Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
USP47Q96K76 RNU6-376P-201ENST00000384731 106 ntBASIC0.72□□□□□ -2.29
USP47Q96K76 MIR562-201ENST00000384894 95 ntBASIC0.72□□□□□ -2.29
USP47Q96K76 MTCYBP4-201ENST00000401524 249 ntBASIC0.72□□□□□ -2.29
USP47Q96K76 AL606490.4-201ENST00000423117 127 ntBASIC0.72□□□□□ -2.29
USP47Q96K76 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.72□□□□□ -2.29
USP47Q96K76 LINC01399-202ENST00000458450 244 ntBASIC0.72□□□□□ -2.29
USP47Q96K76 RNU6-1114P-201ENST00000516022 107 ntBASIC0.72□□□□□ -2.29
USP47Q96K76 RNU6-1291P-201ENST00000516591 104 ntBASIC0.72□□□□□ -2.29
USP47Q96K76 RNU6-273P-201ENST00000516937 96 ntBASIC0.72□□□□□ -2.29
USP47Q96K76 AC136628.3-201ENST00000521868 290 ntBASIC0.72□□□□□ -2.29
USP47Q96K76 AC093023.1-201ENST00000547375 507 ntBASIC0.72□□□□□ -2.29
USP47Q96K76 AC091178.2-201ENST00000584401 117 ntBASIC0.72□□□□□ -2.29
USP47Q96K76 MIR3942-201ENST00000585264 109 ntBASIC0.72□□□□□ -2.29
USP47Q96K76 AL117336.2-201ENST00000602435 335 ntBASIC0.72□□□□□ -2.29
USP47Q96K76 PRELID3BP2-201ENST00000605362 201 ntBASIC0.72□□□□□ -2.29
USP47Q96K76 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.72□□□□□ -2.29
USP47Q96K76 AC024614.3-201ENST00000637860 256 ntBASIC0.72□□□□□ -2.29
USP47Q96K76 AC023934.1-201ENST00000574529 2389 ntBASIC0.72□□□□□ -2.29
USP47Q96K76 RNU6-222P-201ENST00000362438 107 ntBASIC0.71□□□□□ -2.3
USP47Q96K76 RNU6-596P-201ENST00000365395 98 ntBASIC0.71□□□□□ -2.3
USP47Q96K76 RNA5SP482-201ENST00000391269 118 ntBASIC0.71□□□□□ -2.3
USP47Q96K76 RNU2-64P-201ENST00000411315 191 ntBASIC0.71□□□□□ -2.3
USP47Q96K76 MTND1P1-201ENST00000445453 368 ntBASIC0.71□□□□□ -2.3
USP47Q96K76 RNU7-21P-201ENST00000459430 62 ntBASIC0.71□□□□□ -2.3
USP47Q96K76 Y_RNA.706-201ENST00000516933 99 ntBASIC0.71□□□□□ -2.3
USP47Q96K76 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.71□□□□□ -2.3
USP47Q96K76 AP002004.2-201ENST00000531656 154 ntBASIC0.71□□□□□ -2.3
USP47Q96K76 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.71□□□□□ -2.3
USP47Q96K76 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.71□□□□□ -2.3
USP47Q96K76 ZNF299P-201ENST00000406845 1804 ntBASIC0.71□□□□□ -2.3
USP47Q96K76 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
USP47Q96K76 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
USP47Q96K76 MIRLET7C-201ENST00000362160 84 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 Y_RNA.106-201ENST00000363189 100 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 RNA5SP511-201ENST00000410487 115 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 AC006461.1-201ENST00000412637 326 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 RPS3AP1-201ENST00000413190 320 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.7□□□□□ -2.3
USP47Q96K76 USP9YP16-201ENST00000430287 407 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 RPS20P10-201ENST00000451209 253 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 AC233266.1-201ENST00000454518 96 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 USP9YP23-201ENST00000455085 407 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 AL049830.1-201ENST00000468034 425 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 AC046134.1-201ENST00000514454 666 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 RNU6-1116P-201ENST00000517269 99 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 AC242852.1-201ENST00000612151 96 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 MIR2909-201ENST00000617113 69 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 AC244015.1-201ENST00000622301 99 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
