ENST00000605697 437 ntBASIC-1.57□□□□□ -2.66
CFAP54Q96N23 AC097478.2-201ENST00000610572 514 ntBASIC-1.57□□□□□ -2.66
CFAP54Q96N23 RNU6-580P-201ENST00000365159 107 ntBASIC-1.58□□□□□ -2.66
CFAP54Q96N23 MIR1185-2-201ENST00000408687 86 ntBASIC-1.58□□□□□ -2.66
CFAP54Q96N23 RNU4-61P-201ENST00000411243 107 ntBASIC-1.58□□□□□ -2.66
CFAP54Q96N23 MTCYBP5-201ENST00000423752 1135 ntBASIC-1.58□□□□□ -2.66
CFAP54Q96N23 AC005002.2-201ENST00000438228 269 ntBASIC-1.58□□□□□ -2.66
CFAP54Q96N23 AC098614.3-201ENST00000438957 440 ntBASIC-1.58□□□□□ -2.66
CFAP54Q96N23 RPL39P25-201ENST00000449384 154 ntBASIC-1.58□□□□□ -2.66
CFAP54Q96N23 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-1.58□□□□□ -2.66
CFAP54Q96N23 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.58□□□□□ -2.66
CFAP54Q96N23 SNORD14.1-201ENST00000365609 90 ntBASIC-1.58□□□□□ -2.66
CFAP54Q96N23 RNU6-31P-201ENST00000384388 108 ntBASIC-1.58□□□□□ -2.66
CFAP54Q96N23 MIR7-1-201ENST00000384871 110 ntBASIC-1.58□□□□□ -2.66
CFAP54Q96N23 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.58□□□□□ -2.66
CFAP54Q96N23 MTCO3P8-201ENST00000453691 755 ntBASIC-1.58□□□□□ -2.66
CFAP54Q96N23 RNU6-488P-201ENST00000515918 99 ntBASIC-1.58□□□□□ -2.66
CFAP54Q96N23 AL590396.2-201ENST00000636511 1041 ntBASIC-1.58□□□□□ -2.66
CFAP54Q96N23 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.58□□□□□ -2.66
CFAP54Q96N23 RNU6-658P-201ENST00000384606 106 ntBASIC-1.58□□□□□ -2.66
CFAP54Q96N23 RPP40P1-201ENST00000426762 456 ntBASIC-1.58□□□□□ -2.66
CFAP54Q96N23 BTF3P15-201ENST00000455606 336 ntBASIC-1.58□□□□□ -2.66
CFAP54Q96N23 SNORA25.13-201ENST00000516395 103 ntBASIC-1.58□□□□□ -2.66
CFAP54Q96N23 AC245505.1-201ENST00000556398 224 ntBASIC-1.58□□□□□ -2.66
CFAP54Q96N23 RNU6-78P-201ENST00000362897 107 ntBASIC-1.59□□□□□ -2.66
CFAP54Q96N23 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.59□□□□□ -2.66
CFAP54Q96N23 MIRLET7B-201ENST00000385140 83 ntBASIC-1.59□□□□□ -2.66
CFAP54Q96N23 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.59□□□□□ -2.66
CFAP54Q96N23 MIR190B-201ENST00000401119 79 ntBASIC-1.59□□□□□ -2.66
CFAP54Q96N23 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.59□□□□□ -2.66
CFAP54Q96N23 SNORA25.16-201ENST00000516741 121 ntBASIC-1.59□□□□□ -2.66
CFAP54Q96N23 AC060788.1-201ENST00000521318 469 ntBASIC-1.59□□□□□ -2.66
CFAP54Q96N23 AC079610.2-201ENST00000604818 690 ntBASIC-1.59□□□□□ -2.66
CFAP54Q96N23 AC010999.1-201ENST00000611856 324 ntBASIC-1.59□□□□□ -2.66
CFAP54Q96N23 RNU6-1025P-201ENST00000410629 104 ntBASIC-1.59□□□□□ -2.66
CFAP54Q96N23 MTND3P17-201ENST00000416968 344 ntBASIC-1.59□□□□□ -2.66
CFAP54Q96N23 RNU6-850P-201ENST00000516934 103 ntBASIC-1.59□□□□□ -2.66
CFAP54Q96N23 AC104576.1-201ENST00000524225 88 ntBASIC-1.59□□□□□ -2.66
CFAP54Q96N23 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-1.59□□□□□ -2.66