USP47Q96K76 SNORA27.1-201ENST00000362604 124 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 RNU6-1059P-201ENST00000363752 98 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 RNU6-1090P-201ENST00000364065 94 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 RNU6-136P-201ENST00000384663 107 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 MIR605-201ENST00000385078 83 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 MIR100-201ENST00000385259 80 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 ELOCP21-201ENST00000412558 336 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 AC018865.2-201ENST00000423631 129 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.7□□□□□ -2.3
USP47Q96K76 Z98949.2-201ENST00000440996 144 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 RNU7-90P-201ENST00000459216 62 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.7□□□□□ -2.3
USP47Q96K76 RNU6-314P-201ENST00000516574 104 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 AC090617.3-201ENST00000573670 475 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 AC100812.1-201ENST00000607622 580 ntBASIC0.7□□□□□ -2.3
USP47Q96K76 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
USP47Q96K76 MTND5P16-201ENST00000460269 1703 ntBASIC0.69□□□□□ -2.3
USP47Q96K76 AC073544.1-201ENST00000600110 1595 ntBASIC0.69□□□□□ -2.3
USP47Q96K76 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
USP47Q96K76 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.69□□□□□ -2.3
USP47Q96K76 SNORA75.2-201ENST00000391138 150 ntBASIC0.69□□□□□ -2.3
USP47Q96K76 SNORA75.3-201ENST00000391231 150 ntBASIC0.69□□□□□ -2.3
USP47Q96K76 RNU2-16P-201ENST00000410712 136 ntBASIC0.69□□□□□ -2.3
USP47Q96K76 RNU6-1001P-201ENST00000411265 100 ntBASIC0.69□□□□□ -2.3
USP47Q96K76 USP9YP30-201ENST00000430729 455 ntBASIC0.69□□□□□ -2.3
USP47Q96K76 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.69□□□□□ -2.3
USP47Q96K76 MTCO2P7-201ENST00000446518 666 ntBASIC0.69□□□□□ -2.3
USP47Q96K76 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.69□□□□□ -2.3
USP47Q96K76 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.69□□□□□ -2.3
USP47Q96K76 MIR3684-201ENST00000579779 74 ntBASIC0.69□□□□□ -2.3
USP47Q96K76 AF250324.2-201ENST00000608299 610 ntBASIC0.69□□□□□ -2.3
USP47Q96K76 AL096861.1-201ENST00000610899 123 ntBASIC0.69□□□□□ -2.3
USP47Q96K76 AC243829.6-201ENST00000612652 106 ntBASIC0.69□□□□□ -2.3
USP47Q96K76 RNA5SP361-201ENST00000362686 118 ntBASIC0.68□□□□□ -2.3
USP47Q96K76 Y_RNA.490-201ENST00000384413 102 ntBASIC0.68□□□□□ -2.3
USP47Q96K76 MIR329-1-201ENST00000385028 80 ntBASIC0.68□□□□□ -2.3
USP47Q96K76 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.68□□□□□ -2.3
USP47Q96K76 RPEP5-201ENST00000441137 268 ntBASIC0.68□□□□□ -2.3
USP47Q96K76 UQCRBP2-201ENST00000447827 297 ntBASIC0.68□□□□□ -2.3
USP47Q96K76 MTND1P29-201ENST00000448112 647 ntBASIC0.68□□□□□ -2.3
USP47Q96K76 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.68□□□□□ -2.3
USP47Q96K76 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.68□□□□□ -2.3
USP47Q96K76 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.68□□□□□ -2.3
USP47Q96K76 RNU11-2P-201ENST00000516898 142 ntBASIC0.68□□□□□ -2.3
USP47Q96K76 AC004832.4-201ENST00000608952 331 ntBASIC0.68□□□□□ -2.3
USP47Q96K76 AC090617.10-201ENST00000624308 134 ntBASIC0.68□□□□□ -2.3
USP47Q96K76 RNU6-1264P-201ENST00000383891 107 ntBASIC0.67□□□□□ -2.3
USP47Q96K76 RNU6-842P-201ENST00000384269 107 ntBASIC0.67□□□□□ -2.3
USP47Q96K76 SNORD116-13-201ENST00000384408 92 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 191 ms