CFAP54Q96N23 HMGB1P51-201ENST00000605166 638 ntBASIC-1.59□□□□□ -2.66
CFAP54Q96N23 RNU6-230P-201ENST00000362457 104 ntBASIC-1.6□□□□□ -2.66
CFAP54Q96N23 SNORD116-20-201ENST00000384529 92 ntBASIC-1.6□□□□□ -2.66
CFAP54Q96N23 RPS29P13-201ENST00000402041 169 ntBASIC-1.6□□□□□ -2.66
CFAP54Q96N23 MTATP6P20-201ENST00000414147 562 ntBASIC-1.6□□□□□ -2.66
CFAP54Q96N23 RNU6-1146P-201ENST00000516282 102 ntBASIC-1.6□□□□□ -2.66
CFAP54Q96N23 SNORA25.17-201ENST00000517184 124 ntBASIC-1.6□□□□□ -2.66
CFAP54Q96N23 MIR5704-201ENST00000584029 77 ntBASIC-1.6□□□□□ -2.66
CFAP54Q96N23 AC069431.2-201ENST00000604149 1099 ntBASIC-1.6□□□□□ -2.66
CFAP54Q96N23 SNORA28-201ENST00000606769 126 ntBASIC-1.6□□□□□ -2.66
CFAP54Q96N23 AL049777.1-201ENST00000622740 518 ntBASIC-1.6□□□□□ -2.66
CFAP54Q96N23 MIR4251-201ENST00000635819 61 ntBASIC-1.6□□□□□ -2.66
CFAP54Q96N23 RNU6-987P-201ENST00000384759 104 ntBASIC-1.6□□□□□ -2.67
CFAP54Q96N23 MIR19A-201ENST00000384878 82 ntBASIC-1.6□□□□□ -2.67
CFAP54Q96N23 SERF1AP1-201ENST00000514575 187 ntBASIC-1.6□□□□□ -2.67
CFAP54Q96N23 AC112206.4-201ENST00000515142 405 ntBASIC-1.6□□□□□ -2.67
CFAP54Q96N23 AC110760.3-202ENST00000515177 371 ntBASIC-1.6□□□□□ -2.67
CFAP54Q96N23 RNU7-188P-201ENST00000517063 64 ntBASIC-1.6□□□□□ -2.67
CFAP54Q96N23 AP001033.2-201ENST00000609701 1003 ntBASIC-1.6□□□□□ -2.67
CFAP54Q96N23 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.6□□□□□ -2.67
CFAP54Q96N23 RNU6-188P-201ENST00000364207 107 ntBASIC-1.6□□□□□ -2.67
CFAP54Q96N23 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.6□□□□□ -2.67
CFAP54Q96N23 RNU6-125P-201ENST00000384505 107 ntBASIC-1.6□□□□□ -2.67
CFAP54Q96N23 AC104629.2-201ENST00000468627 598 ntBASIC-1.6□□□□□ -2.67
CFAP54Q96N23 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-1.6□□□□□ -2.67
CFAP54Q96N23 AC009994.1-201ENST00000606889 253 ntBASIC-1.6□□□□□ -2.67
CFAP54Q96N23 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.61□□□□□ -2.67
CFAP54Q96N23 MIR181B2-201ENST00000385004 89 ntBASIC-1.61□□□□□ -2.67
CFAP54Q96N23 MIR516B2-201ENST00000385190 85 ntBASIC-1.61□□□□□ -2.67
CFAP54Q96N23 SNORA40C-201ENST00000391285 128 ntBASIC-1.61□□□□□ -2.67
CFAP54Q96N23 RNU2-54P-201ENST00000410299 190 ntBASIC-1.61□□□□□ -2.67
CFAP54Q96N23 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.61□□□□□ -2.67
CFAP54Q96N23 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-1.61□□□□□ -2.67
CFAP54Q96N23 MTCO3P38-201ENST00000468910 766 ntBASIC-1.61□□□□□ -2.67
CFAP54Q96N23 MIR1273C-201ENST00000578669 77 ntBASIC-1.61□□□□□ -2.67
CFAP54Q96N23 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.61□□□□□ -2.67
CFAP54Q96N23 AP001330.5-201ENST00000607176 411 ntBASIC-1.61□□□□□ -2.67
CFAP54Q96N23 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-1.61□□□□□ -2.67
CFAP54Q96N23 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.61□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms